RNA–Protein interactions for RNA: ENST00000524454.1

VPS11-201, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 2

Gene VPS11, Length 626 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-201ENST00000524454 CSRNP1Q96S65 589 aa8.36□□□□□ -1.07
VPS11-201ENST00000524454 BEGAINQ9BUH8 593 aa8.36□□□□□ -1.07
VPS11-201ENST00000524454 MRIQ9BWK5 157 aa8.36□□□□□ -1.07
VPS11-201ENST00000524454 ELP3Q9H9T3 547 aa8.36□□□□□ -1.07
VPS11-201ENST00000524454 DDX4Q9NQI0 724 aaKnown RBP8.36□□□□□ -1.07
VPS11-201ENST00000524454 LRP2BPQ9P2M1 347 aa8.36□□□□□ -1.07
VPS11-201ENST00000524454 FAM198AQ9UFP1 575 aa8.36□□□□□ -1.07
VPS11-201ENST00000524454 SIPA1L1O43166 1804 aa8.36□□□□□ -1.07
VPS11-201ENST00000524454 SPDYE16A6NNV3 312 aaPredicted RBP8.35□□□□□ -1.07
VPS11-201ENST00000524454 TRPA1O75762 1119 aa8.35□□□□□ -1.07
VPS11-201ENST00000524454 RPS6KB1P23443 525 aa8.35□□□□□ -1.07
VPS11-201ENST00000524454 IREB2P48200 963 aaKnown RBP8.35□□□□□ -1.07
VPS11-201ENST00000524454 MAP3K12Q12852 859 aa8.35□□□□□ -1.07
VPS11-201ENST00000524454 VGLL4Q14135 290 aa8.35□□□□□ -1.07
VPS11-201ENST00000524454 ALX1Q15699 326 aa8.35□□□□□ -1.07
VPS11-201ENST00000524454 SPRYD7Q5W111 196 aa8.35□□□□□ -1.07
VPS11-201ENST00000524454 SH3BP5LQ7L8J4 393 aa8.35□□□□□ -1.07
VPS11-201ENST00000524454 SH3RF3Q8TEJ3 882 aaPredicted RBP8.35□□□□□ -1.07
VPS11-201ENST00000524454 ZKSCAN4Q969J2 545 aaPredicted RBP8.35□□□□□ -1.07
VPS11-201ENST00000524454 SLC10A4Q96EP9 437 aa8.35□□□□□ -1.07
VPS11-201ENST00000524454 EDC3Q96F86 508 aaKnown RBP8.35□□□□□ -1.07
VPS11-201ENST00000524454 WNK4Q96J92 1243 aa8.35□□□□□ -1.07
VPS11-201ENST00000524454 JAKMIP1Q96N16 626 aaKnown RBP8.35□□□□□ -1.07
VPS11-201ENST00000524454 MTA3Q9BTC8 594 aa8.35□□□□□ -1.07
VPS11-201ENST00000524454 AGXT2Q9BYV1 514 aa8.35□□□□□ -1.07
VPS11-201ENST00000524454 PDRG1Q9NUG6 133 aa8.35□□□□□ -1.07
VPS11-201ENST00000524454 RNF186Q9NXI6 227 aa8.35□□□□□ -1.07
VPS11-201ENST00000524454 ISY1Q9ULR0 285 aaKnown RBP8.35□□□□□ -1.07
VPS11-201ENST00000524454 ATAD5Q96QE3 1844 aa8.35□□□□□ -1.07
VPS11-201ENST00000524454 DDTLA6NHG4 134 aaPredicted RBP8.34□□□□□ -1.07
VPS11-201ENST00000524454 FAM196BA6NMK8 535 aa8.34□□□□□ -1.07
VPS11-201ENST00000524454 WDHD1O75717 1129 aaPredicted RBP8.34□□□□□ -1.07
VPS11-201ENST00000524454 IDH1O75874 414 aaKnown RBP8.34□□□□□ -1.07
VPS11-201ENST00000524454 HSPD1P10809 573 aaKnown RBP8.34□□□□□ -1.07
VPS11-201ENST00000524454 PDCP20941 246 aa8.34□□□□□ -1.07
VPS11-201ENST00000524454 FOSBP53539 338 aa8.34□□□□□ -1.07
VPS11-201ENST00000524454 AK2P54819 239 aa8.34□□□□□ -1.07
VPS11-201ENST00000524454 RHBDL3P58872 404 aa8.34□□□□□ -1.07
VPS11-201ENST00000524454 DYNLL1P63167 89 aaKnown RBP8.34□□□□□ -1.07
VPS11-201ENST00000524454 MAP3K11Q16584 847 aa8.34□□□□□ -1.07
VPS11-201ENST00000524454 SLC4A8Q2Y0W8 1093 aa8.34□□□□□ -1.07
VPS11-201ENST00000524454 NAA16Q6N069 864 aaPredicted RBP8.34□□□□□ -1.07
VPS11-201ENST00000524454 PPP1R3FQ6ZSY5 799 aaPredicted RBP8.34□□□□□ -1.07
VPS11-201ENST00000524454 FAM83AQ86UY5 434 aa8.34□□□□□ -1.07
VPS11-201ENST00000524454 CERS3Q8IU89 383 aa8.34□□□□□ -1.07
VPS11-201ENST00000524454 TNS4Q8IZW8 715 aa8.34□□□□□ -1.07
VPS11-201ENST00000524454 FAM151AQ8WW52 585 aa8.34□□□□□ -1.07
VPS11-201ENST00000524454 TNPO1Q92973 898 aaKnown RBP8.34□□□□□ -1.07
VPS11-201ENST00000524454 OPTNQ96CV9 577 aa8.34□□□□□ -1.07
VPS11-201ENST00000524454 WRNIP1Q96S55 665 aa8.34□□□□□ -1.07
VPS11-201ENST00000524454 UPF3BQ9BZI7 483 aaKnown RBP8.34□□□□□ -1.07
VPS11-201ENST00000524454 AATFQ9NY61 560 aaKnown RBP eCLIP8.34□□□□□ -1.07
VPS11-201ENST00000524454 ATP6V1DQ9Y5K8 247 aa8.34□□□□□ -1.07
VPS11-201ENST00000524454 DOCK1Q14185 1865 aa8.34□□□□□ -1.07
VPS11-201ENST00000524454 MYH1P12882 1939 aa8.33□□□□□ -1.08
VPS11-201ENST00000524454 GPR75-ASB3A0A0A6YYF3 556 aa8.33□□□□□ -1.08
VPS11-201ENST00000524454 TCRBV5S4A2TA0A5A2 114 aa8.33□□□□□ -1.08
VPS11-201ENST00000524454 BRD1O95696 1058 aa8.33□□□□□ -1.08
VPS11-201ENST00000524454 TBC1D8O95759 1140 aa8.33□□□□□ -1.08
VPS11-201ENST00000524454 CYP21A2P08686 494 aa8.33□□□□□ -1.08
VPS11-201ENST00000524454 CYP7A1P22680 504 aa8.33□□□□□ -1.08
VPS11-201ENST00000524454 INPP5BP32019 993 aa8.33□□□□□ -1.08
VPS11-201ENST00000524454 EVCP57679 992 aa8.33□□□□□ -1.08
VPS11-201ENST00000524454 GSTO1P78417 241 aa8.33□□□□□ -1.08
VPS11-201ENST00000524454 NBR1Q14596 966 aa8.33□□□□□ -1.08
VPS11-201ENST00000524454 IMMTQ16891 758 aaKnown RBP8.33□□□□□ -1.08
VPS11-201ENST00000524454 SLFNL1Q499Z3 407 aa8.33□□□□□ -1.08
VPS11-201ENST00000524454 ZSCAN29Q8IWY8 852 aaPredicted RBP8.33□□□□□ -1.08
VPS11-201ENST00000524454 SLF2Q8IX21 1173 aa8.33□□□□□ -1.08
VPS11-201ENST00000524454 ANKRD13AQ8IZ07 590 aa8.33□□□□□ -1.08
VPS11-201ENST00000524454 MAGEB6Q8N7X4 407 aa8.33□□□□□ -1.08
VPS11-201ENST00000524454 MIGA1Q8NAN2 632 aa8.33□□□□□ -1.08
VPS11-201ENST00000524454 NAV1Q8NEY1 1877 aa8.33□□□□□ -1.08
VPS11-201ENST00000524454 DDX55Q8NHQ9 600 aaKnown RBP eCLIP8.33□□□□□ -1.08
VPS11-201ENST00000524454 OSBP2Q969R2 916 aa8.33□□□□□ -1.08
VPS11-201ENST00000524454 NEK1Q96PY6 1258 aa8.33□□□□□ -1.08
VPS11-201ENST00000524454 LLPHQ9BRT6 129 aaKnown RBP8.33□□□□□ -1.08
VPS11-201ENST00000524454 R3HDMLQ9H3Y0 253 aa8.33□□□□□ -1.08
VPS11-201ENST00000524454 FRMD4AQ9P2Q2 1039 aaPredicted RBP8.33□□□□□ -1.08
VPS11-201ENST00000524454 SNCAIPQ9Y6H5 919 aa8.33□□□□□ -1.08
VPS11-201ENST00000524454 PHIPQ8WWQ0 1821 aa8.33□□□□□ -1.08
VPS11-201ENST00000524454 ZSWIM8A7E2V4 1837 aa8.32□□□□□ -1.08
VPS11-201ENST00000524454 IGF2BP3O00425 579 aaKnown RBP eCLIP8.32□□□□□ -1.08
VPS11-201ENST00000524454 CHGBP05060 677 aa8.32□□□□□ -1.08
VPS11-201ENST00000524454 PCP11498 1178 aaKnown RBP8.32□□□□□ -1.08
VPS11-201ENST00000524454 PDE6AP16499 860 aa8.32□□□□□ -1.08
VPS11-201ENST00000524454 MLLT3P42568 568 aaPredicted RBP8.32□□□□□ -1.08
VPS11-201ENST00000524454 ADCK5Q3MIX3 580 aa8.32□□□□□ -1.08
VPS11-201ENST00000524454 SLC9C2Q5TAH2 1124 aa8.32□□□□□ -1.08
VPS11-201ENST00000524454 FKBP1CQ5VVH2 108 aa8.32□□□□□ -1.08
VPS11-201ENST00000524454 GIMAP6Q6P9H5 292 aa8.32□□□□□ -1.08
VPS11-201ENST00000524454 DHX32Q7L7V1 743 aaKnown RBP8.32□□□□□ -1.08
VPS11-201ENST00000524454 CCDC84Q86UT8 332 aaPredicted RBP8.32□□□□□ -1.08
VPS11-201ENST00000524454 MAPKAPK5Q8IW41 473 aa8.32□□□□□ -1.08
VPS11-201ENST00000524454 TEX11Q8IYF3 940 aa8.32□□□□□ -1.08
VPS11-201ENST00000524454 DDX12PQ92771 950 aa8.32□□□□□ -1.08
VPS11-201ENST00000524454 IDI2Q9BXS1 227 aa8.32□□□□□ -1.08
VPS11-201ENST00000524454 ZNF341Q9BYN7 854 aa8.32□□□□□ -1.08
VPS11-201ENST00000524454 PRDM10Q9NQV6 1147 aa8.32□□□□□ -1.08
VPS11-201ENST00000524454 SAP30BPQ9UHR5 308 aaKnown RBP8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms