RNA–Protein interactions for RNA: ENST00000527027.1

PTPRU-210, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 3

Gene PTPRU, Length 619 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-210ENST00000527027 CCNA1P78396 465 aa19.65■□□□□ 0.74
PTPRU-210ENST00000527027 TDHQ8IZJ6 230 aa19.65■□□□□ 0.74
PTPRU-210ENST00000527027 EAF2Q96CJ1 260 aaPredicted RBP19.65■□□□□ 0.74
PTPRU-210ENST00000527027 EDC3Q96F86 508 aaKnown RBP19.65■□□□□ 0.74
PTPRU-210ENST00000527027 FEZ1Q99689 392 aa19.65■□□□□ 0.74
PTPRU-210ENST00000527027 APBA2Q99767 749 aa19.65■□□□□ 0.74
PTPRU-210ENST00000527027 EHD4Q9H223 541 aa19.65■□□□□ 0.74
PTPRU-210ENST00000527027 TLR7Q9NYK1 1049 aaKnown RBP19.65■□□□□ 0.74
PTPRU-210ENST00000527027 SERPINB13Q9UIV8 391 aa19.65■□□□□ 0.74
PTPRU-210ENST00000527027 CNMDO75829 334 aa19.64■□□□□ 0.73
PTPRU-210ENST00000527027 GLRX3O76003 335 aaKnown RBP19.64■□□□□ 0.73
PTPRU-210ENST00000527027 USP14P54578 494 aa19.64■□□□□ 0.73
PTPRU-210ENST00000527027 MAP2K5Q13163 448 aa19.64■□□□□ 0.73
PTPRU-210ENST00000527027 ZYXQ15942 572 aaKnown RBP19.64■□□□□ 0.73
PTPRU-210ENST00000527027 CATSPERGQ6ZRH7 1159 aa19.64■□□□□ 0.73
PTPRU-210ENST00000527027 TTC6Q86TZ1 520 aa19.64■□□□□ 0.73
PTPRU-210ENST00000527027 DEFB123Q8N688 67 aa19.64■□□□□ 0.73
PTPRU-210ENST00000527027 MAGEB6Q8N7X4 407 aa19.64■□□□□ 0.73
PTPRU-210ENST00000527027 UBE2OQ9C0C9 1292 aaKnown RBP19.64■□□□□ 0.73
PTPRU-210ENST00000527027 C1orf115Q9H7X2 142 aa19.64■□□□□ 0.73
PTPRU-210ENST00000527027 RAB3GAP1Q15042 981 aa19.63■□□□□ 0.73
PTPRU-210ENST00000527027 CERKLQ49MI3 558 aaPredicted RBP19.63■□□□□ 0.73
PTPRU-210ENST00000527027 TMED8Q6PL24 325 aaPredicted RBP19.63■□□□□ 0.73
PTPRU-210ENST00000527027 KIAA1683Q9H0B3 1180 aa19.63■□□□□ 0.73
PTPRU-210ENST00000527027 DNAH12Q6ZR08 3092 aa19.63■□□□□ 0.73
PTPRU-210ENST00000527027 MAST2Q6P0Q8 1798 aa19.62■□□□□ 0.73
PTPRU-210ENST00000527027 DDX60LQ5H9U9 1706 aaKnown RBP19.62■□□□□ 0.73
PTPRU-210ENST00000527027 MAP3K12Q12852 859 aa19.62■□□□□ 0.73
PTPRU-210ENST00000527027 LRRC26Q2I0M4 334 aa19.62■□□□□ 0.73
PTPRU-210ENST00000527027 ABCB5Q2M3G0 1257 aa19.62■□□□□ 0.73
PTPRU-210ENST00000527027 MFSD14CQ5VZR4 134 aa19.62■□□□□ 0.73
PTPRU-210ENST00000527027 CABP5Q9NP86 173 aa19.62■□□□□ 0.73
PTPRU-210ENST00000527027 NDUFB9Q9Y6M9 179 aa19.62■□□□□ 0.73
PTPRU-210ENST00000527027 SLC15A5A6NIM6 579 aa19.61■□□□□ 0.73
PTPRU-210ENST00000527027 VCAM1P19320 739 aa19.61■□□□□ 0.73
PTPRU-210ENST00000527027 PTPREP23469 700 aa19.61■□□□□ 0.73
PTPRU-210ENST00000527027 WDR78Q5VTH9 848 aa19.61■□□□□ 0.73
PTPRU-210ENST00000527027 LBX2Q6XYB7 198 aa19.61■□□□□ 0.73
PTPRU-210ENST00000527027 Q7L0L9 218 aa19.61■□□□□ 0.73
PTPRU-210ENST00000527027 ACER1Q8TDN7 264 aa19.61■□□□□ 0.73
PTPRU-210ENST00000527027 ANTXR1Q9H6X2 564 aa19.61■□□□□ 0.73
PTPRU-210ENST00000527027 FTSJ3Q8IY81 847 aaKnown RBP19.6■□□□□ 0.73
PTPRU-210ENST00000527027 FLRT1Q9NZU1 646 aa19.6■□□□□ 0.73
PTPRU-210ENST00000527027 BTBD7Q9P203 1132 aa19.6■□□□□ 0.73
PTPRU-210ENST00000527027 IVNS1ABPQ9Y6Y0 642 aa19.6■□□□□ 0.73
PTPRU-210ENST00000527027 FOCADQ5VW36 1801 aa19.6■□□□□ 0.73
PTPRU-210ENST00000527027 CDK5RAP2Q96SN8 1893 aa19.59■□□□□ 0.73
PTPRU-210ENST00000527027 HOXC6P09630 235 aa19.59■□□□□ 0.73
PTPRU-210ENST00000527027 SHMT1P34896 483 aa19.59■□□□□ 0.73
PTPRU-210ENST00000527027 PLCD1P51178 756 aa19.59■□□□□ 0.73
PTPRU-210ENST00000527027 ATP2B2Q01814 1243 aa19.59■□□□□ 0.73
PTPRU-210ENST00000527027 ITPRIPQ8IWB1 547 aa19.59■□□□□ 0.73
PTPRU-210ENST00000527027 MTMR10Q9NXD2 777 aa19.59■□□□□ 0.73
PTPRU-210ENST00000527027 STXBP5LQ9Y2K9 1186 aa19.59■□□□□ 0.73
PTPRU-210ENST00000527027 CUL9Q8IWT3 2517 aa19.58■□□□□ 0.73
PTPRU-210ENST00000527027 MSCO60682 206 aa19.58■□□□□ 0.72
PTPRU-210ENST00000527027 GRB14Q14449 540 aa19.58■□□□□ 0.72
PTPRU-210ENST00000527027 RIOK1Q9BRS2 568 aaKnown RBP19.58■□□□□ 0.72
PTPRU-210ENST00000527027 SENP6Q9GZR1 1112 aaPredicted RBP19.58■□□□□ 0.72
PTPRU-210ENST00000527027 RPAP3Q9H6T3 665 aaPredicted RBP19.58■□□□□ 0.72
PTPRU-210ENST00000527027 DDX20Q9UHI6 824 aaKnown RBP19.58■□□□□ 0.72
PTPRU-210ENST00000527027 LAMA2P24043 3122 aaKnown RBP19.57■□□□□ 0.72
PTPRU-210ENST00000527027 MYO5AQ9Y4I1 1855 aaKnown RBP19.57■□□□□ 0.72
PTPRU-210ENST00000527027 SPDYE16A6NNV3 312 aaPredicted RBP19.57■□□□□ 0.72
PTPRU-210ENST00000527027 POLR3DP05423 398 aaPredicted RBP19.57■□□□□ 0.72
PTPRU-210ENST00000527027 RLBP1P12271 317 aa19.57■□□□□ 0.72
PTPRU-210ENST00000527027 CNGA1P29973 690 aa19.57■□□□□ 0.72
PTPRU-210ENST00000527027 GUCY1A2P33402 732 aa19.57■□□□□ 0.72
PTPRU-210ENST00000527027 MDM2Q00987 491 aaPredicted RBP19.57■□□□□ 0.72
PTPRU-210ENST00000527027 ERC1Q8IUD2 1116 aa19.57■□□□□ 0.72
PTPRU-210ENST00000527027 NPLOC4Q8TAT6 608 aa19.57■□□□□ 0.72
PTPRU-210ENST00000527027 LPAR1Q92633 364 aa19.57■□□□□ 0.72
PTPRU-210ENST00000527027 MAGEB6P1A0A0J9YX57 407 aa19.56■□□□□ 0.72
PTPRU-210ENST00000527027 CYP2C19P33261 490 aa19.56■□□□□ 0.72
PTPRU-210ENST00000527027 GABPAQ06546 454 aa19.56■□□□□ 0.72
PTPRU-210ENST00000527027 SEPT2Q15019 361 aa19.56■□□□□ 0.72
PTPRU-210ENST00000527027 CEP85Q6P2H3 762 aa19.56■□□□□ 0.72
PTPRU-210ENST00000527027 AACSQ86V21 672 aa19.56■□□□□ 0.72
PTPRU-210ENST00000527027 HOXC10Q9NYD6 342 aa19.56■□□□□ 0.72
PTPRU-210ENST00000527027 EXOC6BQ9Y2D4 811 aa19.56■□□□□ 0.72
PTPRU-210ENST00000527027 IGHA2P01877 340 aa19.55■□□□□ 0.72
PTPRU-210ENST00000527027 COG2Q14746 738 aa19.55■□□□□ 0.72
PTPRU-210ENST00000527027 MYH1P12882 1939 aa19.55■□□□□ 0.72
PTPRU-210ENST00000527027 DNM1LO00429 736 aa19.54■□□□□ 0.72
PTPRU-210ENST00000527027 STRNO43815 780 aa19.54■□□□□ 0.72
PTPRU-210ENST00000527027 TTF1Q15361 905 aaPredicted RBP19.54■□□□□ 0.72
PTPRU-210ENST00000527027 SLC9C2Q5TAH2 1124 aa19.54■□□□□ 0.72
PTPRU-210ENST00000527027 DPP9Q86TI2 863 aa19.54■□□□□ 0.72
PTPRU-210ENST00000527027 TRPV1Q8NER1 839 aa19.54■□□□□ 0.72
PTPRU-210ENST00000527027 LBHD1Q9BQE6 289 aaPredicted RBP19.54■□□□□ 0.72
PTPRU-210ENST00000527027 CRNKL1Q9BZJ0 848 aaKnown RBP19.54■□□□□ 0.72
PTPRU-210ENST00000527027 A0A1W2PRG0 241 aa19.53■□□□□ 0.72
PTPRU-210ENST00000527027 MPHOSPH10O00566 681 aaKnown RBP19.53■□□□□ 0.72
PTPRU-210ENST00000527027 ATN1P54259 1190 aaPredicted RBP19.53■□□□□ 0.72
PTPRU-210ENST00000527027 MOV10L1Q9BXT6 1211 aaKnown RBP19.53■□□□□ 0.72
PTPRU-210ENST00000527027 MCM9Q9NXL9 1143 aa19.53■□□□□ 0.72
PTPRU-210ENST00000527027 CYBAP13498 195 aa19.52■□□□□ 0.72
PTPRU-210ENST00000527027 PDE6AP16499 860 aa19.52■□□□□ 0.72
PTPRU-210ENST00000527027 ADORA2AP29274 412 aa19.52■□□□□ 0.72
PTPRU-210ENST00000527027 HSP90AB4PQ58FF6 505 aa19.52■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms