RNA–Protein interactions for RNA: ENST00000523919.5

CSGALNACT1-214, Transcript of chondroitin sulfate N-acetylgalactosaminyltransferase 1, humanhuman

TSL 4

Gene CSGALNACT1, Length 577 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSGALNACT1-214ENST00000523919 APAF1O14727 1248 aa10.63□□□□□ -0.71
CSGALNACT1-214ENST00000523919 CNGA1P29973 690 aa10.63□□□□□ -0.71
CSGALNACT1-214ENST00000523919 PRDX5P30044 214 aa10.63□□□□□ -0.71
CSGALNACT1-214ENST00000523919 USP17L24Q0WX57 530 aa10.63□□□□□ -0.71
CSGALNACT1-214ENST00000523919 DIXDC1Q155Q3 683 aa10.63□□□□□ -0.71
CSGALNACT1-214ENST00000523919 TRIM60Q495X7 471 aa10.63□□□□□ -0.71
CSGALNACT1-214ENST00000523919 USP17L2Q6R6M4 530 aa10.63□□□□□ -0.71
CSGALNACT1-214ENST00000523919 G2E3Q7L622 706 aa10.63□□□□□ -0.71
CSGALNACT1-214ENST00000523919 IQSEC3Q9UPP2 1182 aaPredicted RBP10.63□□□□□ -0.71
CSGALNACT1-214ENST00000523919 TIMP1P01033 207 aa10.62□□□□□ -0.71
CSGALNACT1-214ENST00000523919 EPHA10Q5JZY3 1008 aa10.62□□□□□ -0.71
CSGALNACT1-214ENST00000523919 SH3BP5LQ7L8J4 393 aa10.62□□□□□ -0.71
CSGALNACT1-214ENST00000523919 TMEM199Q8N511 208 aa10.62□□□□□ -0.71
CSGALNACT1-214ENST00000523919 MSL3Q8N5Y2 521 aaKnown RBP10.62□□□□□ -0.71
CSGALNACT1-214ENST00000523919 SLC28A3Q9HAS3 691 aa10.62□□□□□ -0.71
CSGALNACT1-214ENST00000523919 XIRP2A4UGR9 3374 aa10.62□□□□□ -0.71
CSGALNACT1-214ENST00000523919 ELP1O95163 1332 aa10.61□□□□□ -0.71
CSGALNACT1-214ENST00000523919 TRIM43BA6NCK2 446 aa10.61□□□□□ -0.71
CSGALNACT1-214ENST00000523919 FAM86C2PA6NEL3 165 aa10.61□□□□□ -0.71
CSGALNACT1-214ENST00000523919 SMIM22K7EJ46 135 aa10.61□□□□□ -0.71
CSGALNACT1-214ENST00000523919 EYA2O00167 538 aa10.61□□□□□ -0.71
CSGALNACT1-214ENST00000523919 GTPBP6O43824 516 aaPredicted RBP10.61□□□□□ -0.71
CSGALNACT1-214ENST00000523919 RARBP10826 455 aa10.61□□□□□ -0.71
CSGALNACT1-214ENST00000523919 TLE2Q04725 743 aa10.61□□□□□ -0.71
CSGALNACT1-214ENST00000523919 MTMR2Q13614 643 aa10.61□□□□□ -0.71
CSGALNACT1-214ENST00000523919 LRRC41Q15345 812 aa10.61□□□□□ -0.71
CSGALNACT1-214ENST00000523919 MFSD5Q6N075 450 aa10.61□□□□□ -0.71
CSGALNACT1-214ENST00000523919 DPP9Q86TI2 863 aa10.61□□□□□ -0.71
CSGALNACT1-214ENST00000523919 SLC44A5Q8NCS7 719 aa10.61□□□□□ -0.71
CSGALNACT1-214ENST00000523919 TRIM43Q96BQ3 446 aaPredicted RBP10.61□□□□□ -0.71
CSGALNACT1-214ENST00000523919 NOL10Q9BSC4 688 aaKnown RBP10.61□□□□□ -0.71
CSGALNACT1-214ENST00000523919 PUS3Q9BZE2 481 aaKnown RBP10.61□□□□□ -0.71
CSGALNACT1-214ENST00000523919 PRDM12Q9H4Q4 367 aa10.61□□□□□ -0.71
CSGALNACT1-214ENST00000523919 MROH8Q9H579 483 aa10.61□□□□□ -0.71
CSGALNACT1-214ENST00000523919 TXNRD2Q9NNW7 524 aa10.61□□□□□ -0.71
CSGALNACT1-214ENST00000523919 C11orf16Q9NQ32 467 aa10.61□□□□□ -0.71
CSGALNACT1-214ENST00000523919 TMEM39AQ9NV64 488 aa10.61□□□□□ -0.71
CSGALNACT1-214ENST00000523919 DIS3Q9Y2L1 958 aaKnown RBP10.61□□□□□ -0.71
CSGALNACT1-214ENST00000523919 PI4K2BG5E9Z4 385 aa10.6□□□□□ -0.71
CSGALNACT1-214ENST00000523919 ALADP13716 330 aa10.6□□□□□ -0.71
CSGALNACT1-214ENST00000523919 IGFBP4P22692 258 aa10.6□□□□□ -0.71
CSGALNACT1-214ENST00000523919 COPB2P35606 906 aa10.6□□□□□ -0.71
CSGALNACT1-214ENST00000523919 NHLH1Q02575 133 aa10.6□□□□□ -0.71
CSGALNACT1-214ENST00000523919 CCL14Q16627 93 aa10.6□□□□□ -0.71
CSGALNACT1-214ENST00000523919 ZFPM1Q8IX07 1006 aa10.6□□□□□ -0.71
CSGALNACT1-214ENST00000523919 PRRX2Q99811 253 aa10.6□□□□□ -0.71
CSGALNACT1-214ENST00000523919 TRIM34Q9BYJ4 488 aa10.6□□□□□ -0.71
CSGALNACT1-214ENST00000523919 PORCNQ9H237 461 aa10.6□□□□□ -0.71
CSGALNACT1-214ENST00000523919 HOXC10Q9NYD6 342 aa10.6□□□□□ -0.71
CSGALNACT1-214ENST00000523919 CEP126Q9P2H0 1117 aa10.6□□□□□ -0.71
CSGALNACT1-214ENST00000523919 BAG3O95817 575 aa10.59□□□□□ -0.71
CSGALNACT1-214ENST00000523919 PFKMP08237 780 aa10.59□□□□□ -0.71
CSGALNACT1-214ENST00000523919 BTDP43251 543 aa10.59□□□□□ -0.71
CSGALNACT1-214ENST00000523919 RHBDL3P58872 404 aa10.59□□□□□ -0.71
CSGALNACT1-214ENST00000523919 LRRC24Q50LG9 513 aa10.59□□□□□ -0.71
CSGALNACT1-214ENST00000523919 GJC2Q5T442 439 aaPredicted RBP10.59□□□□□ -0.71
CSGALNACT1-214ENST00000523919 CCDC129Q6ZRS4 1044 aa10.59□□□□□ -0.71
CSGALNACT1-214ENST00000523919 ERICH6Q7L0X2 663 aa10.59□□□□□ -0.71
CSGALNACT1-214ENST00000523919 WDR63Q8IWG1 891 aa10.59□□□□□ -0.71
CSGALNACT1-214ENST00000523919 PBX4Q9BYU1 374 aa10.59□□□□□ -0.71
CSGALNACT1-214ENST00000523919 LMCD1Q9NZU5 365 aa10.59□□□□□ -0.71
CSGALNACT1-214ENST00000523919 PLXNA1Q9UIW2 1896 aa10.59□□□□□ -0.71
CSGALNACT1-214ENST00000523919 TLR3O15455 904 aaKnown RBP10.58□□□□□ -0.72
CSGALNACT1-214ENST00000523919 VAMP4O75379 141 aa10.58□□□□□ -0.72
CSGALNACT1-214ENST00000523919 IL15P40933 162 aaPredicted RBP10.58□□□□□ -0.72
CSGALNACT1-214ENST00000523919 ADCYAP1R1P41586 468 aa10.58□□□□□ -0.72
CSGALNACT1-214ENST00000523919 KCNQ1P51787 676 aa10.58□□□□□ -0.72
CSGALNACT1-214ENST00000523919 TFF2Q03403 129 aa10.58□□□□□ -0.72
CSGALNACT1-214ENST00000523919 PKN1Q16512 942 aa10.58□□□□□ -0.72
CSGALNACT1-214ENST00000523919 ATP2B3Q16720 1220 aa10.58□□□□□ -0.72
CSGALNACT1-214ENST00000523919 Q3C1V9 767 aa10.58□□□□□ -0.72
CSGALNACT1-214ENST00000523919 CATSPERGQ6ZRH7 1159 aa10.58□□□□□ -0.72
CSGALNACT1-214ENST00000523919 WWC1Q8IX03 1113 aa10.58□□□□□ -0.72
CSGALNACT1-214ENST00000523919 PCSK9Q8NBP7 692 aaKnown RBP10.58□□□□□ -0.72
CSGALNACT1-214ENST00000523919 KAZALD1Q96I82 304 aa10.58□□□□□ -0.72
CSGALNACT1-214ENST00000523919 KIAA1683Q9H0B3 1180 aa10.58□□□□□ -0.72
CSGALNACT1-214ENST00000523919 BICC1Q9H694 974 aaKnown RBP10.58□□□□□ -0.72
CSGALNACT1-214ENST00000523919 AKAP2Q9Y2D5 859 aa10.58□□□□□ -0.72
CSGALNACT1-214ENST00000523919 PCDHA11Q9Y5I1 949 aa10.58□□□□□ -0.72
CSGALNACT1-214ENST00000523919 TRANK1O15050 2925 aa10.58□□□□□ -0.72
CSGALNACT1-214ENST00000523919 SLC25A27O95847 323 aa10.57□□□□□ -0.72
CSGALNACT1-214ENST00000523919 HLA-DOAP06340 250 aa10.57□□□□□ -0.72
CSGALNACT1-214ENST00000523919 CST5P28325 142 aaPredicted RBP10.57□□□□□ -0.72
CSGALNACT1-214ENST00000523919 PICALMQ13492 652 aa10.57□□□□□ -0.72
CSGALNACT1-214ENST00000523919 ADGRE1Q14246 886 aa10.57□□□□□ -0.72
CSGALNACT1-214ENST00000523919 MVPQ14764 893 aaKnown RBP10.57□□□□□ -0.72
CSGALNACT1-214ENST00000523919 PUS10Q3MIT2 529 aaKnown RBP10.57□□□□□ -0.72
CSGALNACT1-214ENST00000523919 SUCLG2Q96I99 432 aa10.57□□□□□ -0.72
CSGALNACT1-214ENST00000523919 PAGR1Q9BTK6 254 aa10.57□□□□□ -0.72
CSGALNACT1-214ENST00000523919 TANGO6Q9C0B7 1094 aa10.57□□□□□ -0.72
CSGALNACT1-214ENST00000523919 XPNPEP3Q9NQH7 507 aa10.57□□□□□ -0.72
CSGALNACT1-214ENST00000523919 DDX4Q9NQI0 724 aaKnown RBP10.57□□□□□ -0.72
CSGALNACT1-214ENST00000523919 TBX21Q9UL17 535 aa10.57□□□□□ -0.72
CSGALNACT1-214ENST00000523919 LRRC37A2A6NM11 1700 aa10.57□□□□□ -0.72
CSGALNACT1-214ENST00000523919 PTPRCP08575 1304 aa10.57□□□□□ -0.72
CSGALNACT1-214ENST00000523919 AKR1A1P14550 325 aa10.56□□□□□ -0.72
CSGALNACT1-214ENST00000523919 TMEM240Q5SV17 173 aa10.56□□□□□ -0.72
CSGALNACT1-214ENST00000523919 RPUSD2Q8IZ73 545 aaKnown RBP10.56□□□□□ -0.72
CSGALNACT1-214ENST00000523919 CRACR2BQ8N4Y2 399 aaPredicted RBP10.56□□□□□ -0.72
CSGALNACT1-214ENST00000523919 GLT1D1Q96MS3 346 aa10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms