RNA–Protein interactions for RNA: ENST00000525936.1

EXOSC4-202, Transcript of exosome component 4, humanhuman

TSL 3 BASIC

Gene EXOSC4, Length 606 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC4-202ENST00000525936 SKAP1Q86WV1 359 aa23.58■■□□□ 1.37
EXOSC4-202ENST00000525936 ACER1Q8TDN7 264 aa23.58■■□□□ 1.37
EXOSC4-202ENST00000525936 GNL3Q9BVP2 549 aaKnown RBP eCLIP23.58■■□□□ 1.37
EXOSC4-202ENST00000525936 KIAA1683Q9H0B3 1180 aa23.58■■□□□ 1.37
EXOSC4-202ENST00000525936 EMILIN3Q9NT22 766 aa23.58■■□□□ 1.37
EXOSC4-202ENST00000525936 FKTNO75072 461 aa23.57■■□□□ 1.36
EXOSC4-202ENST00000525936 C17orf99Q6UX52 265 aa23.57■■□□□ 1.36
EXOSC4-202ENST00000525936 C12orf42Q96LP6 360 aa23.57■■□□□ 1.36
EXOSC4-202ENST00000525936 MYH8P13535 1937 aa23.57■■□□□ 1.36
EXOSC4-202ENST00000525936 A0A1W2PRG0 241 aa23.56■■□□□ 1.36
EXOSC4-202ENST00000525936 MPHOSPH10O00566 681 aaKnown RBP23.56■■□□□ 1.36
EXOSC4-202ENST00000525936 CHMLP26374 656 aa23.56■■□□□ 1.36
EXOSC4-202ENST00000525936 IL25Q9H293 177 aa23.56■■□□□ 1.36
EXOSC4-202ENST00000525936 FGRP09769 529 aa23.55■■□□□ 1.36
EXOSC4-202ENST00000525936 CYP2C8P10632 490 aa23.55■■□□□ 1.36
EXOSC4-202ENST00000525936 HOXA7P31268 230 aaPredicted RBP23.55■■□□□ 1.36
EXOSC4-202ENST00000525936 USP17L2Q6R6M4 530 aa23.55■■□□□ 1.36
EXOSC4-202ENST00000525936 PARK7Q99497 189 aaKnown RBP23.55■■□□□ 1.36
EXOSC4-202ENST00000525936 MKNK2Q9HBH9 465 aa23.55■■□□□ 1.36
EXOSC4-202ENST00000525936 ZNF287Q9HBT7 754 aa23.55■■□□□ 1.36
EXOSC4-202ENST00000525936 PPP4R2Q9NY27 417 aa23.55■■□□□ 1.36
EXOSC4-202ENST00000525936 SP3Q02447 781 aa23.54■■□□□ 1.36
EXOSC4-202ENST00000525936 KANSL2Q9H9L4 492 aa23.54■■□□□ 1.36
EXOSC4-202ENST00000525936 TMOD4Q9NZQ9 345 aa23.54■■□□□ 1.36
EXOSC4-202ENST00000525936 DDX52Q9Y2R4 599 aaKnown RBP eCLIP23.54■■□□□ 1.36
EXOSC4-202ENST00000525936 TACC3Q9Y6A5 838 aa23.54■■□□□ 1.36
EXOSC4-202ENST00000525936 GREB1LQ9C091 1923 aaPredicted RBP23.54■■□□□ 1.36
EXOSC4-202ENST00000525936 IGKV6D-41A0A0C4DH26 115 aa23.53■■□□□ 1.36
EXOSC4-202ENST00000525936 SLC3A2P08195 630 aaKnown RBP23.53■■□□□ 1.36
EXOSC4-202ENST00000525936 USP14P54578 494 aa23.53■■□□□ 1.36
EXOSC4-202ENST00000525936 PDE4BQ07343 736 aa23.53■■□□□ 1.36
EXOSC4-202ENST00000525936 BMP2KLQ5H9B9 411 aa23.53■■□□□ 1.36
EXOSC4-202ENST00000525936 STK11IPQ8N1F8 1099 aa23.53■■□□□ 1.36
EXOSC4-202ENST00000525936 DSCC1Q9BVC3 393 aa23.53■■□□□ 1.36
EXOSC4-202ENST00000525936 PRDM1O75626 825 aa23.52■■□□□ 1.36
EXOSC4-202ENST00000525936 BCRP11274 1271 aa23.52■■□□□ 1.36
EXOSC4-202ENST00000525936 CAP1Q01518 475 aa23.52■■□□□ 1.36
EXOSC4-202ENST00000525936 PABPC4Q13310 644 aaKnown RBP eCLIP23.52■■□□□ 1.365e-7■■■■■ 30.2
EXOSC4-202ENST00000525936 TMX2Q9Y320 296 aa23.52■■□□□ 1.36
EXOSC4-202ENST00000525936 RAD50Q92878 1312 aa23.52■■□□□ 1.36
EXOSC4-202ENST00000525936 ICA1Q05084 483 aa23.51■■□□□ 1.35
EXOSC4-202ENST00000525936 CTDSPL2Q05D32 466 aa23.51■■□□□ 1.35
EXOSC4-202ENST00000525936 CTU1Q7Z7A3 348 aaKnown RBP23.51■■□□□ 1.35
EXOSC4-202ENST00000525936 CLEC10AQ8IUN9 316 aa23.51■■□□□ 1.35
EXOSC4-202ENST00000525936 ZNF444Q8N0Y2 327 aaPredicted RBP23.51■■□□□ 1.35
EXOSC4-202ENST00000525936 ASCC2Q9H1I8 757 aaPredicted RBP23.51■■□□□ 1.35
EXOSC4-202ENST00000525936 INCENPQ9NQS7 918 aa23.51■■□□□ 1.35
EXOSC4-202ENST00000525936 PNMA3Q9UL41 463 aa23.51■■□□□ 1.35
EXOSC4-202ENST00000525936 EEF2P13639 858 aaKnown RBP23.5■■□□□ 1.35
EXOSC4-202ENST00000525936 NEDD1Q8NHV4 660 aa23.5■■□□□ 1.35
EXOSC4-202ENST00000525936 RUFY2Q8WXA3 655 aa23.5■■□□□ 1.35
EXOSC4-202ENST00000525936 ERO1AQ96HE7 468 aa23.5■■□□□ 1.35
EXOSC4-202ENST00000525936 FEZ1Q99689 392 aa23.5■■□□□ 1.35
EXOSC4-202ENST00000525936 NBPF3Q9H094 633 aa23.5■■□□□ 1.35
EXOSC4-202ENST00000525936 CPA4Q9UI42 421 aa23.5■■□□□ 1.35
EXOSC4-202ENST00000525936 PLIN4Q96Q06 1357 aa23.5■■□□□ 1.35
EXOSC4-202ENST00000525936 SGSM2O43147 1006 aa23.49■■□□□ 1.35
EXOSC4-202ENST00000525936 ORC4O43929 436 aa23.49■■□□□ 1.35
EXOSC4-202ENST00000525936 KIAA1755Q5JYT7 1200 aa23.49■■□□□ 1.35
EXOSC4-202ENST00000525936 ARHGEF10LQ9HCE6 1279 aa23.49■■□□□ 1.35
EXOSC4-202ENST00000525936 NYAP2Q9P242 653 aa23.49■■□□□ 1.35
EXOSC4-202ENST00000525936 VCAM1P19320 739 aa23.48■■□□□ 1.35
EXOSC4-202ENST00000525936 OSBPP22059 807 aa23.48■■□□□ 1.35
EXOSC4-202ENST00000525936 ZYXQ15942 572 aaKnown RBP23.48■■□□□ 1.35
EXOSC4-202ENST00000525936 TNS4Q8IZW8 715 aa23.48■■□□□ 1.35
EXOSC4-202ENST00000525936 CD99L2Q8TCZ2 262 aa23.48■■□□□ 1.35
EXOSC4-202ENST00000525936 MKL1Q969V6 931 aa23.48■■□□□ 1.35
EXOSC4-202ENST00000525936 P2RX7Q99572 595 aaKnown RBP23.48■■□□□ 1.35
EXOSC4-202ENST00000525936 HTTP42858 3142 aa23.47■■□□□ 1.35
EXOSC4-202ENST00000525936 LACTBP83111 547 aaPredicted RBP23.47■■□□□ 1.35
EXOSC4-202ENST00000525936 TFAP4Q01664 338 aa23.47■■□□□ 1.35
EXOSC4-202ENST00000525936 CATSPERGQ6ZRH7 1159 aa23.47■■□□□ 1.35
EXOSC4-202ENST00000525936 MCOLN1Q9GZU1 580 aa23.47■■□□□ 1.35
EXOSC4-202ENST00000525936 SH2D4AQ9H788 454 aa23.47■■□□□ 1.35
EXOSC4-202ENST00000525936 VCPKMTQ9H867 229 aa23.47■■□□□ 1.35
EXOSC4-202ENST00000525936 MTMR4Q9NYA4 1195 aa23.47■■□□□ 1.35
EXOSC4-202ENST00000525936 USP17L15C9J2P7 530 aa23.46■■□□□ 1.35
EXOSC4-202ENST00000525936 USP17L13C9JLJ4 530 aa23.46■■□□□ 1.35
EXOSC4-202ENST00000525936 USP17L11C9JVI0 530 aa23.46■■□□□ 1.35
EXOSC4-202ENST00000525936 USP17L18D6R9N7 530 aa23.46■■□□□ 1.35
EXOSC4-202ENST00000525936 USP17L22D6RA61 530 aa23.46■■□□□ 1.35
EXOSC4-202ENST00000525936 USP17L17D6RBQ6 530 aa23.46■■□□□ 1.35
EXOSC4-202ENST00000525936 USP17L19D6RCP7 530 aa23.46■■□□□ 1.35
EXOSC4-202ENST00000525936 USP17L20D6RJB6 530 aa23.46■■□□□ 1.35
EXOSC4-202ENST00000525936 GCLCP48506 637 aaPredicted RBP23.46■■□□□ 1.35
EXOSC4-202ENST00000525936 USP17L24Q0WX57 530 aa23.46■■□□□ 1.35
EXOSC4-202ENST00000525936 PKN2Q16513 984 aaKnown RBP23.46■■□□□ 1.35
EXOSC4-202ENST00000525936 FAM47AQ5JRC9 791 aa23.46■■□□□ 1.35
EXOSC4-202ENST00000525936 POTEEQ6S8J3 1075 aa23.46■■□□□ 1.35
EXOSC4-202ENST00000525936 OTOP1Q7RTM1 612 aa23.46■■□□□ 1.35
EXOSC4-202ENST00000525936 SMCR8Q8TEV9 937 aaPredicted RBP23.46■■□□□ 1.35
EXOSC4-202ENST00000525936 LPAR1Q92633 364 aa23.46■■□□□ 1.35
EXOSC4-202ENST00000525936 CEP95Q96GE4 821 aa23.46■■□□□ 1.35
EXOSC4-202ENST00000525936 TSPY3P0CV98 308 aa23.45■■□□□ 1.34
EXOSC4-202ENST00000525936 TSPY8P0CW00 308 aa23.45■■□□□ 1.34
EXOSC4-202ENST00000525936 PCP11498 1178 aaKnown RBP23.45■■□□□ 1.34
EXOSC4-202ENST00000525936 CTGFP29279 349 aa23.45■■□□□ 1.34
EXOSC4-202ENST00000525936 NOVP48745 357 aa23.45■■□□□ 1.34
EXOSC4-202ENST00000525936 HAND2P61296 217 aa23.45■■□□□ 1.34
EXOSC4-202ENST00000525936 AKNAD1Q5T1N1 836 aa23.45■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms