RNA–Protein interactions for RNA: ENST00000524442.1

TTC39A-213, Transcript of tetratricopeptide repeat domain 39A, humanhuman

TSL 3

Gene TTC39A, Length 413 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39A-213ENST00000524442 RASA1P20936 1047 aa12.04□□□□□ -0.48
TTC39A-213ENST00000524442 CHMLP26374 656 aa12.04□□□□□ -0.48
TTC39A-213ENST00000524442 MTMR2Q13614 643 aa12.04□□□□□ -0.48
TTC39A-213ENST00000524442 SEPT2Q15019 361 aa12.04□□□□□ -0.48
TTC39A-213ENST00000524442 SHROOM1Q2M3G4 852 aaPredicted RBP12.04□□□□□ -0.48
TTC39A-213ENST00000524442 BMP2KLQ5H9B9 411 aa12.04□□□□□ -0.48
TTC39A-213ENST00000524442 USP17L2Q6R6M4 530 aa12.04□□□□□ -0.48
TTC39A-213ENST00000524442 ZNF444Q8N0Y2 327 aaPredicted RBP12.04□□□□□ -0.48
TTC39A-213ENST00000524442 ZNF296Q8WUU4 475 aaPredicted RBP12.04□□□□□ -0.48
TTC39A-213ENST00000524442 C12orf42Q96LP6 360 aa12.04□□□□□ -0.48
TTC39A-213ENST00000524442 FEZ1Q99689 392 aa12.04□□□□□ -0.48
TTC39A-213ENST00000524442 R3HDMLQ9H3Y0 253 aa12.04□□□□□ -0.48
TTC39A-213ENST00000524442 KANSL2Q9H9L4 492 aa12.04□□□□□ -0.48
TTC39A-213ENST00000524442 PHIPQ8WWQ0 1821 aa12.04□□□□□ -0.48
TTC39A-213ENST00000524442 ATAD5Q96QE3 1844 aa12.04□□□□□ -0.48
TTC39A-213ENST00000524442 PCP11498 1178 aaKnown RBP12.03□□□□□ -0.48
TTC39A-213ENST00000524442 OSBPP22059 807 aa12.03□□□□□ -0.48
TTC39A-213ENST00000524442 HOXA7P31268 230 aaPredicted RBP12.03□□□□□ -0.48
TTC39A-213ENST00000524442 NT5C2P49902 561 aa12.03□□□□□ -0.48
TTC39A-213ENST00000524442 SP3Q02447 781 aa12.03□□□□□ -0.48
TTC39A-213ENST00000524442 ICA1Q05084 483 aa12.03□□□□□ -0.48
TTC39A-213ENST00000524442 ARHGEF6Q15052 776 aa12.03□□□□□ -0.48
TTC39A-213ENST00000524442 PPP4R3BQ5MIZ7 849 aa12.03□□□□□ -0.48
TTC39A-213ENST00000524442 COL13A1Q5TAT6 717 aaPredicted RBP12.03□□□□□ -0.48
TTC39A-213ENST00000524442 ERO1AQ96HE7 468 aa12.03□□□□□ -0.48
TTC39A-213ENST00000524442 DSCC1Q9BVC3 393 aa12.03□□□□□ -0.48
TTC39A-213ENST00000524442 ARHGEF10LQ9HCE6 1279 aa12.03□□□□□ -0.48
TTC39A-213ENST00000524442 CTNNA3Q9UI47 895 aa12.03□□□□□ -0.48
TTC39A-213ENST00000524442 FGRP09769 529 aa12.02□□□□□ -0.49
TTC39A-213ENST00000524442 TREML2Q5T2D2 321 aa12.02□□□□□ -0.49
TTC39A-213ENST00000524442 C17orf99Q6UX52 265 aa12.02□□□□□ -0.49
TTC39A-213ENST00000524442 EMILIN3Q9NT22 766 aa12.02□□□□□ -0.49
TTC39A-213ENST00000524442 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.02□□□□□ -0.49
TTC39A-213ENST00000524442 TMX2Q9Y320 296 aa12.02□□□□□ -0.49
TTC39A-213ENST00000524442 ORC4O43929 436 aa12.01□□□□□ -0.49
TTC39A-213ENST00000524442 CYP2C8P10632 490 aa12.01□□□□□ -0.49
TTC39A-213ENST00000524442 GCLCP48506 637 aaPredicted RBP12.01□□□□□ -0.49
TTC39A-213ENST00000524442 PKN2Q16513 984 aaKnown RBP12.01□□□□□ -0.49
TTC39A-213ENST00000524442 CTU1Q7Z7A3 348 aaKnown RBP12.01□□□□□ -0.49
TTC39A-213ENST00000524442 NEDD1Q8NHV4 660 aa12.01□□□□□ -0.49
TTC39A-213ENST00000524442 ACER1Q8TDN7 264 aa12.01□□□□□ -0.49
TTC39A-213ENST00000524442 SMCR8Q8TEV9 937 aaPredicted RBP12.01□□□□□ -0.49
TTC39A-213ENST00000524442 LPAR1Q92633 364 aa12.01□□□□□ -0.49
TTC39A-213ENST00000524442 RNF41Q9H4P4 317 aaPredicted RBP12.01□□□□□ -0.49
TTC39A-213ENST00000524442 NYAP2Q9P242 653 aa12.01□□□□□ -0.49
TTC39A-213ENST00000524442 SYNPO2Q9UMS6 1093 aa12.01□□□□□ -0.49
TTC39A-213ENST00000524442 ADGRA2Q96PE1 1338 aa12.01□□□□□ -0.49
TTC39A-213ENST00000524442 PTPRFP10586 1907 aa12.01□□□□□ -0.49
TTC39A-213ENST00000524442 PLIN4Q96Q06 1357 aa12.01□□□□□ -0.49
TTC39A-213ENST00000524442 LOC285556D6RIA3 1793 aa12□□□□□ -0.49
TTC39A-213ENST00000524442 IGKV6D-41A0A0C4DH26 115 aa12□□□□□ -0.49
TTC39A-213ENST00000524442 A0A1W2PRG0 241 aa12□□□□□ -0.49
TTC39A-213ENST00000524442 USP17L15C9J2P7 530 aa12□□□□□ -0.49
TTC39A-213ENST00000524442 USP17L13C9JLJ4 530 aa12□□□□□ -0.49
TTC39A-213ENST00000524442 USP17L11C9JVI0 530 aa12□□□□□ -0.49
TTC39A-213ENST00000524442 USP17L18D6R9N7 530 aa12□□□□□ -0.49
TTC39A-213ENST00000524442 USP17L22D6RA61 530 aa12□□□□□ -0.49
TTC39A-213ENST00000524442 USP17L17D6RBQ6 530 aa12□□□□□ -0.49
TTC39A-213ENST00000524442 USP17L19D6RCP7 530 aa12□□□□□ -0.49
TTC39A-213ENST00000524442 USP17L20D6RJB6 530 aa12□□□□□ -0.49
TTC39A-213ENST00000524442 ZNF213O14771 459 aa12□□□□□ -0.49
TTC39A-213ENST00000524442 SGSM2O43147 1006 aa12□□□□□ -0.49
TTC39A-213ENST00000524442 PRDM1O75626 825 aa12□□□□□ -0.49
TTC39A-213ENST00000524442 TSPY3P0CV98 308 aa12□□□□□ -0.49
TTC39A-213ENST00000524442 TSPY8P0CW00 308 aa12□□□□□ -0.49
TTC39A-213ENST00000524442 BCRP11274 1271 aa12□□□□□ -0.49
TTC39A-213ENST00000524442 EEF2P13639 858 aaKnown RBP12□□□□□ -0.49
TTC39A-213ENST00000524442 IRX3P78415 501 aaPredicted RBP12□□□□□ -0.49
TTC39A-213ENST00000524442 CTDSPL2Q05D32 466 aa12□□□□□ -0.49
TTC39A-213ENST00000524442 USP17L24Q0WX57 530 aa12□□□□□ -0.49
TTC39A-213ENST00000524442 KIF22Q14807 665 aa12□□□□□ -0.49
TTC39A-213ENST00000524442 IMMTQ16891 758 aaKnown RBP12□□□□□ -0.49
TTC39A-213ENST00000524442 SIAH1Q8IUQ4 282 aa12□□□□□ -0.49
TTC39A-213ENST00000524442 STK11IPQ8N1F8 1099 aa12□□□□□ -0.49
TTC39A-213ENST00000524442 GTF3C2Q8WUA4 911 aaPredicted RBP12□□□□□ -0.49
TTC39A-213ENST00000524442 GNL3Q9BVP2 549 aaKnown RBP eCLIP12□□□□□ -0.49
TTC39A-213ENST00000524442 ASCC2Q9H1I8 757 aaPredicted RBP12□□□□□ -0.49
TTC39A-213ENST00000524442 VCPKMTQ9H867 229 aa12□□□□□ -0.49
TTC39A-213ENST00000524442 TSPY2A6NKD2 308 aa11.99□□□□□ -0.49
TTC39A-213ENST00000524442 GNRH1P01148 92 aa11.99□□□□□ -0.49
TTC39A-213ENST00000524442 VCAM1P19320 739 aa11.99□□□□□ -0.49
TTC39A-213ENST00000524442 LACTBP83111 547 aaPredicted RBP11.99□□□□□ -0.49
TTC39A-213ENST00000524442 TFAP4Q01664 338 aa11.99□□□□□ -0.49
TTC39A-213ENST00000524442 ZYXQ15942 572 aaKnown RBP11.99□□□□□ -0.49
TTC39A-213ENST00000524442 AKNAD1Q5T1N1 836 aa11.99□□□□□ -0.49
TTC39A-213ENST00000524442 CASC1Q6TDU7 716 aa11.99□□□□□ -0.49
TTC39A-213ENST00000524442 CATSPERGQ6ZRH7 1159 aa11.99□□□□□ -0.49
TTC39A-213ENST00000524442 MFSD6Q6ZSS7 791 aa11.99□□□□□ -0.49
TTC39A-213ENST00000524442 TNS4Q8IZW8 715 aa11.99□□□□□ -0.49
TTC39A-213ENST00000524442 STAG1Q8WVM7 1258 aa11.99□□□□□ -0.49
TTC39A-213ENST00000524442 MKL1Q969V6 931 aa11.99□□□□□ -0.49
TTC39A-213ENST00000524442 GOPCQ9HD26 462 aa11.99□□□□□ -0.49
TTC39A-213ENST00000524442 MTMR4Q9NYA4 1195 aa11.99□□□□□ -0.49
TTC39A-213ENST00000524442 CPA4Q9UI42 421 aa11.99□□□□□ -0.49
TTC39A-213ENST00000524442 MYH8P13535 1937 aa11.98□□□□□ -0.49
TTC39A-213ENST00000524442 WDR46O15213 610 aaKnown RBP11.98□□□□□ -0.49
TTC39A-213ENST00000524442 RANBP6O60518 1105 aaKnown RBP11.98□□□□□ -0.49
TTC39A-213ENST00000524442 TTLL1O95922 423 aa11.98□□□□□ -0.49
TTC39A-213ENST00000524442 ATP2B2Q01814 1243 aa11.98□□□□□ -0.49
TTC39A-213ENST00000524442 DGKZQ13574 1117 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms