RNA–Protein interactions for RNA: ENST00000526877.1

SSSCA1-203, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 3 BASIC

Gene SSSCA1, Length 713 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-203ENST00000526877 PSMA5P28066 241 aa15.02■□□□□ -0
SSSCA1-203ENST00000526877 TDO2P48775 406 aa15.02■□□□□ -0
SSSCA1-203ENST00000526877 TSGA10IPQ3SY00 556 aa15.02■□□□□ -0
SSSCA1-203ENST00000526877 GIMAP6Q6P9H5 292 aa15.02■□□□□ -0
SSSCA1-203ENST00000526877 KIF2CQ99661 725 aa15.02■□□□□ -0
SSSCA1-203ENST00000526877 ATP8A2Q9NTI2 1148 aa15.02■□□□□ -0
SSSCA1-203ENST00000526877 TNRC18O15417 2968 aaPredicted RBP15.01□□□□□ -0.01
SSSCA1-203ENST00000526877 TRIM75PA6NK02 468 aa15.01□□□□□ -0.01
SSSCA1-203ENST00000526877 CYP2C8P10632 490 aa15.01□□□□□ -0.01
SSSCA1-203ENST00000526877 BCRP11274 1271 aa15.01□□□□□ -0.01
SSSCA1-203ENST00000526877 USP5P45974 858 aa15.01□□□□□ -0.01
SSSCA1-203ENST00000526877 ARHGEF6Q15052 776 aa15.01□□□□□ -0.01
SSSCA1-203ENST00000526877 RASEFQ8IZ41 740 aa15.01□□□□□ -0.01
SSSCA1-203ENST00000526877 SAP30BPQ9UHR5 308 aaKnown RBP15.01□□□□□ -0.01
SSSCA1-203ENST00000526877 SLC45A1Q9Y2W3 748 aa15.01□□□□□ -0.01
SSSCA1-203ENST00000526877 PDE4DIPQ5VU43 2346 aa15.01□□□□□ -0.01
SSSCA1-203ENST00000526877 BAZ2AQ9UIF9 1905 aaKnown RBP15.01□□□□□ -0.01
SSSCA1-203ENST00000526877 LAMA4Q16363 1823 aa15.01□□□□□ -0.01
SSSCA1-203ENST00000526877 CYP21A2P08686 494 aa15□□□□□ -0.01
SSSCA1-203ENST00000526877 SPP2Q13103 211 aa15□□□□□ -0.01
SSSCA1-203ENST00000526877 BECN1Q14457 450 aa15□□□□□ -0.01
SSSCA1-203ENST00000526877 GADL1Q6ZQY3 521 aa15□□□□□ -0.01
SSSCA1-203ENST00000526877 SDR42E1Q8WUS8 393 aa15□□□□□ -0.01
SSSCA1-203ENST00000526877 ARMC5Q96C12 935 aa15□□□□□ -0.01
SSSCA1-203ENST00000526877 TM6SF1Q9BZW5 370 aa15□□□□□ -0.01
SSSCA1-203ENST00000526877 EPB41L4AQ9HCS5 686 aaPredicted RBP15□□□□□ -0.01
SSSCA1-203ENST00000526877 PTCH2Q9Y6C5 1203 aa15□□□□□ -0.01
SSSCA1-203ENST00000526877 USP17L5A8MUK1 530 aa14.99□□□□□ -0.01
SSSCA1-203ENST00000526877 ST18O60284 1047 aa14.99□□□□□ -0.01
SSSCA1-203ENST00000526877 GNRH1P01148 92 aa14.99□□□□□ -0.01
SSSCA1-203ENST00000526877 SHROOM1Q2M3G4 852 aaPredicted RBP14.99□□□□□ -0.01
SSSCA1-203ENST00000526877 SH3D19Q5HYK7 790 aa14.99□□□□□ -0.01
SSSCA1-203ENST00000526877 AMOTL1Q8IY63 956 aa14.99□□□□□ -0.01
SSSCA1-203ENST00000526877 ZNF280CQ8ND82 737 aa14.99□□□□□ -0.01
SSSCA1-203ENST00000526877 TRIM47Q96LD4 638 aa14.99□□□□□ -0.01
SSSCA1-203ENST00000526877 JAKMIP1Q96N16 626 aaKnown RBP14.99□□□□□ -0.01
SSSCA1-203ENST00000526877 PARK7Q99497 189 aaKnown RBP14.99□□□□□ -0.01
SSSCA1-203ENST00000526877 WDR18Q9BV38 432 aa14.99□□□□□ -0.01
SSSCA1-203ENST00000526877 TBC1D2Q9BYX2 928 aa14.99□□□□□ -0.01
SSSCA1-203ENST00000526877 AGTPBP1Q9UPW5 1226 aa14.99□□□□□ -0.01
SSSCA1-203ENST00000526877 LOC285556D6RIA3 1793 aa14.98□□□□□ -0.01
SSSCA1-203ENST00000526877 MGAMO43451 1857 aa14.98□□□□□ -0.01
SSSCA1-203ENST00000526877 NAV1Q8NEY1 1877 aa14.98□□□□□ -0.01
SSSCA1-203ENST00000526877 NEK4P51957 841 aa14.98□□□□□ -0.01
SSSCA1-203ENST00000526877 HAND2P61296 217 aa14.98□□□□□ -0.01
SSSCA1-203ENST00000526877 KIF22Q14807 665 aa14.98□□□□□ -0.01
SSSCA1-203ENST00000526877 TREML2Q5T2D2 321 aa14.98□□□□□ -0.01
SSSCA1-203ENST00000526877 TATDN1Q6P1N9 297 aa14.98□□□□□ -0.01
SSSCA1-203ENST00000526877 PROCA1Q8NCQ7 364 aaPredicted RBP14.98□□□□□ -0.01
SSSCA1-203ENST00000526877 NEK1Q96PY6 1258 aa14.98□□□□□ -0.01
SSSCA1-203ENST00000526877 DCP1AQ9NPI6 582 aaPredicted RBP14.98□□□□□ -0.01
SSSCA1-203ENST00000526877 DAXXQ9UER7 740 aaPredicted RBP14.98□□□□□ -0.01
SSSCA1-203ENST00000526877 CYP46A1Q9Y6A2 500 aa14.98□□□□□ -0.01
SSSCA1-203ENST00000526877 DOCK3Q8IZD9 2030 aa14.97□□□□□ -0.01
SSSCA1-203ENST00000526877 HLA-DOAP06340 250 aa14.97□□□□□ -0.01
SSSCA1-203ENST00000526877 ASNSP08243 561 aa14.97□□□□□ -0.01
SSSCA1-203ENST00000526877 HMGB1P09429 215 aaKnown RBP14.97□□□□□ -0.01
SSSCA1-203ENST00000526877 CASTP20810 708 aaKnown RBP14.97□□□□□ -0.01
SSSCA1-203ENST00000526877 PSMC4P43686 418 aa14.97□□□□□ -0.01
SSSCA1-203ENST00000526877 HMGCS2P54868 508 aa14.97□□□□□ -0.01
SSSCA1-203ENST00000526877 TRDNQ13061 729 aa14.97□□□□□ -0.01
SSSCA1-203ENST00000526877 SLC4A8Q2Y0W8 1093 aa14.97□□□□□ -0.01
SSSCA1-203ENST00000526877 BLOC1S2Q6QNY1 142 aa14.97□□□□□ -0.01
SSSCA1-203ENST00000526877 CRACR2BQ8N4Y2 399 aaPredicted RBP14.97□□□□□ -0.01
SSSCA1-203ENST00000526877 EHD4Q9H223 541 aa14.97□□□□□ -0.01
SSSCA1-203ENST00000526877 ZSWIM6Q9HCJ5 1215 aa14.97□□□□□ -0.01
SSSCA1-203ENST00000526877 GINM1Q9NU53 330 aa14.97□□□□□ -0.01
SSSCA1-203ENST00000526877 ARPP21Q9UBL0 812 aaPredicted RBP14.97□□□□□ -0.01
SSSCA1-203ENST00000526877 DDX60LQ5H9U9 1706 aaKnown RBP14.97□□□□□ -0.01
SSSCA1-203ENST00000526877 CENPFP49454 3210 aa14.96□□□□□ -0.01
SSSCA1-203ENST00000526877 RBBP6Q7Z6E9 1792 aaKnown RBP14.96□□□□□ -0.01
SSSCA1-203ENST00000526877 POTEFA5A3E0 1075 aa14.96□□□□□ -0.01
SSSCA1-203ENST00000526877 MINDY4BA8MYZ0 360 aa14.96□□□□□ -0.01
SSSCA1-203ENST00000526877 E7EWF7 191 aa14.96□□□□□ -0.01
SSSCA1-203ENST00000526877 ECM2O94769 699 aaPredicted RBP14.96□□□□□ -0.01
SSSCA1-203ENST00000526877 GDF11O95390 407 aa14.96□□□□□ -0.01
SSSCA1-203ENST00000526877 SLC3A2P08195 630 aaKnown RBP14.96□□□□□ -0.01
SSSCA1-203ENST00000526877 OSBPP22059 807 aa14.96□□□□□ -0.01
SSSCA1-203ENST00000526877 PLCD1P51178 756 aa14.96□□□□□ -0.01
SSSCA1-203ENST00000526877 PRMT2P55345 433 aa14.96□□□□□ -0.01
SSSCA1-203ENST00000526877 ADCK5Q3MIX3 580 aa14.96□□□□□ -0.01
SSSCA1-203ENST00000526877 SBK1Q52WX2 424 aa14.96□□□□□ -0.01
SSSCA1-203ENST00000526877 RUFY3Q7L099 469 aa14.96□□□□□ -0.01
SSSCA1-203ENST00000526877 HSCBQ8IWL3 235 aa14.96□□□□□ -0.01
SSSCA1-203ENST00000526877 SNX21Q969T3 373 aa14.96□□□□□ -0.01
SSSCA1-203ENST00000526877 ZNF333Q96JL9 665 aa14.96□□□□□ -0.01
SSSCA1-203ENST00000526877 RNF41Q9H4P4 317 aaPredicted RBP14.96□□□□□ -0.01
SSSCA1-203ENST00000526877 MCM9Q9NXL9 1143 aa14.96□□□□□ -0.01
SSSCA1-203ENST00000526877 SRRDQ9UH36 339 aa14.96□□□□□ -0.01
SSSCA1-203ENST00000526877 SERPINB13Q9UIV8 391 aa14.96□□□□□ -0.01
SSSCA1-203ENST00000526877 ANAPC4Q9UJX5 808 aa14.96□□□□□ -0.01
SSSCA1-203ENST00000526877 USP17L12C9JPN9 530 aa14.95□□□□□ -0.02
SSSCA1-203ENST00000526877 USP17L21D6R901 530 aa14.95□□□□□ -0.02
SSSCA1-203ENST00000526877 MCM2P49736 904 aa14.95□□□□□ -0.02
SSSCA1-203ENST00000526877 BACE1P56817 501 aa14.95□□□□□ -0.02
SSSCA1-203ENST00000526877 EVX2Q03828 476 aa14.95□□□□□ -0.02
SSSCA1-203ENST00000526877 PPARAQ07869 468 aa14.95□□□□□ -0.02
SSSCA1-203ENST00000526877 CTR9Q6PD62 1173 aa14.95□□□□□ -0.02
SSSCA1-203ENST00000526877 RALYLQ86SE5 291 aaKnown RBP14.95□□□□□ -0.02
SSSCA1-203ENST00000526877 TTC6Q86TZ1 520 aa14.95□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms