RNA–Protein interactions for RNA: ENST00000525970.5

CSDE1-211, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 503 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-211ENST00000525970 DNAJC2Q99543 621 aaKnown RBP6.89□□□□□ -1.31
CSDE1-211ENST00000525970 NOC4LQ9BVI4 516 aaKnown RBP6.89□□□□□ -1.31
CSDE1-211ENST00000525970 PRDM7Q9NQW5 492 aa6.89□□□□□ -1.31
CSDE1-211ENST00000525970 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP6.89□□□□□ -1.317e-7■□□□□ 9.9
CSDE1-211ENST00000525970 PCDHA4Q9UN74 947 aa6.89□□□□□ -1.31
CSDE1-211ENST00000525970 CSADQ9Y600 493 aa6.89□□□□□ -1.31
CSDE1-211ENST00000525970 ZNF503-AS2A6NEH8 195 aa6.88□□□□□ -1.31
CSDE1-211ENST00000525970 LIG3P49916 1009 aa6.88□□□□□ -1.31
CSDE1-211ENST00000525970 UBE3DQ7Z6J8 389 aa6.88□□□□□ -1.31
CSDE1-211ENST00000525970 NOP9Q86U38 636 aaKnown RBP6.88□□□□□ -1.31
CSDE1-211ENST00000525970 INPP5FQ9Y2H2 1132 aa6.88□□□□□ -1.31
CSDE1-211ENST00000525970 F6X3S4 739 aa6.87□□□□□ -1.31
CSDE1-211ENST00000525970 FGRP09769 529 aa6.87□□□□□ -1.31
CSDE1-211ENST00000525970 DNAJA1P31689 397 aaKnown RBP6.87□□□□□ -1.31
CSDE1-211ENST00000525970 RPS26P62854 115 aaKnown RBP6.87□□□□□ -1.31
CSDE1-211ENST00000525970 ARID5AQ03989 594 aa6.87□□□□□ -1.31
CSDE1-211ENST00000525970 MCF2L2Q86YR7 1114 aa6.87□□□□□ -1.31
CSDE1-211ENST00000525970 RELL1Q8IUW5 271 aa6.87□□□□□ -1.31
CSDE1-211ENST00000525970 ELMO3Q96BJ8 720 aa6.87□□□□□ -1.31
CSDE1-211ENST00000525970 PPP1R16BQ96T49 567 aa6.87□□□□□ -1.31
CSDE1-211ENST00000525970 GGT7Q9UJ14 662 aa6.87□□□□□ -1.31
CSDE1-211ENST00000525970 TLR6Q9Y2C9 796 aa6.87□□□□□ -1.31
CSDE1-211ENST00000525970 PCDHB5Q9Y5E4 795 aa6.87□□□□□ -1.31
CSDE1-211ENST00000525970 GLI1P08151 1106 aa6.86□□□□□ -1.31
CSDE1-211ENST00000525970 ZNF865P0CJ78 1059 aaPredicted RBP6.86□□□□□ -1.31
CSDE1-211ENST00000525970 CAP2P40123 477 aa6.86□□□□□ -1.31
CSDE1-211ENST00000525970 PTPN11Q06124 597 aaPredicted RBP6.86□□□□□ -1.31
CSDE1-211ENST00000525970 MLANAQ16655 118 aa6.86□□□□□ -1.31
CSDE1-211ENST00000525970 AGMOQ6ZNB7 445 aa6.86□□□□□ -1.31
CSDE1-211ENST00000525970 CCDC120Q96HB5 630 aa6.86□□□□□ -1.31
CSDE1-211ENST00000525970 KRTAP4-9Q9BYQ8 210 aa6.86□□□□□ -1.31
CSDE1-211ENST00000525970 MIR1-1HGQ9H1L0 117 aa6.86□□□□□ -1.31
CSDE1-211ENST00000525970 FAM155AB1AL88 458 aaPredicted RBP6.85□□□□□ -1.31
CSDE1-211ENST00000525970 TSPAN15O95858 294 aa6.85□□□□□ -1.31
CSDE1-211ENST00000525970 GBP2P32456 591 aaPredicted RBP6.85□□□□□ -1.31
CSDE1-211ENST00000525970 GTF2F1P35269 517 aaKnown RBP eCLIP6.85□□□□□ -1.311e-7■■■■■ 29.4
CSDE1-211ENST00000525970 SEPT6Q14141 434 aa6.85□□□□□ -1.31
CSDE1-211ENST00000525970 CYFIP1Q7L576 1253 aa6.85□□□□□ -1.31
CSDE1-211ENST00000525970 JARID2Q92833 1246 aaPredicted RBP6.85□□□□□ -1.31
CSDE1-211ENST00000525970 SEMA3GQ9NS98 782 aa6.85□□□□□ -1.31
CSDE1-211ENST00000525970 MINDY4BA8MYZ0 360 aa6.84□□□□□ -1.31
CSDE1-211ENST00000525970 IQCJ-SCHIP1C9J366 451 aaPredicted RBP6.84□□□□□ -1.31
CSDE1-211ENST00000525970 SLITRK5O94991 958 aa6.84□□□□□ -1.31
CSDE1-211ENST00000525970 ATF4P18848 351 aaPredicted RBP6.84□□□□□ -1.31
CSDE1-211ENST00000525970 TFE3P19532 575 aaPredicted RBP6.84□□□□□ -1.31
CSDE1-211ENST00000525970 RAP1GAPP47736 663 aa6.84□□□□□ -1.31
CSDE1-211ENST00000525970 CCDC144BQ3MJ40 725 aa6.84□□□□□ -1.31
CSDE1-211ENST00000525970 SFRP5Q5T4F7 317 aa6.84□□□□□ -1.31
CSDE1-211ENST00000525970 DIEXFQ68CQ4 756 aaKnown RBP6.84□□□□□ -1.31
CSDE1-211ENST00000525970 ZNF746Q6NUN9 644 aaPredicted RBP6.84□□□□□ -1.31
CSDE1-211ENST00000525970 HDXQ7Z353 690 aa6.84□□□□□ -1.31
CSDE1-211ENST00000525970 CILP2Q8IUL8 1156 aa6.84□□□□□ -1.31
CSDE1-211ENST00000525970 MFSD4AQ8N468 514 aa6.84□□□□□ -1.31
CSDE1-211ENST00000525970 MFSD2AQ8NA29 543 aa6.84□□□□□ -1.31
CSDE1-211ENST00000525970 RASGRP4Q8TDF6 673 aa6.84□□□□□ -1.31
CSDE1-211ENST00000525970 KIRREL1Q96J84 757 aa6.84□□□□□ -1.31
CSDE1-211ENST00000525970 TOX2Q96NM4 488 aa6.84□□□□□ -1.31
CSDE1-211ENST00000525970 CARS2Q9HA77 564 aaKnown RBP6.84□□□□□ -1.31
CSDE1-211ENST00000525970 COPRSQ9NQ92 184 aa6.84□□□□□ -1.31
CSDE1-211ENST00000525970 GDNFP39905 211 aa6.83□□□□□ -1.32
CSDE1-211ENST00000525970 PAK2Q13177 524 aa6.83□□□□□ -1.32
CSDE1-211ENST00000525970 PWP1Q13610 501 aa6.83□□□□□ -1.32
CSDE1-211ENST00000525970 SLBPQ14493 270 aaKnown RBP eCLIP6.83□□□□□ -1.32
CSDE1-211ENST00000525970 INPP5AQ14642 412 aa6.83□□□□□ -1.32
CSDE1-211ENST00000525970 LCE4AQ5TA78 99 aa6.83□□□□□ -1.32
CSDE1-211ENST00000525970 FYB2Q5VWT5 728 aa6.83□□□□□ -1.32
CSDE1-211ENST00000525970 LRFN4Q6PJG9 635 aa6.83□□□□□ -1.32
CSDE1-211ENST00000525970 PDZRN4Q6ZMN7 1036 aaPredicted RBP6.83□□□□□ -1.32
CSDE1-211ENST00000525970 THAP5Q7Z6K1 395 aa6.83□□□□□ -1.32
CSDE1-211ENST00000525970 PHC3Q8NDX5 983 aa6.83□□□□□ -1.32
CSDE1-211ENST00000525970 GAL3ST3Q96A11 431 aa6.83□□□□□ -1.32
CSDE1-211ENST00000525970 LIN37Q96GY3 246 aaPredicted RBP6.83□□□□□ -1.32
CSDE1-211ENST00000525970 COX4I2Q96KJ9 171 aa6.83□□□□□ -1.32
CSDE1-211ENST00000525970 HSPA12BQ96MM6 686 aa6.83□□□□□ -1.32
CSDE1-211ENST00000525970 TMEM74Q96NL1 305 aa6.83□□□□□ -1.32
CSDE1-211ENST00000525970 RSRP1Q9BUV0 290 aa6.83□□□□□ -1.32
CSDE1-211ENST00000525970 WNT10AQ9GZT5 417 aa6.83□□□□□ -1.32
CSDE1-211ENST00000525970 TPX2Q9ULW0 747 aaKnown RBP6.83□□□□□ -1.32
CSDE1-211ENST00000525970 SNCAIPQ9Y6H5 919 aa6.83□□□□□ -1.32
CSDE1-211ENST00000525970 PRAMEF27A3QJZ7 478 aa6.82□□□□□ -1.32
CSDE1-211ENST00000525970 PF4P02776 101 aa6.82□□□□□ -1.32
CSDE1-211ENST00000525970 TMEM67Q5HYA8 995 aa6.82□□□□□ -1.32
CSDE1-211ENST00000525970 SOGA3Q5TF21 947 aa6.82□□□□□ -1.32
CSDE1-211ENST00000525970 VPS37DQ86XT2 251 aa6.82□□□□□ -1.32
CSDE1-211ENST00000525970 GPRASP2Q96D09 838 aa6.82□□□□□ -1.32
CSDE1-211ENST00000525970 PLPPR2Q96GM1 343 aa6.82□□□□□ -1.32
CSDE1-211ENST00000525970 MIPEPQ99797 713 aa6.82□□□□□ -1.32
CSDE1-211ENST00000525970 HIRIP3Q9BW71 556 aaPredicted RBP6.82□□□□□ -1.32
CSDE1-211ENST00000525970 PIF1Q9H611 641 aa6.82□□□□□ -1.32
CSDE1-211ENST00000525970 ATP13A1Q9HD20 1204 aa6.82□□□□□ -1.32
CSDE1-211ENST00000525970 CAPN6Q9Y6Q1 641 aa6.82□□□□□ -1.32
CSDE1-211ENST00000525970 TLDC2A0PJX2 215 aa6.81□□□□□ -1.32
CSDE1-211ENST00000525970 CDK8P49336 464 aa6.81□□□□□ -1.32
CSDE1-211ENST00000525970 FAM160A1Q05DH4 1040 aa6.81□□□□□ -1.32
CSDE1-211ENST00000525970 CAMK2GQ13555 558 aaPredicted RBP6.81□□□□□ -1.32
CSDE1-211ENST00000525970 WIPI1Q5MNZ9 446 aaPredicted RBP6.81□□□□□ -1.32
CSDE1-211ENST00000525970 MPZL3Q6UWV2 235 aa6.81□□□□□ -1.32
CSDE1-211ENST00000525970 HID1Q8IV36 788 aa6.81□□□□□ -1.32
CSDE1-211ENST00000525970 FBRSQ9HAH7 460 aa6.81□□□□□ -1.32
CSDE1-211ENST00000525970 KBTBD4Q9NVX7 518 aa6.81□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms