RNA–Protein interactions for RNA: ENST00000527920.5

SSSCA1-205, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 3 BASIC

Gene SSSCA1, Length 806 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-205ENST00000527920 BAZ2AQ9UIF9 1905 aaKnown RBP39.64■■■■□ 3.94
SSSCA1-205ENST00000527920 GSG1L2A8MUP6 293 aa39.64■■■■□ 3.94
SSSCA1-205ENST00000527920 GPAA1O43292 621 aa39.64■■■■□ 3.94
SSSCA1-205ENST00000527920 SEPT2Q15019 361 aa39.64■■■■□ 3.94
SSSCA1-205ENST00000527920 SBK1Q52WX2 424 aa39.64■■■■□ 3.94
SSSCA1-205ENST00000527920 GTF3C2Q8WUA4 911 aaPredicted RBP39.64■■■■□ 3.94
SSSCA1-205ENST00000527920 FSD1Q9BTV5 496 aa39.64■■■■□ 3.94
SSSCA1-205ENST00000527920 ECM2O94769 699 aaPredicted RBP39.63■■■■□ 3.93
SSSCA1-205ENST00000527920 PDE1AP54750 535 aa39.63■■■■□ 3.93
SSSCA1-205ENST00000527920 RAET1EQ8TD07 263 aa39.63■■■■□ 3.93
SSSCA1-205ENST00000527920 ACER1Q8TDN7 264 aa39.63■■■■□ 3.93
SSSCA1-205ENST00000527920 SUPT16HQ9Y5B9 1047 aaKnown RBP39.63■■■■□ 3.93
SSSCA1-205ENST00000527920 CYP2D7A0A087X1C5 515 aa39.62■■■■□ 3.93
SSSCA1-205ENST00000527920 MPHOSPH10O00566 681 aaKnown RBP39.62■■■■□ 3.93
SSSCA1-205ENST00000527920 CDK8P49336 464 aa39.62■■■■□ 3.93
SSSCA1-205ENST00000527920 PRKCZQ05513 592 aa39.62■■■■□ 3.93
SSSCA1-205ENST00000527920 P2RX7Q99572 595 aaKnown RBP39.62■■■■□ 3.93
SSSCA1-205ENST00000527920 TNPO2O14787 897 aaKnown RBP39.61■■■■□ 3.93
SSSCA1-205ENST00000527920 HERVK_113P62684 666 aa39.61■■■■□ 3.93
SSSCA1-205ENST00000527920 MGAMO43451 1857 aa39.6■■■■□ 3.93
SSSCA1-205ENST00000527920 KIAA0100Q14667 2235 aaKnown RBP39.59■■■■□ 3.93
SSSCA1-205ENST00000527920 USP17L15C9J2P7 530 aa39.59■■■■□ 3.93
SSSCA1-205ENST00000527920 USP17L13C9JLJ4 530 aa39.59■■■■□ 3.93
SSSCA1-205ENST00000527920 USP17L11C9JVI0 530 aa39.59■■■■□ 3.93
SSSCA1-205ENST00000527920 USP17L18D6R9N7 530 aa39.59■■■■□ 3.93
SSSCA1-205ENST00000527920 USP17L22D6RA61 530 aa39.59■■■■□ 3.93
SSSCA1-205ENST00000527920 USP17L17D6RBQ6 530 aa39.59■■■■□ 3.93
SSSCA1-205ENST00000527920 USP17L19D6RCP7 530 aa39.59■■■■□ 3.93
SSSCA1-205ENST00000527920 USP17L20D6RJB6 530 aa39.59■■■■□ 3.93
SSSCA1-205ENST00000527920 M0R2C6 588 aa39.59■■■■□ 3.93
SSSCA1-205ENST00000527920 USP17L24Q0WX57 530 aa39.59■■■■□ 3.93
SSSCA1-205ENST00000527920 ZYXQ15942 572 aaKnown RBP39.59■■■■□ 3.93
SSSCA1-205ENST00000527920 ZMYM1Q5SVZ6 1142 aa39.59■■■■□ 3.93
SSSCA1-205ENST00000527920 TICAM2Q86XR7 235 aa39.59■■■■□ 3.93
SSSCA1-205ENST00000527920 SH3TC2Q8TF17 1288 aa39.59■■■■□ 3.93
SSSCA1-205ENST00000527920 RBBP6Q7Z6E9 1792 aaKnown RBP39.59■■■■□ 3.93
SSSCA1-205ENST00000527920 ROBO3Q96MS0 1386 aa39.59■■■■□ 3.93
SSSCA1-205ENST00000527920 SMIM22K7EJ46 135 aa39.58■■■■□ 3.93
SSSCA1-205ENST00000527920 VCAM1P19320 739 aa39.58■■■■□ 3.93
SSSCA1-205ENST00000527920 GRK4P32298 578 aa39.58■■■■□ 3.93
SSSCA1-205ENST00000527920 COA7Q96BR5 231 aa39.58■■■■□ 3.93
SSSCA1-205ENST00000527920 EVI5LQ96CN4 794 aa39.58■■■■□ 3.93
SSSCA1-205ENST00000527920 AKR1B1P15121 316 aa39.57■■■■□ 3.93
SSSCA1-205ENST00000527920 IRF5Q13568 498 aa39.57■■■■□ 3.93
SSSCA1-205ENST00000527920 TMEM106CQ9BVX2 250 aa39.57■■■■□ 3.93
SSSCA1-205ENST00000527920 POTEFA5A3E0 1075 aa39.56■■■■□ 3.92
SSSCA1-205ENST00000527920 SLAIN1Q8ND83 568 aa39.56■■■■□ 3.92
SSSCA1-205ENST00000527920 LNPKQ9C0E8 428 aa39.56■■■■□ 3.92
SSSCA1-205ENST00000527920 EPB41L4AQ9HCS5 686 aaPredicted RBP39.56■■■■□ 3.92
SSSCA1-205ENST00000527920 GABRQQ9UN88 632 aa39.56■■■■□ 3.92
SSSCA1-205ENST00000527920 A0A1W2PRG0 241 aa39.55■■■■□ 3.92
SSSCA1-205ENST00000527920 IGHDP01880 384 aa39.55■■■■□ 3.92
SSSCA1-205ENST00000527920 FLT3LGP49771 235 aa39.55■■■■□ 3.92
SSSCA1-205ENST00000527920 CATSPERGQ6ZRH7 1159 aa39.55■■■■□ 3.92
SSSCA1-205ENST00000527920 PATL2C9JE40 543 aaKnown RBP39.54■■■■□ 3.92
SSSCA1-205ENST00000527920 GPRC5AQ8NFJ5 357 aa39.54■■■■□ 3.92
SSSCA1-205ENST00000527920 SH2D4AQ9H788 454 aa39.54■■■■□ 3.92
SSSCA1-205ENST00000527920 NUCB1Q02818 461 aa39.53■■■■□ 3.92
SSSCA1-205ENST00000527920 ICA1Q05084 483 aa39.53■■■■□ 3.92
SSSCA1-205ENST00000527920 CHD1LQ86WJ1 897 aa39.53■■■■□ 3.92
SSSCA1-205ENST00000527920 PXYLP1Q8TE99 480 aa39.53■■■■□ 3.92
SSSCA1-205ENST00000527920 NACAP1Q9BZK3 213 aa39.53■■■■□ 3.92
SSSCA1-205ENST00000527920 ARHGEF10LQ9HCE6 1279 aa39.53■■■■□ 3.92
SSSCA1-205ENST00000527920 TXNRD2Q9NNW7 524 aa39.53■■■■□ 3.92
SSSCA1-205ENST00000527920 RBPJLQ9UBG7 517 aa39.53■■■■□ 3.92
SSSCA1-205ENST00000527920 MYH8P13535 1937 aa39.53■■■■□ 3.92
SSSCA1-205ENST00000527920 TDO2P48775 406 aa39.52■■■■□ 3.92
SSSCA1-205ENST00000527920 LBX2Q6XYB7 198 aa39.52■■■■□ 3.92
SSSCA1-205ENST00000527920 SEC62Q99442 399 aaKnown RBP39.52■■■■□ 3.92
SSSCA1-205ENST00000527920 SIAH1Q8IUQ4 282 aa39.51■■■■□ 3.92
SSSCA1-205ENST00000527920 LPAR1Q92633 364 aa39.51■■■■□ 3.92
SSSCA1-205ENST00000527920 TMX2Q9Y320 296 aa39.51■■■■□ 3.92
SSSCA1-205ENST00000527920 ERVK-9P63128 1117 aa39.5■■■■□ 3.91
SSSCA1-205ENST00000527920 ERVK-24P63145 666 aa39.5■■■■□ 3.91
SSSCA1-205ENST00000527920 IFNL3Q8IZI9 196 aa39.5■■■■□ 3.91
SSSCA1-205ENST00000527920 RPAP3Q9H6T3 665 aaPredicted RBP39.5■■■■□ 3.91
SSSCA1-205ENST00000527920 KANSL2Q9H9L4 492 aa39.5■■■■□ 3.91
SSSCA1-205ENST00000527920 RABGAP1Q9Y3P9 1069 aa39.5■■■■□ 3.91
SSSCA1-205ENST00000527920 ADCY3O60266 1144 aa39.49■■■■□ 3.91
SSSCA1-205ENST00000527920 APPP05067 770 aa39.49■■■■□ 3.91
SSSCA1-205ENST00000527920 POTEEQ6S8J3 1075 aa39.49■■■■□ 3.91
SSSCA1-205ENST00000527920 BRCA2P51587 3418 aa39.49■■■■□ 3.91
SSSCA1-205ENST00000527920 MINDY4BA8MYZ0 360 aa39.48■■■■□ 3.91
SSSCA1-205ENST00000527920 B4GALNT3Q6L9W6 998 aa39.48■■■■□ 3.91
SSSCA1-205ENST00000527920 OSBPL3Q9H4L5 887 aa39.48■■■■□ 3.91
SSSCA1-205ENST00000527920 ZNF287Q9HBT7 754 aa39.48■■■■□ 3.91
SSSCA1-205ENST00000527920 RASA1P20936 1047 aa39.47■■■■□ 3.91
SSSCA1-205ENST00000527920 MAPK4P31152 587 aa39.47■■■■□ 3.91
SSSCA1-205ENST00000527920 UBXN2AP68543 259 aa39.47■■■■□ 3.91
SSSCA1-205ENST00000527920 GJD2Q9UKL4 321 aa39.47■■■■□ 3.91
SSSCA1-205ENST00000527920 CLEC10AQ8IUN9 316 aa39.46■■■■□ 3.91
SSSCA1-205ENST00000527920 VCPKMTQ9H867 229 aa39.46■■■■□ 3.91
SSSCA1-205ENST00000527920 MKNK2Q9HBH9 465 aa39.46■■■■□ 3.91
SSSCA1-205ENST00000527920 PAGR1Q9BTK6 254 aa39.45■■■■□ 3.91
SSSCA1-205ENST00000527920 EN2P19622 333 aaPredicted RBP39.44■■■■□ 3.9
SSSCA1-205ENST00000527920 GNL3Q9BVP2 549 aaKnown RBP eCLIP39.44■■■■□ 3.9
SSSCA1-205ENST00000527920 HELLSQ9NRZ9 838 aa39.44■■■■□ 3.9
SSSCA1-205ENST00000527920 BIN2Q9UBW5 565 aaPredicted RBP39.44■■■■□ 3.9
SSSCA1-205ENST00000527920 PDE4DIPQ5VU43 2346 aa39.43■■■■□ 3.9
SSSCA1-205ENST00000527920 SPDYE16A6NNV3 312 aaPredicted RBP39.43■■■■□ 3.9
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms