RNA–Protein interactions for RNA: ENST00000528201.1

PACSIN3-204, Transcript of protein kinase C and casein kinase substrate in neurons 3, humanhuman

TSL 3

Gene PACSIN3, Length 864 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACSIN3-204ENST00000528201 C12orf60Q5U649 245 aa28.84■■■□□ 2.21
PACSIN3-204ENST00000528201 ZSCAN25Q6NSZ9 544 aa28.84■■■□□ 2.21
PACSIN3-204ENST00000528201 PI4K2BQ8TCG2 481 aa28.84■■■□□ 2.21
PACSIN3-204ENST00000528201 OSBP2Q969R2 916 aa28.84■■■□□ 2.21
PACSIN3-204ENST00000528201 GJD2Q9UKL4 321 aa28.84■■■□□ 2.21
PACSIN3-204ENST00000528201 MGAMO43451 1857 aa28.84■■■□□ 2.21
PACSIN3-204ENST00000528201 A0A1W2PRG0 241 aa28.83■■■□□ 2.21
PACSIN3-204ENST00000528201 COA7Q96BR5 231 aa28.83■■■□□ 2.21
PACSIN3-204ENST00000528201 STRBPQ96SI9 672 aaKnown RBP28.83■■■□□ 2.21
PACSIN3-204ENST00000528201 BIN2Q9UBW5 565 aaPredicted RBP28.83■■■□□ 2.21
PACSIN3-204ENST00000528201 MPHOSPH10O00566 681 aaKnown RBP28.82■■■□□ 2.2
PACSIN3-204ENST00000528201 VCAM1P19320 739 aa28.82■■■□□ 2.2
PACSIN3-204ENST00000528201 Q3C1V9 767 aa28.82■■■□□ 2.2
PACSIN3-204ENST00000528201 PRPF38BQ5VTL8 546 aaKnown RBP28.82■■■□□ 2.2
PACSIN3-204ENST00000528201 CLEC10AQ8IUN9 316 aa28.82■■■□□ 2.2
PACSIN3-204ENST00000528201 UNC93B1Q9H1C4 597 aa28.82■■■□□ 2.2
PACSIN3-204ENST00000528201 INHAP05111 366 aa28.81■■■□□ 2.2
PACSIN3-204ENST00000528201 AKR1B1P15121 316 aa28.81■■■□□ 2.2
PACSIN3-204ENST00000528201 CTR9Q6PD62 1173 aa28.81■■■□□ 2.2
PACSIN3-204ENST00000528201 SIAH1Q8IUQ4 282 aa28.81■■■□□ 2.2
PACSIN3-204ENST00000528201 GPRC5AQ8NFJ5 357 aa28.81■■■□□ 2.2
PACSIN3-204ENST00000528201 PXYLP1Q8TE99 480 aa28.81■■■□□ 2.2
PACSIN3-204ENST00000528201 SWAP70Q9UH65 585 aa28.81■■■□□ 2.2
PACSIN3-204ENST00000528201 TAOK2Q9UL54 1235 aa28.81■■■□□ 2.2
PACSIN3-204ENST00000528201 SALL3Q9BXA9 1300 aa28.8■■■□□ 2.2
PACSIN3-204ENST00000528201 CNMDO75829 334 aa28.8■■■□□ 2.2
PACSIN3-204ENST00000528201 USP14P54578 494 aa28.8■■■□□ 2.2
PACSIN3-204ENST00000528201 TTC41PQ6P2S7 1318 aa28.79■■■□□ 2.2
PACSIN3-204ENST00000528201 USP17L15C9J2P7 530 aa28.79■■■□□ 2.2
PACSIN3-204ENST00000528201 USP17L13C9JLJ4 530 aa28.79■■■□□ 2.2
PACSIN3-204ENST00000528201 USP17L11C9JVI0 530 aa28.79■■■□□ 2.2
PACSIN3-204ENST00000528201 USP17L18D6R9N7 530 aa28.79■■■□□ 2.2
PACSIN3-204ENST00000528201 USP17L22D6RA61 530 aa28.79■■■□□ 2.2
PACSIN3-204ENST00000528201 USP17L17D6RBQ6 530 aa28.79■■■□□ 2.2
PACSIN3-204ENST00000528201 USP17L19D6RCP7 530 aa28.79■■■□□ 2.2
PACSIN3-204ENST00000528201 USP17L20D6RJB6 530 aa28.79■■■□□ 2.2
PACSIN3-204ENST00000528201 RNF113AO15541 343 aaKnown RBP28.79■■■□□ 2.2
PACSIN3-204ENST00000528201 CDK8P49336 464 aa28.79■■■□□ 2.2
PACSIN3-204ENST00000528201 UBXN2AP68543 259 aa28.79■■■□□ 2.2
PACSIN3-204ENST00000528201 USP17L24Q0WX57 530 aa28.79■■■□□ 2.2
PACSIN3-204ENST00000528201 KIAA1755Q5JYT7 1200 aa28.79■■■□□ 2.2
PACSIN3-204ENST00000528201 CATSPERGQ6ZRH7 1159 aa28.79■■■□□ 2.2
PACSIN3-204ENST00000528201 TMEM179Q6ZVK1 233 aa28.79■■■□□ 2.2
PACSIN3-204ENST00000528201 C16orf86Q6ZW13 317 aa28.79■■■□□ 2.2
PACSIN3-204ENST00000528201 APPBP2Q92624 585 aa28.79■■■□□ 2.2
PACSIN3-204ENST00000528201 PAGR1Q9BTK6 254 aa28.79■■■□□ 2.2
PACSIN3-204ENST00000528201 RNF208Q9H0X6 261 aa28.79■■■□□ 2.2
PACSIN3-204ENST00000528201 PORCNQ9H237 461 aa28.79■■■□□ 2.2
PACSIN3-204ENST00000528201 GSG1L2A8MUP6 293 aa28.78■■■□□ 2.2
PACSIN3-204ENST00000528201 GJB1P08034 283 aa28.78■■■□□ 2.2
PACSIN3-204ENST00000528201 ERVK-9P63128 1117 aa28.78■■■□□ 2.2
PACSIN3-204ENST00000528201 ERVK-24P63145 666 aa28.78■■■□□ 2.2
PACSIN3-204ENST00000528201 RPAP3Q9H6T3 665 aaPredicted RBP28.78■■■□□ 2.2
PACSIN3-204ENST00000528201 M0R2C6 588 aa28.77■■■□□ 2.2
PACSIN3-204ENST00000528201 GJA8P48165 433 aa28.77■■■□□ 2.2
PACSIN3-204ENST00000528201 DOCK3Q8IZD9 2030 aa28.77■■■□□ 2.2
PACSIN3-204ENST00000528201 EPB41L4AQ9HCS5 686 aaPredicted RBP28.76■■■□□ 2.19
PACSIN3-204ENST00000528201 GPAA1O43292 621 aa28.75■■■□□ 2.19
PACSIN3-204ENST00000528201 GLRX3O76003 335 aaKnown RBP28.75■■■□□ 2.19
PACSIN3-204ENST00000528201 MX1P20591 662 aa28.75■■■□□ 2.19
PACSIN3-204ENST00000528201 HDAC1Q13547 482 aaPredicted RBP28.75■■■□□ 2.19
PACSIN3-204ENST00000528201 GTF3C2Q8WUA4 911 aaPredicted RBP28.75■■■□□ 2.19
PACSIN3-204ENST00000528201 DDRGK1Q96HY6 314 aa28.75■■■□□ 2.19
PACSIN3-204ENST00000528201 MYH7P12883 1935 aa28.75■■■□□ 2.19
PACSIN3-204ENST00000528201 BAZ2AQ9UIF9 1905 aaKnown RBP28.75■■■□□ 2.19
PACSIN3-204ENST00000528201 ZFYP08048 801 aaPredicted RBP28.74■■■□□ 2.19
PACSIN3-204ENST00000528201 TRIM32Q13049 653 aa28.74■■■□□ 2.19
PACSIN3-204ENST00000528201 ANKRD45Q5TZF3 282 aa28.74■■■□□ 2.19
PACSIN3-204ENST00000528201 UBE2Q1Q7Z7E8 422 aa28.74■■■□□ 2.19
PACSIN3-204ENST00000528201 SEC62Q99442 399 aaKnown RBP28.74■■■□□ 2.19
PACSIN3-204ENST00000528201 BTBD7Q9P203 1132 aa28.74■■■□□ 2.19
PACSIN3-204ENST00000528201 RABGAP1Q9Y3P9 1069 aa28.74■■■□□ 2.19
PACSIN3-204ENST00000528201 SPDYE16A6NNV3 312 aaPredicted RBP28.73■■■□□ 2.19
PACSIN3-204ENST00000528201 ERC2O15083 957 aa28.73■■■□□ 2.19
PACSIN3-204ENST00000528201 ICA1Q05084 483 aa28.73■■■□□ 2.19
PACSIN3-204ENST00000528201 AMOTL1Q8IY63 956 aa28.73■■■□□ 2.19
PACSIN3-204ENST00000528201 U2AF1L4Q8WU68 220 aaKnown RBP28.73■■■□□ 2.19
PACSIN3-204ENST00000528201 CCDC17Q96LX7 622 aa28.73■■■□□ 2.19
PACSIN3-204ENST00000528201 GNL3Q9BVP2 549 aaKnown RBP eCLIP28.73■■■□□ 2.19
PACSIN3-204ENST00000528201 ARPP21Q9UBL0 812 aaPredicted RBP28.73■■■□□ 2.19
PACSIN3-204ENST00000528201 CYP2B6P20813 491 aa28.72■■■□□ 2.19
PACSIN3-204ENST00000528201 SBK1Q52WX2 424 aa28.72■■■□□ 2.19
PACSIN3-204ENST00000528201 LBX2Q6XYB7 198 aa28.72■■■□□ 2.19
PACSIN3-204ENST00000528201 USP6NLQ92738 828 aa28.72■■■□□ 2.19
PACSIN3-204ENST00000528201 MAPK4P31152 587 aa28.71■■■□□ 2.19
PACSIN3-204ENST00000528201 GIMAP6Q6P9H5 292 aa28.71■■■□□ 2.19
PACSIN3-204ENST00000528201 GPR142Q7Z601 462 aa28.71■■■□□ 2.19
PACSIN3-204ENST00000528201 NKX2-3Q8TAU0 364 aa28.71■■■□□ 2.19
PACSIN3-204ENST00000528201 TRIB2Q92519 343 aa28.71■■■□□ 2.19
PACSIN3-204ENST00000528201 PAK6Q9NQU5 681 aaPredicted RBP28.71■■■□□ 2.19
PACSIN3-204ENST00000528201 TMX2Q9Y320 296 aa28.71■■■□□ 2.19
PACSIN3-204ENST00000528201 HMGCRP04035 888 aa28.7■■■□□ 2.18
PACSIN3-204ENST00000528201 MORN1Q5T089 497 aa28.7■■■□□ 2.18
PACSIN3-204ENST00000528201 SPICE1Q8N0Z3 855 aa28.7■■■□□ 2.18
PACSIN3-204ENST00000528201 STK11IPQ8N1F8 1099 aa28.7■■■□□ 2.18
PACSIN3-204ENST00000528201 PLXNB2O15031 1838 aa28.7■■■□□ 2.18
PACSIN3-204ENST00000528201 SGPL1O95470 568 aa28.69■■■□□ 2.18
PACSIN3-204ENST00000528201 PLEKHH3Q7Z736 793 aa28.69■■■□□ 2.18
PACSIN3-204ENST00000528201 SOCS4Q8WXH5 440 aa28.69■■■□□ 2.18
PACSIN3-204ENST00000528201 GCC1Q96CN9 775 aa28.69■■■□□ 2.18
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms