RNA–Protein interactions for RNA: ENST00000524922.1

CD44-212, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 352 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-212ENST00000524922 KSR1Q8IVT5 923 aa3.35□□□□□ -1.87
CD44-212ENST00000524922 PIWIL2Q8TC59 973 aaKnown RBP3.35□□□□□ -1.87
CD44-212ENST00000524922 XAGE3Q8WTP9 111 aa3.35□□□□□ -1.87
CD44-212ENST00000524922 KIRREL1Q96J84 757 aa3.35□□□□□ -1.87
CD44-212ENST00000524922 COX4I2Q96KJ9 171 aa3.35□□□□□ -1.87
CD44-212ENST00000524922 NOC4LQ9BVI4 516 aaKnown RBP3.35□□□□□ -1.87
CD44-212ENST00000524922 EBF1Q9UH73 591 aa3.35□□□□□ -1.87
CD44-212ENST00000524922 ADAM30Q9UKF2 790 aa3.35□□□□□ -1.87
CD44-212ENST00000524922 ZNF281Q9Y2X9 895 aa3.35□□□□□ -1.87
CD44-212ENST00000524922 CORINQ9Y5Q5 1042 aa3.35□□□□□ -1.87
CD44-212ENST00000524922 USP31Q70CQ4 1352 aa3.35□□□□□ -1.87
CD44-212ENST00000524922 CUX2O14529 1486 aa3.35□□□□□ -1.87
CD44-212ENST00000524922 UPK3BL1B0FP48 263 aa3.34□□□□□ -1.87
CD44-212ENST00000524922 UPK3BL2E5RIL1 263 aa3.34□□□□□ -1.87
CD44-212ENST00000524922 CBX7O95931 251 aa3.34□□□□□ -1.87
CD44-212ENST00000524922 EFEMP2O95967 443 aa3.34□□□□□ -1.87
CD44-212ENST00000524922 HPXP02790 462 aa3.34□□□□□ -1.87
CD44-212ENST00000524922 PGRP06401 933 aa3.34□□□□□ -1.87
CD44-212ENST00000524922 C1QTNF9P0C862 333 aa3.34□□□□□ -1.87
CD44-212ENST00000524922 GARTP22102 1010 aa3.34□□□□□ -1.87
CD44-212ENST00000524922 ST13P50502 369 aaKnown RBP3.34□□□□□ -1.87
CD44-212ENST00000524922 MAP3K11Q16584 847 aa3.34□□□□□ -1.87
CD44-212ENST00000524922 TSNAXIP1Q2TAA8 658 aa3.34□□□□□ -1.87
CD44-212ENST00000524922 ZNF746Q6NUN9 644 aaPredicted RBP3.34□□□□□ -1.87
CD44-212ENST00000524922 BNC2Q6ZN30 1099 aaPredicted RBP3.34□□□□□ -1.87
CD44-212ENST00000524922 CCDC84Q86UT8 332 aaPredicted RBP3.34□□□□□ -1.87
CD44-212ENST00000524922 DTWD2Q8NBA8 298 aa3.34□□□□□ -1.87
CD44-212ENST00000524922 VWCEQ96DN2 955 aa3.34□□□□□ -1.87
CD44-212ENST00000524922 RHOVQ96L33 236 aa3.34□□□□□ -1.87
CD44-212ENST00000524922 KRTAP4-11Q9BYQ6 195 aa3.34□□□□□ -1.87
CD44-212ENST00000524922 GPR62Q9BZJ7 368 aa3.34□□□□□ -1.87
CD44-212ENST00000524922 ADAMTS10Q9H324 1103 aa3.34□□□□□ -1.87
CD44-212ENST00000524922 CD320Q9NPF0 282 aa3.34□□□□□ -1.87
CD44-212ENST00000524922 ZSWIM5Q9P217 1185 aa3.34□□□□□ -1.87
CD44-212ENST00000524922 PARP2Q9UGN5 583 aa3.34□□□□□ -1.87
CD44-212ENST00000524922 CEP131Q9UPN4 1083 aa3.34□□□□□ -1.87
CD44-212ENST00000524922 POLR3KQ9Y2Y1 108 aaPredicted RBP3.34□□□□□ -1.87
CD44-212ENST00000524922 NOTOA8MTQ0 251 aa3.33□□□□□ -1.88
CD44-212ENST00000524922 MED14OSP0DP75 135 aa3.33□□□□□ -1.88
CD44-212ENST00000524922 TAGLNQ01995 201 aaKnown RBP3.33□□□□□ -1.88
CD44-212ENST00000524922 TIGD5Q53EQ6 642 aa3.33□□□□□ -1.88
CD44-212ENST00000524922 SND1Q7KZF4 910 aaKnown RBP eCLIP3.33□□□□□ -1.88
CD44-212ENST00000524922 TMPRSS7Q7RTY8 843 aa3.33□□□□□ -1.88
CD44-212ENST00000524922 TMC4Q7Z404 712 aa3.33□□□□□ -1.88
CD44-212ENST00000524922 SLFN12Q8IYM2 578 aa3.33□□□□□ -1.88
CD44-212ENST00000524922 MIR1-1HGQ9H1L0 117 aa3.33□□□□□ -1.88
CD44-212ENST00000524922 SLAMF8Q9P0V8 285 aa3.33□□□□□ -1.88
CD44-212ENST00000524922 TMEM59LQ9UK28 342 aa3.33□□□□□ -1.88
CD44-212ENST00000524922 LRRN2O75325 713 aa3.32□□□□□ -1.88
CD44-212ENST00000524922 F13A1P00488 732 aa3.32□□□□□ -1.88
CD44-212ENST00000524922 ZGLP1P0C6A0 271 aa3.32□□□□□ -1.88
CD44-212ENST00000524922 TRHRP34981 398 aaPredicted RBP3.32□□□□□ -1.88
CD44-212ENST00000524922 ETV3P41162 512 aa3.32□□□□□ -1.88
CD44-212ENST00000524922 TAF1CQ15572 869 aaPredicted RBP3.32□□□□□ -1.88
CD44-212ENST00000524922 TMEM67Q5HYA8 995 aa3.32□□□□□ -1.88
CD44-212ENST00000524922 SYDE1Q6ZW31 735 aaPredicted RBP3.32□□□□□ -1.88
CD44-212ENST00000524922 TTC6Q86TZ1 520 aa3.32□□□□□ -1.88
CD44-212ENST00000524922 TSPYL5Q86VY4 417 aaPredicted RBP3.32□□□□□ -1.88
CD44-212ENST00000524922 AMIGO3Q86WK7 504 aa3.32□□□□□ -1.88
CD44-212ENST00000524922 CYB5D2Q8WUJ1 264 aa3.32□□□□□ -1.88
CD44-212ENST00000524922 SHISA4Q96DD7 197 aa3.32□□□□□ -1.88
CD44-212ENST00000524922 FAM161BQ96MY7 647 aa3.32□□□□□ -1.88
CD44-212ENST00000524922 BICRAQ9NZM4 1560 aa3.31□□□□□ -1.88
CD44-212ENST00000524922 DCAF1Q9Y4B6 1507 aa3.31□□□□□ -1.88
CD44-212ENST00000524922 CECR2Q9BXF3 1484 aa3.31□□□□□ -1.88
CD44-212ENST00000524922 RBM47A0AV96 593 aaKnown RBP3.31□□□□□ -1.88
CD44-212ENST00000524922 SHISA3A0PJX4 238 aa3.31□□□□□ -1.88
CD44-212ENST00000524922 CYP7A1P22680 504 aa3.31□□□□□ -1.88
CD44-212ENST00000524922 GLDCP23378 1020 aa3.31□□□□□ -1.88
CD44-212ENST00000524922 TPP2P29144 1249 aaPredicted RBP3.31□□□□□ -1.88
CD44-212ENST00000524922 RAP1GAPP47736 663 aa3.31□□□□□ -1.88
CD44-212ENST00000524922 LMNB2Q03252 620 aa3.31□□□□□ -1.88
CD44-212ENST00000524922 CAMK2GQ13555 558 aaPredicted RBP3.31□□□□□ -1.88
CD44-212ENST00000524922 PKN1Q16512 942 aa3.31□□□□□ -1.88
CD44-212ENST00000524922 EAPPQ56P03 285 aaPredicted RBP3.31□□□□□ -1.88
CD44-212ENST00000524922 SIAH1Q8IUQ4 282 aa3.31□□□□□ -1.88
CD44-212ENST00000524922 LRRC56Q8IYG6 542 aaPredicted RBP3.31□□□□□ -1.88
CD44-212ENST00000524922 ABHD4Q8TB40 342 aa3.31□□□□□ -1.88
CD44-212ENST00000524922 RNF141Q8WVD5 230 aa3.31□□□□□ -1.88
CD44-212ENST00000524922 GATAD2BQ8WXI9 593 aa3.31□□□□□ -1.88
CD44-212ENST00000524922 SLC38A3Q99624 504 aa3.31□□□□□ -1.88
CD44-212ENST00000524922 G6PC3Q9BUM1 346 aa3.31□□□□□ -1.88
CD44-212ENST00000524922 KRTAP9-3Q9BYQ3 159 aa3.31□□□□□ -1.88
CD44-212ENST00000524922 RNF32Q9H0A6 362 aa3.31□□□□□ -1.88
CD44-212ENST00000524922 NSUN3Q9H649 340 aaKnown RBP3.31□□□□□ -1.88
CD44-212ENST00000524922 KCNQ5Q9NR82 932 aa3.31□□□□□ -1.88
CD44-212ENST00000524922 MYOCOSA0A1B0GUC4 107 aa3.3□□□□□ -1.88
CD44-212ENST00000524922 CHURC1-FNTBB4DL54 471 aa3.3□□□□□ -1.88
CD44-212ENST00000524922 F6X3S4 739 aa3.3□□□□□ -1.88
CD44-212ENST00000524922 PF4P02776 101 aa3.3□□□□□ -1.88
CD44-212ENST00000524922 RLBP1P12271 317 aa3.3□□□□□ -1.88
CD44-212ENST00000524922 CEBPAP49715 358 aaPredicted RBP3.3□□□□□ -1.88
CD44-212ENST00000524922 TEKQ02763 1124 aa3.3□□□□□ -1.88
CD44-212ENST00000524922 PDE4BQ07343 736 aa3.3□□□□□ -1.88
CD44-212ENST00000524922 NR0B2Q15466 257 aa3.3□□□□□ -1.88
CD44-212ENST00000524922 ERMP1Q7Z2K6 904 aa3.3□□□□□ -1.88
CD44-212ENST00000524922 CREG2Q8IUH2 290 aa3.3□□□□□ -1.88
CD44-212ENST00000524922 FBXO15Q8NCQ5 510 aaPredicted RBP3.3□□□□□ -1.88
CD44-212ENST00000524922 LINC01599Q8WXQ3 324 aa3.3□□□□□ -1.88
CD44-212ENST00000524922 JARID2Q92833 1246 aaPredicted RBP3.3□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms