RNA–Protein interactions for RNA: ENST00000525367.1

USP47-206, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 2

Gene USP47, Length 434 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-206ENST00000525367 C19orf47Q8N9M1 422 aaKnown RBP6.97□□□□□ -1.29
USP47-206ENST00000525367 BAHD1Q8TBE0 780 aaPredicted RBP6.97□□□□□ -1.29
USP47-206ENST00000525367 ZNF507Q8TCN5 953 aa6.97□□□□□ -1.29
USP47-206ENST00000525367 MEGF10Q96KG7 1140 aa6.97□□□□□ -1.29
USP47-206ENST00000525367 KANSL2Q9H9L4 492 aa6.97□□□□□ -1.29
USP47-206ENST00000525367 MSRB2Q9Y3D2 182 aa6.97□□□□□ -1.29
USP47-206ENST00000525367 TBX22Q9Y458 520 aa6.97□□□□□ -1.29
USP47-206ENST00000525367 DAGLAQ9Y4D2 1042 aa6.97□□□□□ -1.29
USP47-206ENST00000525367 DDAH1O94760 285 aa6.96□□□□□ -1.3
USP47-206ENST00000525367 UBOX5O94941 541 aa6.96□□□□□ -1.3
USP47-206ENST00000525367 MLECQ14165 292 aa6.96□□□□□ -1.3
USP47-206ENST00000525367 TDRD10Q5VZ19 366 aaKnown RBP6.96□□□□□ -1.3
USP47-206ENST00000525367 PPFIBP1Q86W92 1011 aa6.96□□□□□ -1.3
USP47-206ENST00000525367 TMEM192Q8IY95 271 aa6.96□□□□□ -1.3
USP47-206ENST00000525367 TAB3Q8N5C8 712 aaPredicted RBP6.96□□□□□ -1.3
USP47-206ENST00000525367 FBLIM1Q8WUP2 373 aa6.96□□□□□ -1.3
USP47-206ENST00000525367 MRFAP1L1Q96HT8 127 aa6.96□□□□□ -1.3
USP47-206ENST00000525367 ACSS3Q9H6R3 686 aa6.96□□□□□ -1.3
USP47-206ENST00000525367 SSU72Q9NP77 194 aaKnown RBP6.96□□□□□ -1.3
USP47-206ENST00000525367 MRPL42Q9Y6G3 142 aaKnown RBP6.96□□□□□ -1.3
USP47-206ENST00000525367 SART1O43290 800 aaKnown RBP6.95□□□□□ -1.3
USP47-206ENST00000525367 GAS2O43903 313 aaKnown RBP6.95□□□□□ -1.3
USP47-206ENST00000525367 ADGRE1Q14246 886 aa6.95□□□□□ -1.3
USP47-206ENST00000525367 SLC6A19Q695T7 634 aa6.95□□□□□ -1.3
USP47-206ENST00000525367 CDC37L1Q7L3B6 337 aa6.95□□□□□ -1.3
USP47-206ENST00000525367 ARMCX6Q7L4S7 300 aa6.95□□□□□ -1.3
USP47-206ENST00000525367 PHF6Q8IWS0 365 aaKnown RBP eCLIP6.95□□□□□ -1.3
USP47-206ENST00000525367 FAM178BQ8IXR5 827 aa6.95□□□□□ -1.3
USP47-206ENST00000525367 SLFN12Q8IYM2 578 aa6.95□□□□□ -1.3
USP47-206ENST00000525367 ARMC10Q8N2F6 343 aa6.95□□□□□ -1.3
USP47-206ENST00000525367 KLHL6Q8WZ60 621 aa6.95□□□□□ -1.3
USP47-206ENST00000525367 MKL1Q969V6 931 aa6.95□□□□□ -1.3
USP47-206ENST00000525367 FAM46AQ96IP4 442 aaKnown RBP6.95□□□□□ -1.3
USP47-206ENST00000525367 ZNF512BQ96KM6 892 aaPredicted RBP6.95□□□□□ -1.3
USP47-206ENST00000525367 SEMA6CQ9H3T2 930 aa6.95□□□□□ -1.3
USP47-206ENST00000525367 TLDC2A0PJX2 215 aa6.94□□□□□ -1.3
USP47-206ENST00000525367 APBA3O96018 575 aa6.94□□□□□ -1.3
USP47-206ENST00000525367 CST3P01034 146 aaPredicted RBP6.94□□□□□ -1.3
USP47-206ENST00000525367 NFICP08651 508 aa6.94□□□□□ -1.3
USP47-206ENST00000525367 YARSP54577 528 aaKnown RBP6.94□□□□□ -1.3
USP47-206ENST00000525367 NFE2L2Q16236 605 aa6.94□□□□□ -1.3
USP47-206ENST00000525367 FXNQ16595 210 aa6.94□□□□□ -1.3
USP47-206ENST00000525367 RIN3Q8TB24 985 aa6.94□□□□□ -1.3
USP47-206ENST00000525367 SLC6A18Q96N87 628 aa6.94□□□□□ -1.3
USP47-206ENST00000525367 DNAJC7Q99615 494 aa6.94□□□□□ -1.3
USP47-206ENST00000525367 C9IYK1 514 aa6.93□□□□□ -1.3
USP47-206ENST00000525367 C9orf172C9J069 976 aa6.93□□□□□ -1.3
USP47-206ENST00000525367 USP11P51784 963 aa6.93□□□□□ -1.3
USP47-206ENST00000525367 NRG1Q02297 640 aaPredicted RBP6.93□□□□□ -1.3
USP47-206ENST00000525367 CDK5R2Q13319 367 aa6.93□□□□□ -1.3
USP47-206ENST00000525367 DOC2BQ14184 412 aa6.93□□□□□ -1.3
USP47-206ENST00000525367 VHLLQ6RSH7 139 aa6.93□□□□□ -1.3
USP47-206ENST00000525367 PPP1R3FQ6ZSY5 799 aaPredicted RBP6.93□□□□□ -1.3
USP47-206ENST00000525367 SPATC1Q76KD6 591 aa6.93□□□□□ -1.3
USP47-206ENST00000525367 PPP1R13LQ8WUF5 828 aa6.93□□□□□ -1.3
USP47-206ENST00000525367 FOXQ1Q9C009 403 aa6.93□□□□□ -1.3
USP47-206ENST00000525367 CWC22Q9HCG8 908 aaKnown RBP6.93□□□□□ -1.3
USP47-206ENST00000525367 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP6.92□□□□□ -1.3
USP47-206ENST00000525367 RGS13O14921 159 aa6.92□□□□□ -1.3
USP47-206ENST00000525367 PDPK1O15530 556 aa6.92□□□□□ -1.3
USP47-206ENST00000525367 DIAPH1O60610 1272 aaKnown RBP6.92□□□□□ -1.3
USP47-206ENST00000525367 TP53P04637 393 aaPredicted RBP6.92□□□□□ -1.3
USP47-206ENST00000525367 BMP3P12645 472 aa6.92□□□□□ -1.3
USP47-206ENST00000525367 INTS3Q68E01 1043 aaKnown RBP6.92□□□□□ -1.3
USP47-206ENST00000525367 KIAA1211LQ6NV74 962 aa6.92□□□□□ -1.3
USP47-206ENST00000525367 KRTAP19-1Q8IUB9 90 aa6.92□□□□□ -1.3
USP47-206ENST00000525367 LILRB2Q8N423 598 aa6.92□□□□□ -1.3
USP47-206ENST00000525367 CYB5D2Q8WUJ1 264 aa6.92□□□□□ -1.3
USP47-206ENST00000525367 UTP4Q969X6 686 aaKnown RBP6.92□□□□□ -1.3
USP47-206ENST00000525367 MIPEPQ99797 713 aa6.92□□□□□ -1.3
USP47-206ENST00000525367 CEP41Q9BYV8 373 aa6.92□□□□□ -1.3
USP47-206ENST00000525367 PFDN2Q9UHV9 154 aa6.92□□□□□ -1.3
USP47-206ENST00000525367 PCOLCE2Q9UKZ9 415 aa6.92□□□□□ -1.3
USP47-206ENST00000525367 ZNF214Q9UL59 606 aaPredicted RBP6.92□□□□□ -1.3
USP47-206ENST00000525367 KRTAP4-8A0A0G2JLE6 195 aa6.91□□□□□ -1.3
USP47-206ENST00000525367 SLITRK5O94991 958 aa6.91□□□□□ -1.3
USP47-206ENST00000525367 RXRBP28702 533 aa6.91□□□□□ -1.3
USP47-206ENST00000525367 GBP1P32455 592 aa6.91□□□□□ -1.3
USP47-206ENST00000525367 CAP2P40123 477 aa6.91□□□□□ -1.3
USP47-206ENST00000525367 GNPTABQ3T906 1256 aa6.91□□□□□ -1.3
USP47-206ENST00000525367 SDE2Q6IQ49 451 aa6.91□□□□□ -1.3
USP47-206ENST00000525367 ZNF662Q6ZS27 426 aa6.91□□□□□ -1.3
USP47-206ENST00000525367 DZIP1LQ8IYY4 767 aaKnown RBP6.91□□□□□ -1.3
USP47-206ENST00000525367 KCT2Q8NC54 265 aa6.91□□□□□ -1.3
USP47-206ENST00000525367 RNPC3Q96LT9 517 aaKnown RBP6.91□□□□□ -1.3
USP47-206ENST00000525367 MYRFLQ96LU7 910 aa6.91□□□□□ -1.3
USP47-206ENST00000525367 CCDC74BQ96LY2 380 aa6.91□□□□□ -1.3
USP47-206ENST00000525367 NACC1Q96RE7 527 aa6.91□□□□□ -1.3
USP47-206ENST00000525367 LGR4Q9BXB1 951 aa6.91□□□□□ -1.3
USP47-206ENST00000525367 CCDC113Q9H0I3 377 aa6.91□□□□□ -1.3
USP47-206ENST00000525367 TTBK1Q5TCY1 1321 aaPredicted RBP6.91□□□□□ -1.3
USP47-206ENST00000525367 BTBD11A6QL63 1104 aa6.9□□□□□ -1.3
USP47-206ENST00000525367 LRIG2O94898 1065 aa6.9□□□□□ -1.3
USP47-206ENST00000525367 MAP4P27816 1152 aaKnown RBP6.9□□□□□ -1.3
USP47-206ENST00000525367 RASGRF1Q13972 1273 aa6.9□□□□□ -1.3
USP47-206ENST00000525367 SEZ6L2Q6UXD5 910 aa6.9□□□□□ -1.3
USP47-206ENST00000525367 CDH24Q86UP0 819 aa6.9□□□□□ -1.3
USP47-206ENST00000525367 TXNRD3Q86VQ6 643 aa6.9□□□□□ -1.3
USP47-206ENST00000525367 SHISA5Q8N114 240 aa6.9□□□□□ -1.3
USP47-206ENST00000525367 DNAJB8Q8NHS0 232 aa6.9□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms