RNA–Protein interactions for RNA: ENST00000527599.1

CTNND1-217, Transcript of catenin delta 1, humanhuman

TSL 2

Gene CTNND1, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-217ENST00000527599 PI4K2BQ8TCG2 481 aa12.8□□□□□ -0.36
CTNND1-217ENST00000527599 CYB5D2Q8WUJ1 264 aa12.8□□□□□ -0.36
CTNND1-217ENST00000527599 Q96M66 194 aa12.8□□□□□ -0.36
CTNND1-217ENST00000527599 SUPT16HQ9Y5B9 1047 aaKnown RBP12.8□□□□□ -0.36
CTNND1-217ENST00000527599 SLFN12Q8IYM2 578 aa12.79□□□□□ -0.36
CTNND1-217ENST00000527599 LRRN4CLQ8ND94 238 aa12.79□□□□□ -0.36
CTNND1-217ENST00000527599 BRMS1Q9HCU9 246 aa12.79□□□□□ -0.36
CTNND1-217ENST00000527599 H3BS24 57 aa12.78□□□□□ -0.36
CTNND1-217ENST00000527599 FMNL2Q96PY5 1086 aa12.78□□□□□ -0.36
CTNND1-217ENST00000527599 KLHL3Q9UH77 587 aa12.78□□□□□ -0.36
CTNND1-217ENST00000527599 ROBO2Q9HCK4 1378 aa12.78□□□□□ -0.36
CTNND1-217ENST00000527599 PAPLNO95428 1278 aa12.77□□□□□ -0.37
CTNND1-217ENST00000527599 CYP7A1P22680 504 aa12.77□□□□□ -0.37
CTNND1-217ENST00000527599 ETV3P41162 512 aa12.77□□□□□ -0.37
CTNND1-217ENST00000527599 YARSP54577 528 aaKnown RBP12.77□□□□□ -0.37
CTNND1-217ENST00000527599 ZP2Q05996 745 aa12.77□□□□□ -0.37
CTNND1-217ENST00000527599 RC3H2Q9HBD1 1191 aaKnown RBP12.77□□□□□ -0.37
CTNND1-217ENST00000527599 UBP1Q9NZI7 540 aa12.77□□□□□ -0.37
CTNND1-217ENST00000527599 KRTAP9-6A0A140TA67 174 aa12.76□□□□□ -0.37
CTNND1-217ENST00000527599 PAX4O43316 350 aa12.76□□□□□ -0.37
CTNND1-217ENST00000527599 KIR3DL1P43629 444 aa12.76□□□□□ -0.37
CTNND1-217ENST00000527599 SLC23A3Q6PIS1 610 aa12.76□□□□□ -0.37
CTNND1-217ENST00000527599 COX4I2Q96KJ9 171 aa12.76□□□□□ -0.37
CTNND1-217ENST00000527599 FANCCQ00597 558 aa12.75□□□□□ -0.37
CTNND1-217ENST00000527599 CWF19L2Q2TBE0 894 aaKnown RBP12.75□□□□□ -0.37
CTNND1-217ENST00000527599 BAHD1Q8TBE0 780 aaPredicted RBP12.75□□□□□ -0.37
CTNND1-217ENST00000527599 WASH4PA8MWX3 477 aa12.74□□□□□ -0.37
CTNND1-217ENST00000527599 UBE2FQ969M7 185 aa12.74□□□□□ -0.37
CTNND1-217ENST00000527599 BCL11AQ9H165 835 aa12.74□□□□□ -0.37
CTNND1-217ENST00000527599 PCDHB14Q9Y5E9 798 aa12.74□□□□□ -0.37
CTNND1-217ENST00000527599 CARS2Q9HA77 564 aaKnown RBP12.73□□□□□ -0.37
CTNND1-217ENST00000527599 ZSWIM5Q9P217 1185 aa12.73□□□□□ -0.37
CTNND1-217ENST00000527599 RNF114Q9Y508 228 aa12.73□□□□□ -0.37
CTNND1-217ENST00000527599 SLC22A31A6NKX4 558 aa12.72□□□□□ -0.37
CTNND1-217ENST00000527599 LRRN2O75325 713 aa12.72□□□□□ -0.37
CTNND1-217ENST00000527599 ATE1O95260 518 aa12.72□□□□□ -0.37
CTNND1-217ENST00000527599 JUNBP17275 347 aaPredicted RBP12.72□□□□□ -0.37
CTNND1-217ENST00000527599 ZNF76P36508 570 aa12.72□□□□□ -0.37
CTNND1-217ENST00000527599 THAP5Q7Z6K1 395 aa12.72□□□□□ -0.37
CTNND1-217ENST00000527599 PIWIL2Q8TC59 973 aaKnown RBP12.72□□□□□ -0.37
CTNND1-217ENST00000527599 EAF1Q96JC9 268 aaPredicted RBP12.72□□□□□ -0.37
CTNND1-217ENST00000527599 DUSP15Q9H1R2 295 aaPredicted RBP12.72□□□□□ -0.37
CTNND1-217ENST00000527599 LMCD1Q9NZU5 365 aa12.72□□□□□ -0.37
CTNND1-217ENST00000527599 SEZ6Q53EL9 994 aa12.71□□□□□ -0.37
CTNND1-217ENST00000527599 KIF2CQ99661 725 aa12.71□□□□□ -0.37
CTNND1-217ENST00000527599 KRTAP4-12Q9BQ66 201 aa12.71□□□□□ -0.37
CTNND1-217ENST00000527599 EHMT1Q9H9B1 1298 aa12.71□□□□□ -0.37
CTNND1-217ENST00000527599 CARMIL2Q6F5E8 1435 aa12.71□□□□□ -0.38
CTNND1-217ENST00000527599 RECKO95980 971 aa12.7□□□□□ -0.38
CTNND1-217ENST00000527599 CLCQ05315 142 aa12.7□□□□□ -0.38
CTNND1-217ENST00000527599 ATG4DQ86TL0 474 aaPredicted RBP12.7□□□□□ -0.38
CTNND1-217ENST00000527599 DTWD2Q8NBA8 298 aa12.7□□□□□ -0.38
CTNND1-217ENST00000527599 CCDC74BQ96LY2 380 aa12.7□□□□□ -0.38
CTNND1-217ENST00000527599 ZNF394Q53GI3 561 aa12.69□□□□□ -0.38
CTNND1-217ENST00000527599 KREMEN1Q96MU8 473 aa12.69□□□□□ -0.38
CTNND1-217ENST00000527599 NT5C1AQ9BXI3 368 aa12.69□□□□□ -0.38
CTNND1-217ENST00000527599 ESR1P03372 595 aa12.68□□□□□ -0.38
CTNND1-217ENST00000527599 APOBRQ0VD83 1088 aa12.68□□□□□ -0.38
CTNND1-217ENST00000527599 RNF141Q8WVD5 230 aa12.68□□□□□ -0.38
CTNND1-217ENST00000527599 VWCEQ96DN2 955 aa12.68□□□□□ -0.38
CTNND1-217ENST00000527599 PCDHGB7Q9Y5F8 929 aa12.68□□□□□ -0.38
CTNND1-217ENST00000527599 SRFP11831 508 aa12.67□□□□□ -0.38
CTNND1-217ENST00000527599 ARSHQ5FYA8 562 aa12.67□□□□□ -0.38
CTNND1-217ENST00000527599 PHACTR4Q8IZ21 702 aa12.67□□□□□ -0.38
CTNND1-217ENST00000527599 SPON2Q9BUD6 331 aa12.67□□□□□ -0.38
CTNND1-217ENST00000527599 METTL5Q9NRN9 209 aaKnown RBP12.67□□□□□ -0.38
CTNND1-217ENST00000527599 C19orf73Q9NVV2 129 aa12.67□□□□□ -0.38
CTNND1-217ENST00000527599 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP12.67□□□□□ -0.38
CTNND1-217ENST00000527599 UBOX5O94941 541 aa12.66□□□□□ -0.38
CTNND1-217ENST00000527599 VAMP1P23763 118 aa12.66□□□□□ -0.38
CTNND1-217ENST00000527599 TNNI2P48788 182 aa12.66□□□□□ -0.38
CTNND1-217ENST00000527599 GAB4Q2WGN9 574 aa12.66□□□□□ -0.38
CTNND1-217ENST00000527599 OVOS1Q6IE37 1185 aa12.66□□□□□ -0.38
CTNND1-217ENST00000527599 GK5Q6ZS86 529 aa12.66□□□□□ -0.38
CTNND1-217ENST00000527599 KIAA0825Q8IV33 1275 aa12.66□□□□□ -0.38
CTNND1-217ENST00000527599 SLITRK4Q8IW52 837 aa12.66□□□□□ -0.38
CTNND1-217ENST00000527599 FLAD1Q8NFF5 587 aa12.66□□□□□ -0.38
CTNND1-217ENST00000527599 ASIC4Q96FT7 647 aa12.66□□□□□ -0.38
CTNND1-217ENST00000527599 ANTXR1Q9H6X2 564 aa12.66□□□□□ -0.38
CTNND1-217ENST00000527599 GMIPQ9P107 970 aa12.66□□□□□ -0.38
CTNND1-217ENST00000527599 CTNND2Q9UQB3 1225 aa12.66□□□□□ -0.38
CTNND1-217ENST00000527599 RGS13O14921 159 aa12.65□□□□□ -0.38
CTNND1-217ENST00000527599 USP48Q86UV5 1035 aa12.65□□□□□ -0.38
CTNND1-217ENST00000527599 REXO1Q8N1G1 1221 aaKnown RBP12.65□□□□□ -0.38
CTNND1-217ENST00000527599 GPR62Q9BZJ7 368 aa12.65□□□□□ -0.38
CTNND1-217ENST00000527599 POLR2BP30876 1174 aaKnown RBP12.64□□□□□ -0.39
CTNND1-217ENST00000527599 RACK1P63244 317 aaKnown RBP12.64□□□□□ -0.39
CTNND1-217ENST00000527599 NKD1Q969G9 470 aa12.64□□□□□ -0.39
CTNND1-217ENST00000527599 BIN1O00499 593 aa12.63□□□□□ -0.39
CTNND1-217ENST00000527599 CDCP2Q5VXM1 449 aa12.63□□□□□ -0.39
CTNND1-217ENST00000527599 KRTAP19-1Q8IUB9 90 aa12.63□□□□□ -0.39
CTNND1-217ENST00000527599 RNF34Q969K3 372 aa12.63□□□□□ -0.39
CTNND1-217ENST00000527599 ATG4CQ96DT6 458 aa12.63□□□□□ -0.39
CTNND1-217ENST00000527599 TPP2P29144 1249 aaPredicted RBP12.62□□□□□ -0.39
CTNND1-217ENST00000527599 MCM4P33991 863 aa12.62□□□□□ -0.39
CTNND1-217ENST00000527599 MLECQ14165 292 aa12.62□□□□□ -0.39
CTNND1-217ENST00000527599 RGS22Q8NE09 1264 aa12.62□□□□□ -0.39
CTNND1-217ENST00000527599 CNNM2Q9H8M5 875 aa12.62□□□□□ -0.39
CTNND1-217ENST00000527599 UNCXA6NJT0 531 aa12.61□□□□□ -0.39
CTNND1-217ENST00000527599 GBP1P32455 592 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms