RNA–Protein interactions for RNA: ENST00000524478.1

MMP3-203, Transcript of matrix metallopeptidase 3, humanhuman

TSL 4

Gene MMP3, Length 559 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP3-203ENST00000524478 METTL16Q86W50 562 aaKnown RBP11.68□□□□□ -0.54
MMP3-203ENST00000524478 SPATA5Q8NB90 893 aa11.68□□□□□ -0.54
MMP3-203ENST00000524478 DDX20Q9UHI6 824 aaKnown RBP11.68□□□□□ -0.54
MMP3-203ENST00000524478 NDUFB9Q9Y6M9 179 aa11.68□□□□□ -0.54
MMP3-203ENST00000524478 ZNFX1Q9P2E3 1918 aaKnown RBP11.68□□□□□ -0.54
MMP3-203ENST00000524478 USP17L10C9JJH3 530 aa11.67□□□□□ -0.54
MMP3-203ENST00000524478 DNM1LO00429 736 aa11.67□□□□□ -0.54
MMP3-203ENST00000524478 GRB14Q14449 540 aa11.67□□□□□ -0.54
MMP3-203ENST00000524478 MAPKAPK5Q8IW41 473 aa11.67□□□□□ -0.54
MMP3-203ENST00000524478 USP38Q8NB14 1042 aa11.67□□□□□ -0.54
MMP3-203ENST00000524478 LBHD1Q9BQE6 289 aaPredicted RBP11.67□□□□□ -0.54
MMP3-203ENST00000524478 SEMA6BQ9H3T3 888 aa11.67□□□□□ -0.54
MMP3-203ENST00000524478 PDLIM7Q9NR12 457 aa11.67□□□□□ -0.54
MMP3-203ENST00000524478 SMC4Q9NTJ3 1288 aa11.67□□□□□ -0.54
MMP3-203ENST00000524478 AATFQ9NY61 560 aaKnown RBP eCLIP11.67□□□□□ -0.54
MMP3-203ENST00000524478 RAI14Q9P0K7 980 aa11.67□□□□□ -0.54
MMP3-203ENST00000524478 PI4KBQ9UBF8 816 aa11.67□□□□□ -0.54
MMP3-203ENST00000524478 GBF1Q92538 1859 aa11.67□□□□□ -0.54
MMP3-203ENST00000524478 CYP2C19P33261 490 aa11.66□□□□□ -0.54
MMP3-203ENST00000524478 GSTO1P78417 241 aa11.66□□□□□ -0.54
MMP3-203ENST00000524478 SNX17Q15036 470 aa11.66□□□□□ -0.54
MMP3-203ENST00000524478 NPLOC4Q8TAT6 608 aa11.66□□□□□ -0.54
MMP3-203ENST00000524478 GTF3C2Q8WUA4 911 aaPredicted RBP11.66□□□□□ -0.54
MMP3-203ENST00000524478 LPAR1Q92633 364 aa11.66□□□□□ -0.54
MMP3-203ENST00000524478 C12orf42Q96LP6 360 aa11.66□□□□□ -0.54
MMP3-203ENST00000524478 ATP11BQ9Y2G3 1177 aa11.66□□□□□ -0.54
MMP3-203ENST00000524478 SPDYE16A6NNV3 312 aaPredicted RBP11.65□□□□□ -0.54
MMP3-203ENST00000524478 C19orf81C9J6K1 198 aa11.65□□□□□ -0.54
MMP3-203ENST00000524478 LDHCP07864 332 aa11.65□□□□□ -0.54
MMP3-203ENST00000524478 HOXC6P09630 235 aa11.65□□□□□ -0.54
MMP3-203ENST00000524478 VCAM1P19320 739 aa11.65□□□□□ -0.54
MMP3-203ENST00000524478 MTX1Q13505 466 aa11.65□□□□□ -0.54
MMP3-203ENST00000524478 ZYXQ15942 572 aaKnown RBP11.65□□□□□ -0.54
MMP3-203ENST00000524478 ALDH1L2Q3SY69 923 aa11.65□□□□□ -0.54
MMP3-203ENST00000524478 TRIM60Q495X7 471 aa11.65□□□□□ -0.54
MMP3-203ENST00000524478 GJC2Q5T442 439 aaPredicted RBP11.65□□□□□ -0.54
MMP3-203ENST00000524478 SH3RF1Q7Z6J0 888 aa11.65□□□□□ -0.54
MMP3-203ENST00000524478 TGFBRAP1Q8WUH2 860 aa11.65□□□□□ -0.54
MMP3-203ENST00000524478 DHX36Q9H2U1 1008 aaKnown RBP11.65□□□□□ -0.54
MMP3-203ENST00000524478 PPP4R2Q9NY27 417 aa11.65□□□□□ -0.54
MMP3-203ENST00000524478 BTBD7Q9P203 1132 aa11.65□□□□□ -0.54
MMP3-203ENST00000524478 SAP30BPQ9UHR5 308 aaKnown RBP11.65□□□□□ -0.54
MMP3-203ENST00000524478 PALD1Q9ULE6 856 aa11.65□□□□□ -0.54
MMP3-203ENST00000524478 RABGAP1Q9Y3P9 1069 aa11.65□□□□□ -0.54
MMP3-203ENST00000524478 TRIM43BA6NCK2 446 aa11.64□□□□□ -0.55
MMP3-203ENST00000524478 SLC15A5A6NIM6 579 aa11.64□□□□□ -0.55
MMP3-203ENST00000524478 SRGAP3O43295 1099 aa11.64□□□□□ -0.55
MMP3-203ENST00000524478 GH2P01242 217 aa11.64□□□□□ -0.55
MMP3-203ENST00000524478 FOSL2P15408 326 aa11.64□□□□□ -0.55
MMP3-203ENST00000524478 PTPREP23469 700 aa11.64□□□□□ -0.55
MMP3-203ENST00000524478 IRX6P78412 446 aaPredicted RBP11.64□□□□□ -0.55
MMP3-203ENST00000524478 MFSD14CQ5VZR4 134 aa11.64□□□□□ -0.55
MMP3-203ENST00000524478 USP17L2Q6R6M4 530 aa11.64□□□□□ -0.55
MMP3-203ENST00000524478 BADQ92934 168 aa11.64□□□□□ -0.55
MMP3-203ENST00000524478 TRIM43Q96BQ3 446 aaPredicted RBP11.64□□□□□ -0.55
MMP3-203ENST00000524478 EDC3Q96F86 508 aaKnown RBP11.64□□□□□ -0.55
MMP3-203ENST00000524478 PRDM5Q9NQX1 630 aaPredicted RBP11.64□□□□□ -0.55
MMP3-203ENST00000524478 RAPGEFL1Q9UHV5 662 aa11.64□□□□□ -0.55
MMP3-203ENST00000524478 AKAP2Q9Y2D5 859 aa11.64□□□□□ -0.55
MMP3-203ENST00000524478 MSCO60682 206 aa11.63□□□□□ -0.55
MMP3-203ENST00000524478 ITGB8P26012 769 aa11.63□□□□□ -0.55
MMP3-203ENST00000524478 EPHB4P54760 987 aa11.63□□□□□ -0.55
MMP3-203ENST00000524478 SMAD3P84022 425 aaKnown RBP11.63□□□□□ -0.55
MMP3-203ENST00000524478 WDR78Q5VTH9 848 aa11.63□□□□□ -0.55
MMP3-203ENST00000524478 ANO1Q5XXA6 986 aa11.63□□□□□ -0.55
MMP3-203ENST00000524478 NAA16Q6N069 864 aaPredicted RBP11.63□□□□□ -0.55
MMP3-203ENST00000524478 LBX2Q6XYB7 198 aa11.63□□□□□ -0.55
MMP3-203ENST00000524478 CCAR1Q8IX12 1150 aaKnown RBP11.63□□□□□ -0.55
MMP3-203ENST00000524478 CRACR2BQ8N4Y2 399 aaPredicted RBP11.63□□□□□ -0.55
MMP3-203ENST00000524478 NEUROD6Q96NK8 337 aa11.63□□□□□ -0.55
MMP3-203ENST00000524478 SNRKQ9NRH2 765 aa11.63□□□□□ -0.55
MMP3-203ENST00000524478 GINM1Q9NU53 330 aa11.63□□□□□ -0.55
MMP3-203ENST00000524478 PRKAG2Q9UGJ0 569 aa11.63□□□□□ -0.55
MMP3-203ENST00000524478 MCM3APO60318 1980 aa11.63□□□□□ -0.55
MMP3-203ENST00000524478 CNGA1P29973 690 aa11.62□□□□□ -0.55
MMP3-203ENST00000524478 PPP4CP60510 307 aa11.62□□□□□ -0.55
MMP3-203ENST00000524478 CCNA1P78396 465 aa11.62□□□□□ -0.55
MMP3-203ENST00000524478 CATSPERGQ6ZRH7 1159 aa11.62□□□□□ -0.55
MMP3-203ENST00000524478 ACER1Q8TDN7 264 aa11.62□□□□□ -0.55
MMP3-203ENST00000524478 FEZ1Q99689 392 aa11.62□□□□□ -0.55
MMP3-203ENST00000524478 CWC22Q9HCG8 908 aaKnown RBP11.62□□□□□ -0.55
MMP3-203ENST00000524478 PIH1D3Q9NQM4 214 aaKnown RBP11.62□□□□□ -0.55
MMP3-203ENST00000524478 LRP2BPQ9P2M1 347 aa11.62□□□□□ -0.55
MMP3-203ENST00000524478 NOB1Q9ULX3 412 aaKnown RBP11.62□□□□□ -0.55
MMP3-203ENST00000524478 BAZ2AQ9UIF9 1905 aaKnown RBP11.61□□□□□ -0.55
MMP3-203ENST00000524478 USP17L15C9J2P7 530 aa11.61□□□□□ -0.55
MMP3-203ENST00000524478 USP17L13C9JLJ4 530 aa11.61□□□□□ -0.55
MMP3-203ENST00000524478 USP17L11C9JVI0 530 aa11.61□□□□□ -0.55
MMP3-203ENST00000524478 USP17L18D6R9N7 530 aa11.61□□□□□ -0.55
MMP3-203ENST00000524478 USP17L22D6RA61 530 aa11.61□□□□□ -0.55
MMP3-203ENST00000524478 USP17L17D6RBQ6 530 aa11.61□□□□□ -0.55
MMP3-203ENST00000524478 USP17L19D6RCP7 530 aa11.61□□□□□ -0.55
MMP3-203ENST00000524478 USP17L20D6RJB6 530 aa11.61□□□□□ -0.55
MMP3-203ENST00000524478 CYP2E1P05181 493 aaPredicted RBP11.61□□□□□ -0.55
MMP3-203ENST00000524478 PLCG2P16885 1265 aa11.61□□□□□ -0.55
MMP3-203ENST00000524478 GUCY1A2P33402 732 aa11.61□□□□□ -0.55
MMP3-203ENST00000524478 DYNLL1P63167 89 aaKnown RBP11.61□□□□□ -0.55
MMP3-203ENST00000524478 USP17L24Q0WX57 530 aa11.61□□□□□ -0.55
MMP3-203ENST00000524478 FAM47AQ5JRC9 791 aa11.61□□□□□ -0.55
MMP3-203ENST00000524478 SLC39A5Q6ZMH5 540 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms