RNA–Protein interactions for RNA: ENST00000527624.1

PCDHA6-202, Transcript of protocadherin alpha 6, humanhuman

TSL 1 (best) BASIC

Gene PCDHA6, Length 2,231 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA6-202ENST00000527624 PTPAQ15257 358 aa19.95■□□□□ 0.78
PCDHA6-202ENST00000527624 CERS3Q8IU89 383 aa19.95■□□□□ 0.78
PCDHA6-202ENST00000527624 FAM163AQ96GL9 167 aaPredicted RBP19.95■□□□□ 0.78
PCDHA6-202ENST00000527624 ZNF219Q9P2Y4 722 aaPredicted RBP19.95■□□□□ 0.78
PCDHA6-202ENST00000527624 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP19.95■□□□□ 0.78
PCDHA6-202ENST00000527624 PRPF3O43395 683 aaKnown RBP19.94■□□□□ 0.78
PCDHA6-202ENST00000527624 TSPY3P0CV98 308 aa19.94■□□□□ 0.78
PCDHA6-202ENST00000527624 TSPY8P0CW00 308 aa19.94■□□□□ 0.78
PCDHA6-202ENST00000527624 SRBD1Q8N5C6 995 aaKnown RBP19.94■□□□□ 0.78
PCDHA6-202ENST00000527624 FAM200AQ8TCP9 573 aa19.94■□□□□ 0.78
PCDHA6-202ENST00000527624 PIBF1Q8WXW3 757 aa19.94■□□□□ 0.78
PCDHA6-202ENST00000527624 ERCC4Q92889 916 aaPredicted RBP19.94■□□□□ 0.78
PCDHA6-202ENST00000527624 KAT14Q9H8E8 782 aa19.94■□□□□ 0.78
PCDHA6-202ENST00000527624 NAV1Q8NEY1 1877 aa19.94■□□□□ 0.78
PCDHA6-202ENST00000527624 DLEC1Q9Y238 1755 aa19.94■□□□□ 0.78
PCDHA6-202ENST00000527624 GOLGB1Q14789 3259 aaKnown RBP19.94■□□□□ 0.78
PCDHA6-202ENST00000527624 G3V3G9 751 aa19.94■□□□□ 0.78
PCDHA6-202ENST00000527624 DCAF8Q5TAQ9 597 aa19.94■□□□□ 0.78
PCDHA6-202ENST00000527624 ZNF444Q8N0Y2 327 aaPredicted RBP19.94■□□□□ 0.78
PCDHA6-202ENST00000527624 FOXP1Q9H334 677 aaPredicted RBP19.94■□□□□ 0.78
PCDHA6-202ENST00000527624 RASA1P20936 1047 aa19.93■□□□□ 0.78
PCDHA6-202ENST00000527624 LUZP1Q86V48 1076 aa19.93■□□□□ 0.78
PCDHA6-202ENST00000527624 CNTNAP5Q8WYK1 1306 aa19.93■□□□□ 0.78
PCDHA6-202ENST00000527624 CTAGE5O15320 804 aa19.92■□□□□ 0.78
PCDHA6-202ENST00000527624 CHRNA5P30532 468 aa19.92■□□□□ 0.78
PCDHA6-202ENST00000527624 TOB1P50616 345 aaPredicted RBP19.92■□□□□ 0.78
PCDHA6-202ENST00000527624 SLC15A2Q16348 729 aa19.92■□□□□ 0.78
PCDHA6-202ENST00000527624 DNAJC25Q9H1X3 360 aa19.92■□□□□ 0.78
PCDHA6-202ENST00000527624 TTF2Q9UNY4 1162 aaKnown RBP19.92■□□□□ 0.78
PCDHA6-202ENST00000527624 H0YIN7 160 aa19.92■□□□□ 0.78
PCDHA6-202ENST00000527624 PFKFB1P16118 471 aa19.92■□□□□ 0.78
PCDHA6-202ENST00000527624 SCNN1DP51172 638 aa19.92■□□□□ 0.78
PCDHA6-202ENST00000527624 PICALMQ13492 652 aa19.92■□□□□ 0.78
PCDHA6-202ENST00000527624 DGKHQ86XP1 1220 aa19.92■□□□□ 0.78
PCDHA6-202ENST00000527624 PNMA1Q8ND90 353 aa19.92■□□□□ 0.78
PCDHA6-202ENST00000527624 DBNDD1Q9H9R9 158 aa19.92■□□□□ 0.78
PCDHA6-202ENST00000527624 MTMR7Q9Y216 660 aa19.92■□□□□ 0.78
PCDHA6-202ENST00000527624 A0A087WWV3 80 aa19.91■□□□□ 0.78
PCDHA6-202ENST00000527624 TPM2P07951 284 aa19.91■□□□□ 0.78
PCDHA6-202ENST00000527624 XBP1P17861 261 aa19.91■□□□□ 0.78
PCDHA6-202ENST00000527624 ATP2B1P20020 1258 aa19.91■□□□□ 0.78
PCDHA6-202ENST00000527624 CDK8P49336 464 aa19.91■□□□□ 0.78
PCDHA6-202ENST00000527624 TERF1P54274 439 aa19.91■□□□□ 0.78
PCDHA6-202ENST00000527624 JMYQ8N9B5 988 aa19.91■□□□□ 0.78
PCDHA6-202ENST00000527624 CLIC6Q96NY7 704 aa19.91■□□□□ 0.78
PCDHA6-202ENST00000527624 SDF4Q9BRK5 362 aa19.91■□□□□ 0.78
PCDHA6-202ENST00000527624 CBX8Q9HC52 389 aa19.91■□□□□ 0.78
PCDHA6-202ENST00000527624 AP5Z1O43299 807 aa19.91■□□□□ 0.78
PCDHA6-202ENST00000527624 PPP6R2O75170 966 aa19.91■□□□□ 0.78
PCDHA6-202ENST00000527624 CMA1P23946 247 aa19.91■□□□□ 0.78
PCDHA6-202ENST00000527624 CAMKK2Q96RR4 588 aa19.91■□□□□ 0.78
PCDHA6-202ENST00000527624 KCNQ5Q9NR82 932 aa19.91■□□□□ 0.78
PCDHA6-202ENST00000527624 STX8Q9UNK0 236 aa19.91■□□□□ 0.78
PCDHA6-202ENST00000527624 C16orf86Q6ZW13 317 aa19.9■□□□□ 0.78
PCDHA6-202ENST00000527624 PHF20Q9BVI0 1012 aa19.9■□□□□ 0.78
PCDHA6-202ENST00000527624 CABP5Q9NP86 173 aa19.9■□□□□ 0.78
PCDHA6-202ENST00000527624 FAM205CA6NFA0 338 aa19.9■□□□□ 0.78
PCDHA6-202ENST00000527624 KIAA2012Q0VF49 1180 aa19.9■□□□□ 0.78
PCDHA6-202ENST00000527624 SHC4Q6S5L8 630 aa19.9■□□□□ 0.78
PCDHA6-202ENST00000527624 EYA3Q99504 573 aa19.9■□□□□ 0.78
PCDHA6-202ENST00000527624 STK32BQ9NY57 414 aa19.9■□□□□ 0.78
PCDHA6-202ENST00000527624 ZNF202O95125 648 aa19.89■□□□□ 0.77
PCDHA6-202ENST00000527624 KIF5BP33176 963 aa19.89■□□□□ 0.77
PCDHA6-202ENST00000527624 RILPL1Q5EBL4 403 aa19.89■□□□□ 0.77
PCDHA6-202ENST00000527624 STAG2Q8N3U4 1231 aa19.89■□□□□ 0.77
PCDHA6-202ENST00000527624 ZNF287Q9HBT7 754 aa19.89■□□□□ 0.77
PCDHA6-202ENST00000527624 SUGT1Q9Y2Z0 365 aa19.89■□□□□ 0.77
PCDHA6-202ENST00000527624 PCDHB6Q9Y5E3 794 aa19.89■□□□□ 0.77
PCDHA6-202ENST00000527624 CDK5RAP2Q96SN8 1893 aa19.89■□□□□ 0.77
PCDHA6-202ENST00000527624 VEGFAP15692 232 aaPredicted RBP19.88■□□□□ 0.77
PCDHA6-202ENST00000527624 KRT2P35908 639 aa19.88■□□□□ 0.77
PCDHA6-202ENST00000527624 ZNF165P49910 485 aa19.88■□□□□ 0.77
PCDHA6-202ENST00000527624 STYK1Q6J9G0 422 aa19.88■□□□□ 0.77
PCDHA6-202ENST00000527624 ANKS1AQ92625 1134 aa19.88■□□□□ 0.77
PCDHA6-202ENST00000527624 SNED1Q8TER0 1413 aa19.88■□□□□ 0.77
PCDHA6-202ENST00000527624 BAZ2BQ9UIF8 2168 aaKnown RBP19.88■□□□□ 0.77
PCDHA6-202ENST00000527624 MYH6P13533 1939 aa19.88■□□□□ 0.77
PCDHA6-202ENST00000527624 EARS2Q5JPH6 523 aaKnown RBP19.88■□□□□ 0.77
PCDHA6-202ENST00000527624 C11orf57Q6ZUT1 292 aaPredicted RBP19.88■□□□□ 0.77
PCDHA6-202ENST00000527624 ZNF830Q96NB3 372 aaPredicted RBP19.88■□□□□ 0.77
PCDHA6-202ENST00000527624 EIF4ENIF1Q9NRA8 985 aaKnown RBP19.88■□□□□ 0.77
PCDHA6-202ENST00000527624 TCP11L1Q9NUJ3 509 aa19.88■□□□□ 0.77
PCDHA6-202ENST00000527624 SCG2P13521 617 aa19.87■□□□□ 0.77
PCDHA6-202ENST00000527624 NT5C2P49902 561 aa19.87■□□□□ 0.77
PCDHA6-202ENST00000527624 STX1AQ16623 288 aa19.87■□□□□ 0.77
PCDHA6-202ENST00000527624 TMEM47Q9BQJ4 181 aa19.87■□□□□ 0.77
PCDHA6-202ENST00000527624 PDGFDQ9GZP0 370 aaPredicted RBP19.87■□□□□ 0.77
PCDHA6-202ENST00000527624 DDX4Q9NQI0 724 aaKnown RBP19.87■□□□□ 0.77
PCDHA6-202ENST00000527624 DDX60LQ5H9U9 1706 aaKnown RBP19.87■□□□□ 0.77
PCDHA6-202ENST00000527624 CCDC178Q5BJE1 867 aa19.87■□□□□ 0.77
PCDHA6-202ENST00000527624 RASGRP2Q7LDG7 609 aa19.87■□□□□ 0.77
PCDHA6-202ENST00000527624 USP40Q9NVE5 1235 aa19.87■□□□□ 0.77
PCDHA6-202ENST00000527624 R3HCC1Q9Y3T6 440 aaKnown RBP19.87■□□□□ 0.77
PCDHA6-202ENST00000527624 SYKP43405 635 aa19.86■□□□□ 0.77
PCDHA6-202ENST00000527624 NOM1Q5C9Z4 860 aaKnown RBP19.86■□□□□ 0.77
PCDHA6-202ENST00000527624 SPECC1Q5M775 1068 aa19.86■□□□□ 0.77
PCDHA6-202ENST00000527624 KRI1Q8N9T8 703 aaKnown RBP19.86■□□□□ 0.77
PCDHA6-202ENST00000527624 TTC12Q9H892 705 aaPredicted RBP19.86■□□□□ 0.77
PCDHA6-202ENST00000527624 RGPD3A6NKT7 1758 aaPredicted RBP19.86■□□□□ 0.77
PCDHA6-202ENST00000527624 RGPD4Q7Z3J3 1758 aa19.86■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms