RNA–Protein interactions for RNA: ENST00000526433.1

SSSCA1-202, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 3

Gene SSSCA1, Length 739 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-202ENST00000526433 PPARAQ07869 468 aa19.34■□□□□ 0.69
SSSCA1-202ENST00000526433 USP17L2Q6R6M4 530 aa19.34■□□□□ 0.69
SSSCA1-202ENST00000526433 C17orf99Q6UX52 265 aa19.34■□□□□ 0.69
SSSCA1-202ENST00000526433 PARK7Q99497 189 aaKnown RBP19.34■□□□□ 0.69
SSSCA1-202ENST00000526433 EMILIN3Q9NT22 766 aa19.34■□□□□ 0.69
SSSCA1-202ENST00000526433 FGAP02671 866 aa19.33■□□□□ 0.68
SSSCA1-202ENST00000526433 RASA1P20936 1047 aa19.33■□□□□ 0.68
SSSCA1-202ENST00000526433 CTU1Q7Z7A3 348 aaKnown RBP19.33■□□□□ 0.68
SSSCA1-202ENST00000526433 SKAP1Q86WV1 359 aa19.33■□□□□ 0.68
SSSCA1-202ENST00000526433 ZNF444Q8N0Y2 327 aaPredicted RBP19.33■□□□□ 0.68
SSSCA1-202ENST00000526433 FEZ1Q99689 392 aa19.33■□□□□ 0.68
SSSCA1-202ENST00000526433 CPA4Q9UI42 421 aa19.33■□□□□ 0.68
SSSCA1-202ENST00000526433 ROBO3Q96MS0 1386 aa19.32■□□□□ 0.68
SSSCA1-202ENST00000526433 SLC3A2P08195 630 aaKnown RBP19.32■□□□□ 0.68
SSSCA1-202ENST00000526433 USP14P54578 494 aa19.32■□□□□ 0.68
SSSCA1-202ENST00000526433 PABPC4Q13310 644 aaKnown RBP eCLIP19.32■□□□□ 0.684e-8■■■■□ 20.3
SSSCA1-202ENST00000526433 ZYXQ15942 572 aaKnown RBP19.32■□□□□ 0.68
SSSCA1-202ENST00000526433 SIAH1Q8IUQ4 282 aa19.32■□□□□ 0.68
SSSCA1-202ENST00000526433 ERO1AQ96HE7 468 aa19.32■□□□□ 0.68
SSSCA1-202ENST00000526433 KIAA1683Q9H0B3 1180 aa19.32■□□□□ 0.68
SSSCA1-202ENST00000526433 ZNF287Q9HBT7 754 aa19.32■□□□□ 0.68
SSSCA1-202ENST00000526433 ADGRA2Q96PE1 1338 aa19.31■□□□□ 0.68
SSSCA1-202ENST00000526433 A0A1W2PRG0 241 aa19.31■□□□□ 0.68
SSSCA1-202ENST00000526433 PRDM1O75626 825 aa19.31■□□□□ 0.68
SSSCA1-202ENST00000526433 OSBPP22059 807 aa19.31■□□□□ 0.68
SSSCA1-202ENST00000526433 CTDSPL2Q05D32 466 aa19.31■□□□□ 0.68
SSSCA1-202ENST00000526433 PDE4BQ07343 736 aa19.31■□□□□ 0.68
SSSCA1-202ENST00000526433 CD99L2Q8TCZ2 262 aa19.31■□□□□ 0.68
SSSCA1-202ENST00000526433 MCOLN1Q9GZU1 580 aa19.31■□□□□ 0.68
SSSCA1-202ENST00000526433 PNMA3Q9UL41 463 aa19.31■□□□□ 0.68
SSSCA1-202ENST00000526433 LOC285556D6RIA3 1793 aa19.31■□□□□ 0.68
SSSCA1-202ENST00000526433 CHMLP26374 656 aa19.3■□□□□ 0.68
SSSCA1-202ENST00000526433 HOXA7P31268 230 aaPredicted RBP19.3■□□□□ 0.68
SSSCA1-202ENST00000526433 CLEC10AQ8IUN9 316 aa19.3■□□□□ 0.68
SSSCA1-202ENST00000526433 C12orf42Q96LP6 360 aa19.3■□□□□ 0.68
SSSCA1-202ENST00000526433 GNL3Q9BVP2 549 aaKnown RBP eCLIP19.3■□□□□ 0.68
SSSCA1-202ENST00000526433 ASCC2Q9H1I8 757 aaPredicted RBP19.3■□□□□ 0.68
SSSCA1-202ENST00000526433 KANSL2Q9H9L4 492 aa19.3■□□□□ 0.68
SSSCA1-202ENST00000526433 INCENPQ9NQS7 918 aa19.3■□□□□ 0.68
SSSCA1-202ENST00000526433 ANAPC4Q9UJX5 808 aa19.3■□□□□ 0.68
SSSCA1-202ENST00000526433 BCRP11274 1271 aa19.29■□□□□ 0.68
SSSCA1-202ENST00000526433 CAP1Q01518 475 aa19.29■□□□□ 0.68
SSSCA1-202ENST00000526433 ICA1Q05084 483 aa19.29■□□□□ 0.68
SSSCA1-202ENST00000526433 ERICH6BQ5W0A0 696 aa19.29■□□□□ 0.68
SSSCA1-202ENST00000526433 SMCR8Q8TEV9 937 aaPredicted RBP19.29■□□□□ 0.68
SSSCA1-202ENST00000526433 P2RX7Q99572 595 aaKnown RBP19.29■□□□□ 0.68
SSSCA1-202ENST00000526433 ARHGEF10LQ9HCE6 1279 aa19.29■□□□□ 0.68
SSSCA1-202ENST00000526433 EEF2P13639 858 aaKnown RBP19.28■□□□□ 0.68
SSSCA1-202ENST00000526433 ATP2B2Q01814 1243 aa19.28■□□□□ 0.68
SSSCA1-202ENST00000526433 TMX2Q9Y320 296 aa19.28■□□□□ 0.68
SSSCA1-202ENST00000526433 TRIM17Q9Y577 477 aa19.28■□□□□ 0.68
SSSCA1-202ENST00000526433 USP17L15C9J2P7 530 aa19.27■□□□□ 0.68
SSSCA1-202ENST00000526433 USP17L13C9JLJ4 530 aa19.27■□□□□ 0.68
SSSCA1-202ENST00000526433 USP17L11C9JVI0 530 aa19.27■□□□□ 0.68
SSSCA1-202ENST00000526433 USP17L18D6R9N7 530 aa19.27■□□□□ 0.68
SSSCA1-202ENST00000526433 USP17L22D6RA61 530 aa19.27■□□□□ 0.68
SSSCA1-202ENST00000526433 USP17L17D6RBQ6 530 aa19.27■□□□□ 0.68
SSSCA1-202ENST00000526433 USP17L19D6RCP7 530 aa19.27■□□□□ 0.68
SSSCA1-202ENST00000526433 USP17L20D6RJB6 530 aa19.27■□□□□ 0.68
SSSCA1-202ENST00000526433 IRX3P78415 501 aaPredicted RBP19.27■□□□□ 0.68
SSSCA1-202ENST00000526433 LACTBP83111 547 aaPredicted RBP19.27■□□□□ 0.68
SSSCA1-202ENST00000526433 TFAP4Q01664 338 aa19.27■□□□□ 0.68
SSSCA1-202ENST00000526433 USP17L24Q0WX57 530 aa19.27■□□□□ 0.68
SSSCA1-202ENST00000526433 KIF22Q14807 665 aa19.27■□□□□ 0.68
SSSCA1-202ENST00000526433 ARHGEF6Q15052 776 aa19.27■□□□□ 0.68
SSSCA1-202ENST00000526433 PKN2Q16513 984 aaKnown RBP19.27■□□□□ 0.68
SSSCA1-202ENST00000526433 FAM47AQ5JRC9 791 aa19.27■□□□□ 0.68
SSSCA1-202ENST00000526433 OTOP1Q7RTM1 612 aa19.27■□□□□ 0.68
SSSCA1-202ENST00000526433 RUFY2Q8WXA3 655 aa19.27■□□□□ 0.68
SSSCA1-202ENST00000526433 IL25Q9H293 177 aa19.27■□□□□ 0.68
SSSCA1-202ENST00000526433 EFCC1Q9HA90 598 aa19.27■□□□□ 0.68
SSSCA1-202ENST00000526433 PPP4R2Q9NY27 417 aa19.27■□□□□ 0.68
SSSCA1-202ENST00000526433 DDX52Q9Y2R4 599 aaKnown RBP eCLIP19.27■□□□□ 0.68
SSSCA1-202ENST00000526433 TACC3Q9Y6A5 838 aa19.27■□□□□ 0.68
SSSCA1-202ENST00000526433 ZMYM6O95789 1325 aa19.26■□□□□ 0.67
SSSCA1-202ENST00000526433 GCLCP48506 637 aaPredicted RBP19.26■□□□□ 0.67
SSSCA1-202ENST00000526433 HAND2P61296 217 aa19.26■□□□□ 0.67
SSSCA1-202ENST00000526433 KIAA1755Q5JYT7 1200 aa19.26■□□□□ 0.67
SSSCA1-202ENST00000526433 CATSPERGQ6ZRH7 1159 aa19.26■□□□□ 0.67
SSSCA1-202ENST00000526433 NEDD1Q8NHV4 660 aa19.26■□□□□ 0.67
SSSCA1-202ENST00000526433 DSCC1Q9BVC3 393 aa19.26■□□□□ 0.67
SSSCA1-202ENST00000526433 ARHGAP39Q9C0H5 1083 aa19.26■□□□□ 0.67
SSSCA1-202ENST00000526433 SH2D4AQ9H788 454 aa19.26■□□□□ 0.67
SSSCA1-202ENST00000526433 IGKV6D-41A0A0C4DH26 115 aa19.25■□□□□ 0.67
SSSCA1-202ENST00000526433 ECM2O94769 699 aaPredicted RBP19.25■□□□□ 0.67
SSSCA1-202ENST00000526433 FGRP09769 529 aa19.25■□□□□ 0.67
SSSCA1-202ENST00000526433 TSPY3P0CV98 308 aa19.25■□□□□ 0.67
SSSCA1-202ENST00000526433 TSPY8P0CW00 308 aa19.25■□□□□ 0.67
SSSCA1-202ENST00000526433 VCAM1P19320 739 aa19.25■□□□□ 0.67
SSSCA1-202ENST00000526433 ANKRD13CQ8N6S4 541 aa19.25■□□□□ 0.67
SSSCA1-202ENST00000526433 ABHD8Q96I13 439 aa19.25■□□□□ 0.67
SSSCA1-202ENST00000526433 NYAP2Q9P242 653 aa19.25■□□□□ 0.67
SSSCA1-202ENST00000526433 GREB1LQ9C091 1923 aaPredicted RBP19.25■□□□□ 0.67
SSSCA1-202ENST00000526433 ORC4O43929 436 aa19.24■□□□□ 0.67
SSSCA1-202ENST00000526433 CTGFP29279 349 aa19.24■□□□□ 0.67
SSSCA1-202ENST00000526433 PSMC4P43686 418 aa19.24■□□□□ 0.67
SSSCA1-202ENST00000526433 HERVK_113P62684 666 aa19.24■□□□□ 0.67
SSSCA1-202ENST00000526433 RPAP3Q9H6T3 665 aaPredicted RBP19.24■□□□□ 0.67
SSSCA1-202ENST00000526433 VCPKMTQ9H867 229 aa19.24■□□□□ 0.67
SSSCA1-202ENST00000526433 MTMR4Q9NYA4 1195 aa19.24■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms