RNA–Protein interactions for RNA: ENST00000524523.1

CTR9-202, Transcript of CTR9 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 5

Gene CTR9, Length 902 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTR9-202ENST00000524523 ARAP2Q8WZ64 1704 aa8.85□□□□□ -0.99
CTR9-202ENST00000524523 SBF2Q86WG5 1849 aa8.85□□□□□ -0.99
CTR9-202ENST00000524523 FOXP2O15409 715 aa8.85□□□□□ -0.99
CTR9-202ENST00000524523 HIBADHP31937 336 aaKnown RBP8.85□□□□□ -0.99
CTR9-202ENST00000524523 DEKP35659 375 aaKnown RBP8.85□□□□□ -0.99
CTR9-202ENST00000524523 NR1H3Q13133 447 aa8.85□□□□□ -0.99
CTR9-202ENST00000524523 CCDC129Q6ZRS4 1044 aa8.85□□□□□ -0.99
CTR9-202ENST00000524523 Q6ZUG5 572 aa8.85□□□□□ -0.99
CTR9-202ENST00000524523 SMARCC2Q8TAQ2 1214 aa8.85□□□□□ -0.99
CTR9-202ENST00000524523 WDR66Q8TBY9 1149 aa8.85□□□□□ -0.99
CTR9-202ENST00000524523 GTF3C6Q969F1 213 aa8.85□□□□□ -0.99
CTR9-202ENST00000524523 KIFC2Q96AC6 838 aa8.85□□□□□ -0.99
CTR9-202ENST00000524523 ITPKCQ96DU7 683 aa8.85□□□□□ -0.99
CTR9-202ENST00000524523 RBM17Q96I25 401 aaKnown RBP8.85□□□□□ -0.99
CTR9-202ENST00000524523 KRT23Q9C075 422 aa8.85□□□□□ -0.99
CTR9-202ENST00000524523 RNF41Q9H4P4 317 aaPredicted RBP8.85□□□□□ -0.99
CTR9-202ENST00000524523 ZSCAN16Q9H4T2 348 aaPredicted RBP8.85□□□□□ -0.99
CTR9-202ENST00000524523 LMBRD1Q9NUN5 540 aa8.85□□□□□ -0.99
CTR9-202ENST00000524523 PGPEP1Q9NXJ5 209 aa8.85□□□□□ -0.99
CTR9-202ENST00000524523 LRP2BPQ9P2M1 347 aa8.85□□□□□ -0.99
CTR9-202ENST00000524523 ANAPC4Q9UJX5 808 aa8.85□□□□□ -0.99
CTR9-202ENST00000524523 XDHP47989 1333 aa8.84□□□□□ -0.99
CTR9-202ENST00000524523 NPHP1O15259 732 aa8.84□□□□□ -0.99
CTR9-202ENST00000524523 TRIM37O94972 964 aa8.84□□□□□ -0.99
CTR9-202ENST00000524523 SERPINB2P05120 415 aa8.84□□□□□ -0.99
CTR9-202ENST00000524523 NCLP19338 710 aaKnown RBP8.84□□□□□ -0.99
CTR9-202ENST00000524523 ATP2B4P23634 1241 aa8.84□□□□□ -0.99
CTR9-202ENST00000524523 RXRBP28702 533 aa8.84□□□□□ -0.99
CTR9-202ENST00000524523 GJB2P29033 226 aa8.84□□□□□ -0.99
CTR9-202ENST00000524523 LIFRP42702 1097 aa8.84□□□□□ -0.99
CTR9-202ENST00000524523 MCCD1P59942 119 aaPredicted RBP8.84□□□□□ -0.99
CTR9-202ENST00000524523 FGD1P98174 961 aa8.84□□□□□ -0.99
CTR9-202ENST00000524523 LARP1BQ659C4 914 aaKnown RBP8.84□□□□□ -0.99
CTR9-202ENST00000524523 NAA16Q6N069 864 aaPredicted RBP8.84□□□□□ -0.99
CTR9-202ENST00000524523 BICDL1Q6ZP65 573 aa8.84□□□□□ -0.99
CTR9-202ENST00000524523 RALYLQ86SE5 291 aaKnown RBP8.84□□□□□ -0.99
CTR9-202ENST00000524523 MB21D2Q8IYB1 491 aaPredicted RBP8.84□□□□□ -0.99
CTR9-202ENST00000524523 CELF1Q92879 486 aaKnown RBP8.84□□□□□ -0.99
CTR9-202ENST00000524523 BRIP1Q9BX63 1249 aa8.84□□□□□ -0.99
CTR9-202ENST00000524523 ZFAND3Q9H8U3 227 aa8.84□□□□□ -0.99
CTR9-202ENST00000524523 PCDHB9Q9Y5E1 797 aa8.84□□□□□ -0.99
CTR9-202ENST00000524523 TAF1LQ8IZX4 1826 aa8.84□□□□□ -0.99
CTR9-202ENST00000524523 AKAP11Q9UKA4 1901 aa8.84□□□□□ -1
CTR9-202ENST00000524523 LETM1O95202 739 aaPredicted RBP8.83□□□□□ -1
CTR9-202ENST00000524523 F13A1P00488 732 aa8.83□□□□□ -1
CTR9-202ENST00000524523 BMP1P13497 986 aa8.83□□□□□ -1
CTR9-202ENST00000524523 KCNQ4P56696 695 aa8.83□□□□□ -1
CTR9-202ENST00000524523 GSTO1P78417 241 aa8.83□□□□□ -1
CTR9-202ENST00000524523 FAM182BQ5T319 152 aa8.83□□□□□ -1
CTR9-202ENST00000524523 PPP1R26Q5T8A7 1209 aaPredicted RBP8.83□□□□□ -1
CTR9-202ENST00000524523 MCTP1Q6DN14 999 aa8.83□□□□□ -1
CTR9-202ENST00000524523 PRR5LQ6MZQ0 368 aa8.83□□□□□ -1
CTR9-202ENST00000524523 PI16Q6UXB8 463 aa8.83□□□□□ -1
CTR9-202ENST00000524523 STOX1Q6ZVD7 989 aa8.83□□□□□ -1
CTR9-202ENST00000524523 SGMS1Q86VZ5 419 aa8.83□□□□□ -1
CTR9-202ENST00000524523 CCDC83Q8IWF9 413 aa8.83□□□□□ -1
CTR9-202ENST00000524523 IFNL3Q8IZI9 196 aa8.83□□□□□ -1
CTR9-202ENST00000524523 MAGEB6Q8N7X4 407 aa8.83□□□□□ -1
CTR9-202ENST00000524523 TDRD7Q8NHU6 1098 aaKnown RBP8.83□□□□□ -1
CTR9-202ENST00000524523 SYAP1Q96A49 352 aaPredicted RBP8.83□□□□□ -1
CTR9-202ENST00000524523 ATP8A2Q9NTI2 1148 aa8.83□□□□□ -1
CTR9-202ENST00000524523 SUGT1Q9Y2Z0 365 aa8.83□□□□□ -1
CTR9-202ENST00000524523 DDX49Q9Y6V7 483 aaKnown RBP8.83□□□□□ -1
CTR9-202ENST00000524523 ELP1O95163 1332 aa8.82□□□□□ -1
CTR9-202ENST00000524523 IRS2Q9Y4H2 1338 aa8.82□□□□□ -1
CTR9-202ENST00000524523 FSD2A1L4K1 749 aa8.82□□□□□ -1
CTR9-202ENST00000524523 GSG1L2A8MUP6 293 aa8.82□□□□□ -1
CTR9-202ENST00000524523 POLRMTO00411 1230 aaKnown RBP8.82□□□□□ -1
CTR9-202ENST00000524523 LDHCP07864 332 aa8.82□□□□□ -1
CTR9-202ENST00000524523 FGRP09769 529 aa8.82□□□□□ -1
CTR9-202ENST00000524523 CPA1P15085 419 aa8.82□□□□□ -1
CTR9-202ENST00000524523 PDIA3P30101 505 aaKnown RBP8.82□□□□□ -1
CTR9-202ENST00000524523 ALDH1B1P30837 517 aa8.82□□□□□ -1
CTR9-202ENST00000524523 PKP1Q13835 747 aa8.82□□□□□ -1
CTR9-202ENST00000524523 MCM6Q14566 821 aa8.82□□□□□ -1
CTR9-202ENST00000524523 INTS6LQ5JSJ4 861 aaKnown RBP8.82□□□□□ -1
CTR9-202ENST00000524523 ZNF804AQ7Z570 1209 aa8.82□□□□□ -1
CTR9-202ENST00000524523 SP8Q8IXZ3 490 aa8.82□□□□□ -1
CTR9-202ENST00000524523 STAG1Q8WVM7 1258 aa8.82□□□□□ -1
CTR9-202ENST00000524523 RPGRQ92834 1020 aaKnown RBP8.82□□□□□ -1
CTR9-202ENST00000524523 BRF1Q92994 677 aa8.82□□□□□ -1
CTR9-202ENST00000524523 SCAND2PQ9GZW5 306 aaPredicted RBP8.82□□□□□ -1
CTR9-202ENST00000524523 NAPBQ9H115 298 aa8.82□□□□□ -1
CTR9-202ENST00000524523 WWC3Q9ULE0 1092 aa8.82□□□□□ -1
CTR9-202ENST00000524523 ANGEL1Q9UNK9 670 aaKnown RBP8.82□□□□□ -1
CTR9-202ENST00000524523 MTMR6Q9Y217 621 aa8.82□□□□□ -1
CTR9-202ENST00000524523 TAF6LQ9Y6J9 622 aa8.82□□□□□ -1
CTR9-202ENST00000524523 GPR37L1O60883 481 aa8.81□□□□□ -1
CTR9-202ENST00000524523 CDKL5O76039 1030 aa8.81□□□□□ -1
CTR9-202ENST00000524523 UPP2O95045 317 aa8.81□□□□□ -1
CTR9-202ENST00000524523 LARGE1O95461 756 aa8.81□□□□□ -1
CTR9-202ENST00000524523 CHGBP05060 677 aa8.81□□□□□ -1
CTR9-202ENST00000524523 APPP05067 770 aa8.81□□□□□ -1
CTR9-202ENST00000524523 IL1R1P14778 569 aa8.81□□□□□ -1
CTR9-202ENST00000524523 CYP7A1P22680 504 aa8.81□□□□□ -1
CTR9-202ENST00000524523 PDE6BP35913 854 aa8.81□□□□□ -1
CTR9-202ENST00000524523 MRE11P49959 708 aa8.81□□□□□ -1
CTR9-202ENST00000524523 ZNF445P59923 1031 aa8.81□□□□□ -1
CTR9-202ENST00000524523 SART3Q15020 963 aaKnown RBP8.81□□□□□ -1
CTR9-202ENST00000524523 SBK1Q52WX2 424 aa8.81□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 112.2 ms