RNA–Protein interactions for RNA: ENST00000524330.1

VPS13B-212, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 5

Gene VPS13B, Length 218 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-212ENST00000524330 PLCD1P51178 756 aa11.52□□□□□ -0.57
VPS13B-212ENST00000524330 KIF23Q02241 960 aaPredicted RBP11.52□□□□□ -0.57
VPS13B-212ENST00000524330 GRM4Q14833 912 aa11.52□□□□□ -0.57
VPS13B-212ENST00000524330 DLGAP5Q15398 846 aa11.52□□□□□ -0.57
VPS13B-212ENST00000524330 CFAP100Q494V2 611 aa11.52□□□□□ -0.57
VPS13B-212ENST00000524330 MYSM1Q5VVJ2 828 aa11.52□□□□□ -0.57
VPS13B-212ENST00000524330 APOBEC3HQ6NTF7 200 aaKnown RBP11.52□□□□□ -0.57
VPS13B-212ENST00000524330 CCDC148Q8NFR7 591 aa11.52□□□□□ -0.57
VPS13B-212ENST00000524330 POLR3EQ9NVU0 708 aa11.52□□□□□ -0.57
VPS13B-212ENST00000524330 TFIP11Q9UBB9 837 aaKnown RBP11.52□□□□□ -0.57
VPS13B-212ENST00000524330 PPP1R1BQ9UD71 204 aaPredicted RBP11.52□□□□□ -0.57
VPS13B-212ENST00000524330 PLIN4Q96Q06 1357 aa11.52□□□□□ -0.57
VPS13B-212ENST00000524330 SNED1Q8TER0 1413 aa11.52□□□□□ -0.57
VPS13B-212ENST00000524330 CDK5RAP2Q96SN8 1893 aa11.51□□□□□ -0.57
VPS13B-212ENST00000524330 CTAGE5O15320 804 aa11.51□□□□□ -0.57
VPS13B-212ENST00000524330 MMP1P03956 469 aa11.51□□□□□ -0.57
VPS13B-212ENST00000524330 PARP1P09874 1014 aaKnown RBP11.51□□□□□ -0.57
VPS13B-212ENST00000524330 KCNA3P22001 575 aa11.51□□□□□ -0.57
VPS13B-212ENST00000524330 RPS12P25398 132 aaKnown RBP11.51□□□□□ -0.57
VPS13B-212ENST00000524330 KRT2P35908 639 aa11.51□□□□□ -0.57
VPS13B-212ENST00000524330 ME1P48163 572 aa11.51□□□□□ -0.57
VPS13B-212ENST00000524330 R3HDM1Q15032 1099 aaKnown RBP11.51□□□□□ -0.57
VPS13B-212ENST00000524330 SLC4A8Q2Y0W8 1093 aa11.51□□□□□ -0.57
VPS13B-212ENST00000524330 RILPL1Q5EBL4 403 aa11.51□□□□□ -0.57
VPS13B-212ENST00000524330 CIAPIN1Q6FI81 312 aa11.51□□□□□ -0.57
VPS13B-212ENST00000524330 GALNT17Q6IS24 598 aa11.51□□□□□ -0.57
VPS13B-212ENST00000524330 MXD3Q9BW11 206 aa11.51□□□□□ -0.57
VPS13B-212ENST00000524330 PDGFDQ9GZP0 370 aaPredicted RBP11.51□□□□□ -0.57
VPS13B-212ENST00000524330 SH3GLB2Q9NR46 395 aa11.51□□□□□ -0.57
VPS13B-212ENST00000524330 COL2A1P02458 1487 aaPredicted RBP11.51□□□□□ -0.57
VPS13B-212ENST00000524330 TCHHQ07283 1943 aa11.5□□□□□ -0.57
VPS13B-212ENST00000524330 DDX60LQ5H9U9 1706 aaKnown RBP11.5□□□□□ -0.57
VPS13B-212ENST00000524330 GADD45BO75293 160 aaPredicted RBP11.5□□□□□ -0.57
VPS13B-212ENST00000524330 TTLL1O95922 423 aa11.5□□□□□ -0.57
VPS13B-212ENST00000524330 U2AF2P26368 475 aaKnown RBP eCLIP11.5□□□□□ -0.57
VPS13B-212ENST00000524330 TNNI2P48788 182 aa11.5□□□□□ -0.57
VPS13B-212ENST00000524330 EIF6P56537 245 aaKnown RBP11.5□□□□□ -0.57
VPS13B-212ENST00000524330 GABPAQ06546 454 aa11.5□□□□□ -0.57
VPS13B-212ENST00000524330 ASPRV1Q53RT3 343 aa11.5□□□□□ -0.57
VPS13B-212ENST00000524330 ANO1Q5XXA6 986 aa11.5□□□□□ -0.57
VPS13B-212ENST00000524330 LRSAM1Q6UWE0 723 aa11.5□□□□□ -0.57
VPS13B-212ENST00000524330 NBPF11Q86T75 865 aa11.5□□□□□ -0.57
VPS13B-212ENST00000524330 CCDC82Q8N4S0 544 aa11.5□□□□□ -0.57
VPS13B-212ENST00000524330 CCDC34Q96HJ3 373 aa11.5□□□□□ -0.57
VPS13B-212ENST00000524330 TMEM47Q9BQJ4 181 aa11.5□□□□□ -0.57
VPS13B-212ENST00000524330 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.5□□□□□ -0.57
VPS13B-212ENST00000524330 TSPY26PQ9H489 355 aa11.5□□□□□ -0.57
VPS13B-212ENST00000524330 CABP5Q9NP86 173 aa11.5□□□□□ -0.57
VPS13B-212ENST00000524330 ZNF277Q9NRM2 450 aaPredicted RBP11.5□□□□□ -0.57
VPS13B-212ENST00000524330 SEC63Q9UGP8 760 aaKnown RBP11.5□□□□□ -0.57
VPS13B-212ENST00000524330 V9GY48 417 aaPredicted RBP11.5□□□□□ -0.57
VPS13B-212ENST00000524330 LTBP3Q9NS15 1303 aa11.5□□□□□ -0.57
VPS13B-212ENST00000524330 MYH15Q9Y2K3 1946 aa11.5□□□□□ -0.57
VPS13B-212ENST00000524330 PSME4Q14997 1843 aa11.49□□□□□ -0.57
VPS13B-212ENST00000524330 ECM29Q5VYK3 1845 aa11.49□□□□□ -0.57
VPS13B-212ENST00000524330 A0A1W2PQ27 194 aa11.49□□□□□ -0.57
VPS13B-212ENST00000524330 A0A1W2PQ64 194 aa11.49□□□□□ -0.57
VPS13B-212ENST00000524330 A0A1W2PQD8 194 aa11.49□□□□□ -0.57
VPS13B-212ENST00000524330 FSD2A1L4K1 749 aa11.49□□□□□ -0.57
VPS13B-212ENST00000524330 hCG_1984214I3L0E3 225 aa11.49□□□□□ -0.57
VPS13B-212ENST00000524330 MPHOSPH10O00566 681 aaKnown RBP11.49□□□□□ -0.57
VPS13B-212ENST00000524330 SPTLC2O15270 562 aa11.49□□□□□ -0.57
VPS13B-212ENST00000524330 SCG2P13521 617 aa11.49□□□□□ -0.57
VPS13B-212ENST00000524330 NASPP49321 788 aaPredicted RBP11.49□□□□□ -0.57
VPS13B-212ENST00000524330 NLRP5P59047 1200 aa11.49□□□□□ -0.57
VPS13B-212ENST00000524330 FKBP1CQ5VVH2 108 aa11.49□□□□□ -0.57
VPS13B-212ENST00000524330 RCSD1Q6JBY9 416 aa11.49□□□□□ -0.57
VPS13B-212ENST00000524330 FAM173BQ6P4H8 233 aa11.49□□□□□ -0.57
VPS13B-212ENST00000524330 NOSTRINQ8IVI9 506 aa11.49□□□□□ -0.57
VPS13B-212ENST00000524330 DIS3L2Q8IYB7 885 aaKnown RBP11.49□□□□□ -0.57
VPS13B-212ENST00000524330 ZNF713Q8N859 430 aaPredicted RBP11.49□□□□□ -0.57
VPS13B-212ENST00000524330 MTMR14Q8NCE2 650 aa11.49□□□□□ -0.57
VPS13B-212ENST00000524330 NKX2-3Q8TAU0 364 aa11.49□□□□□ -0.57
VPS13B-212ENST00000524330 RRP36Q96EU6 259 aaKnown RBP11.49□□□□□ -0.57
VPS13B-212ENST00000524330 USP28Q96RU2 1077 aa11.49□□□□□ -0.57
VPS13B-212ENST00000524330 NUP62CLQ9H1M0 184 aa11.49□□□□□ -0.57
VPS13B-212ENST00000524330 GRPEL1Q9HAV7 217 aa11.49□□□□□ -0.57
VPS13B-212ENST00000524330 IL17RBQ9NRM6 502 aa11.49□□□□□ -0.57
VPS13B-212ENST00000524330 HERC5Q9UII4 1024 aaKnown RBP11.49□□□□□ -0.57
VPS13B-212ENST00000524330 MYH6P13533 1939 aa11.48□□□□□ -0.57
VPS13B-212ENST00000524330 MYH8P13535 1937 aa11.48□□□□□ -0.57
VPS13B-212ENST00000524330 YDJCA8MPS7 323 aa11.48□□□□□ -0.57
VPS13B-212ENST00000524330 PSMD14O00487 310 aa11.48□□□□□ -0.57
VPS13B-212ENST00000524330 NMT2O60551 498 aa11.48□□□□□ -0.57
VPS13B-212ENST00000524330 KINO60870 393 aaKnown RBP11.48□□□□□ -0.57
VPS13B-212ENST00000524330 DTNBO60941 627 aa11.48□□□□□ -0.57
VPS13B-212ENST00000524330 PPFIA3O75145 1194 aa11.48□□□□□ -0.57
VPS13B-212ENST00000524330 PPP6R2O75170 966 aa11.48□□□□□ -0.57
VPS13B-212ENST00000524330 RAD17O75943 681 aa11.48□□□□□ -0.57
VPS13B-212ENST00000524330 CEBPZQ03701 1054 aaKnown RBP11.48□□□□□ -0.57
VPS13B-212ENST00000524330 PFKFB3Q16875 520 aaPredicted RBP11.48□□□□□ -0.57
VPS13B-212ENST00000524330 CERKLQ49MI3 558 aaPredicted RBP11.48□□□□□ -0.57
VPS13B-212ENST00000524330 ADALQ6DHV7 355 aa11.48□□□□□ -0.57
VPS13B-212ENST00000524330 OTUD7BQ6GQQ9 843 aa11.48□□□□□ -0.57
VPS13B-212ENST00000524330 SLC44A5Q8NCS7 719 aa11.48□□□□□ -0.57
VPS13B-212ENST00000524330 MRPS27Q92552 414 aaKnown RBP11.48□□□□□ -0.57
VPS13B-212ENST00000524330 UPF1Q92900 1129 aaKnown RBP eCLIP11.48□□□□□ -0.57
VPS13B-212ENST00000524330 CHAMP1Q96JM3 812 aa11.48□□□□□ -0.57
VPS13B-212ENST00000524330 SPZ1Q9BXG8 430 aa11.48□□□□□ -0.57
VPS13B-212ENST00000524330 TNMDQ9H2S6 317 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms