RNA–Protein interactions for RNA: ENST00000524529.6

CNKSR1-209, Transcript of connector enhancer of kinase suppressor of Ras 1, humanhuman

TSL 4

Gene CNKSR1, Length 562 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR1-209ENST00000524529 CYP2B6P20813 491 aa11.7□□□□□ -0.54
CNKSR1-209ENST00000524529 ZYXQ15942 572 aaKnown RBP11.7□□□□□ -0.54
CNKSR1-209ENST00000524529 HSP90AB4PQ58FF6 505 aa11.7□□□□□ -0.54
CNKSR1-209ENST00000524529 SLC9C2Q5TAH2 1124 aa11.7□□□□□ -0.54
CNKSR1-209ENST00000524529 USP17L2Q6R6M4 530 aa11.7□□□□□ -0.54
CNKSR1-209ENST00000524529 CHRDL2Q6WN34 429 aa11.7□□□□□ -0.54
CNKSR1-209ENST00000524529 LCORLQ8N3X6 602 aa11.7□□□□□ -0.54
CNKSR1-209ENST00000524529 PPIL4Q8WUA2 492 aaKnown RBP eCLIP11.7□□□□□ -0.54
CNKSR1-209ENST00000524529 SDR42E1Q8WUS8 393 aa11.7□□□□□ -0.54
CNKSR1-209ENST00000524529 USP6NLQ92738 828 aa11.7□□□□□ -0.54
CNKSR1-209ENST00000524529 ZNFX1Q9P2E3 1918 aaKnown RBP11.7□□□□□ -0.54
CNKSR1-209ENST00000524529 MAGEB6P1A0A0J9YX57 407 aa11.69□□□□□ -0.54
CNKSR1-209ENST00000524529 TFRCP02786 760 aaKnown RBP11.69□□□□□ -0.54
CNKSR1-209ENST00000524529 ERVK-9P63128 1117 aa11.69□□□□□ -0.54
CNKSR1-209ENST00000524529 ERVK-24P63145 666 aa11.69□□□□□ -0.54
CNKSR1-209ENST00000524529 CCL14Q16627 93 aa11.69□□□□□ -0.54
CNKSR1-209ENST00000524529 CERKLQ49MI3 558 aaPredicted RBP11.69□□□□□ -0.54
CNKSR1-209ENST00000524529 MAP3K21Q5TCX8 1036 aa11.69□□□□□ -0.54
CNKSR1-209ENST00000524529 TTC6Q86TZ1 520 aa11.69□□□□□ -0.54
CNKSR1-209ENST00000524529 CERS3Q8IU89 383 aa11.69□□□□□ -0.54
CNKSR1-209ENST00000524529 CLASRPQ8N2M8 674 aaKnown RBP11.69□□□□□ -0.54
CNKSR1-209ENST00000524529 SLC44A5Q8NCS7 719 aa11.69□□□□□ -0.54
CNKSR1-209ENST00000524529 GPRC5AQ8NFJ5 357 aa11.69□□□□□ -0.54
CNKSR1-209ENST00000524529 PAWRQ96IZ0 340 aaKnown RBP11.69□□□□□ -0.54
CNKSR1-209ENST00000524529 DNAJC2Q99543 621 aaKnown RBP11.69□□□□□ -0.54
CNKSR1-209ENST00000524529 PAGR1Q9BTK6 254 aa11.69□□□□□ -0.54
CNKSR1-209ENST00000524529 BCL11AQ9H165 835 aa11.69□□□□□ -0.54
CNKSR1-209ENST00000524529 BOLA2Q9H3K6 86 aa11.69□□□□□ -0.54
CNKSR1-209ENST00000524529 DCP1AQ9NPI6 582 aaPredicted RBP11.69□□□□□ -0.54
CNKSR1-209ENST00000524529 RBM27Q9P2N5 1060 aaKnown RBP11.69□□□□□ -0.54
CNKSR1-209ENST00000524529 RPTORQ8N122 1335 aa11.68□□□□□ -0.54
CNKSR1-209ENST00000524529 COL11A1P12107 1806 aaPredicted RBP11.68□□□□□ -0.54
CNKSR1-209ENST00000524529 A0A1W2PRG0 241 aa11.68□□□□□ -0.54
CNKSR1-209ENST00000524529 PRKAB2O43741 272 aa11.68□□□□□ -0.54
CNKSR1-209ENST00000524529 HMMRO75330 724 aa11.68□□□□□ -0.54
CNKSR1-209ENST00000524529 VCAM1P19320 739 aa11.68□□□□□ -0.54
CNKSR1-209ENST00000524529 ADD2P35612 726 aa11.68□□□□□ -0.54
CNKSR1-209ENST00000524529 SEPT2Q15019 361 aa11.68□□□□□ -0.54
CNKSR1-209ENST00000524529 RAB3GAP1Q15042 981 aa11.68□□□□□ -0.54
CNKSR1-209ENST00000524529 TTF1Q15361 905 aaPredicted RBP11.68□□□□□ -0.54
CNKSR1-209ENST00000524529 ABCB5Q2M3G0 1257 aa11.68□□□□□ -0.54
CNKSR1-209ENST00000524529 KIAA1755Q5JYT7 1200 aa11.68□□□□□ -0.54
CNKSR1-209ENST00000524529 MORN1Q5T089 497 aa11.68□□□□□ -0.54
CNKSR1-209ENST00000524529 TMED8Q6PL24 325 aaPredicted RBP11.68□□□□□ -0.54
CNKSR1-209ENST00000524529 CATSPERGQ6ZRH7 1159 aa11.68□□□□□ -0.54
CNKSR1-209ENST00000524529 GPR142Q7Z601 462 aa11.68□□□□□ -0.54
CNKSR1-209ENST00000524529 HTATIP2Q9BUP3 242 aa11.68□□□□□ -0.54
CNKSR1-209ENST00000524529 KIAA1683Q9H0B3 1180 aa11.68□□□□□ -0.54
CNKSR1-209ENST00000524529 ARMT1Q9H993 441 aa11.68□□□□□ -0.54
CNKSR1-209ENST00000524529 BTBD7Q9P203 1132 aa11.68□□□□□ -0.54
CNKSR1-209ENST00000524529 A0A0G2JMZ2 1700 aa11.68□□□□□ -0.54
CNKSR1-209ENST00000524529 SMARCA5O60264 1052 aaPredicted RBP11.67□□□□□ -0.54
CNKSR1-209ENST00000524529 RAB11FIP3O75154 756 aa11.67□□□□□ -0.54
CNKSR1-209ENST00000524529 POLR3DP05423 398 aaPredicted RBP11.67□□□□□ -0.54
CNKSR1-209ENST00000524529 IFIT2P09913 472 aaKnown RBP11.67□□□□□ -0.54
CNKSR1-209ENST00000524529 DYNLL2Q96FJ2 89 aa11.67□□□□□ -0.54
CNKSR1-209ENST00000524529 FEZ1Q99689 392 aa11.67□□□□□ -0.54
CNKSR1-209ENST00000524529 NUDT12Q9BQG2 462 aa11.67□□□□□ -0.54
CNKSR1-209ENST00000524529 HMX1Q9NP08 348 aaPredicted RBP11.67□□□□□ -0.54
CNKSR1-209ENST00000524529 MCM9Q9NXL9 1143 aa11.67□□□□□ -0.54
CNKSR1-209ENST00000524529 PCDHB15Q9Y5E8 787 aa11.67□□□□□ -0.54
CNKSR1-209ENST00000524529 SMCHD1A6NHR9 2005 aa11.67□□□□□ -0.54
CNKSR1-209ENST00000524529 CYP2D7A0A087X1C5 515 aa11.66□□□□□ -0.54
CNKSR1-209ENST00000524529 SPDYE16A6NNV3 312 aaPredicted RBP11.66□□□□□ -0.54
CNKSR1-209ENST00000524529 USP17L15C9J2P7 530 aa11.66□□□□□ -0.54
CNKSR1-209ENST00000524529 USP17L13C9JLJ4 530 aa11.66□□□□□ -0.54
CNKSR1-209ENST00000524529 USP17L11C9JVI0 530 aa11.66□□□□□ -0.54
CNKSR1-209ENST00000524529 USP17L18D6R9N7 530 aa11.66□□□□□ -0.54
CNKSR1-209ENST00000524529 USP17L22D6RA61 530 aa11.66□□□□□ -0.54
CNKSR1-209ENST00000524529 USP17L17D6RBQ6 530 aa11.66□□□□□ -0.54
CNKSR1-209ENST00000524529 USP17L19D6RCP7 530 aa11.66□□□□□ -0.54
CNKSR1-209ENST00000524529 USP17L20D6RJB6 530 aa11.66□□□□□ -0.54
CNKSR1-209ENST00000524529 XRCC5P13010 732 aaKnown RBP11.66□□□□□ -0.54
CNKSR1-209ENST00000524529 PRKAR2AP13861 404 aaKnown RBP11.66□□□□□ -0.54
CNKSR1-209ENST00000524529 ATP5JP18859 108 aa11.66□□□□□ -0.54
CNKSR1-209ENST00000524529 MAPK4P31152 587 aa11.66□□□□□ -0.54
CNKSR1-209ENST00000524529 CACNB2Q08289 660 aaPredicted RBP11.66□□□□□ -0.54
CNKSR1-209ENST00000524529 USP17L24Q0WX57 530 aa11.66□□□□□ -0.54
CNKSR1-209ENST00000524529 LBX2Q6XYB7 198 aa11.66□□□□□ -0.54
CNKSR1-209ENST00000524529 CLEC10AQ8IUN9 316 aa11.66□□□□□ -0.54
CNKSR1-209ENST00000524529 SIAH1Q8IUQ4 282 aa11.66□□□□□ -0.54
CNKSR1-209ENST00000524529 SOCS4Q8WXH5 440 aa11.66□□□□□ -0.54
CNKSR1-209ENST00000524529 HAUS7Q99871 368 aa11.66□□□□□ -0.54
CNKSR1-209ENST00000524529 CRNKL1Q9BZJ0 848 aaKnown RBP11.66□□□□□ -0.54
CNKSR1-209ENST00000524529 RPAP3Q9H6T3 665 aaPredicted RBP11.66□□□□□ -0.54
CNKSR1-209ENST00000524529 PAG1Q9NWQ8 432 aa11.66□□□□□ -0.54
CNKSR1-209ENST00000524529 FLRT1Q9NZU1 646 aa11.66□□□□□ -0.54
CNKSR1-209ENST00000524529 OGDHLQ9ULD0 1010 aa11.66□□□□□ -0.54
CNKSR1-209ENST00000524529 RABGAP1Q9Y3P9 1069 aa11.66□□□□□ -0.54
CNKSR1-209ENST00000524529 COL6A3P12111 3177 aa11.66□□□□□ -0.54
CNKSR1-209ENST00000524529 LAMA3Q16787 3333 aa11.66□□□□□ -0.54
CNKSR1-209ENST00000524529 GREB1LQ9C091 1923 aaPredicted RBP11.66□□□□□ -0.54
CNKSR1-209ENST00000524529 MBD4O95243 580 aa11.65□□□□□ -0.54
CNKSR1-209ENST00000524529 CCND3P30281 292 aaPredicted RBP11.65□□□□□ -0.54
CNKSR1-209ENST00000524529 PLEKHH3Q7Z736 793 aa11.65□□□□□ -0.54
CNKSR1-209ENST00000524529 EXOC6Q8TAG9 804 aa11.65□□□□□ -0.54
CNKSR1-209ENST00000524529 GTF3C2Q8WUA4 911 aaPredicted RBP11.65□□□□□ -0.54
CNKSR1-209ENST00000524529 CABP5Q9NP86 173 aa11.65□□□□□ -0.54
CNKSR1-209ENST00000524529 PFASO15067 1338 aa11.64□□□□□ -0.55
CNKSR1-209ENST00000524529 EVI5O60447 810 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms