RNA–Protein interactions for RNA: ENST00000523541.1

CCNC-213, Transcript of cyclin C, humanhuman

TSL 1 (best)

Gene CCNC, Length 1,123 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNC-213ENST00000523541 OSBP2Q969R2 916 aa20.69■□□□□ 0.9
CCNC-213ENST00000523541 COA7Q96BR5 231 aa20.69■□□□□ 0.9
CCNC-213ENST00000523541 MORF4L1Q9UBU8 362 aa20.69■□□□□ 0.9
CCNC-213ENST00000523541 LOC285556D6RIA3 1793 aa20.69■□□□□ 0.9
CCNC-213ENST00000523541 EN2P19622 333 aaPredicted RBP20.68■□□□□ 0.9
CCNC-213ENST00000523541 CTR9Q6PD62 1173 aa20.68■□□□□ 0.9
CCNC-213ENST00000523541 C16orf86Q6ZW13 317 aa20.68■□□□□ 0.9
CCNC-213ENST00000523541 GSG1L2A8MUP6 293 aa20.67■□□□□ 0.9
CCNC-213ENST00000523541 USP17L15C9J2P7 530 aa20.67■□□□□ 0.9
CCNC-213ENST00000523541 PATL2C9JE40 543 aaKnown RBP20.67■□□□□ 0.9
CCNC-213ENST00000523541 USP17L13C9JLJ4 530 aa20.67■□□□□ 0.9
CCNC-213ENST00000523541 USP17L11C9JVI0 530 aa20.67■□□□□ 0.9
CCNC-213ENST00000523541 USP17L18D6R9N7 530 aa20.67■□□□□ 0.9
CCNC-213ENST00000523541 USP17L22D6RA61 530 aa20.67■□□□□ 0.9
CCNC-213ENST00000523541 USP17L17D6RBQ6 530 aa20.67■□□□□ 0.9
CCNC-213ENST00000523541 USP17L19D6RCP7 530 aa20.67■□□□□ 0.9
CCNC-213ENST00000523541 USP17L20D6RJB6 530 aa20.67■□□□□ 0.9
CCNC-213ENST00000523541 CHGBP05060 677 aa20.67■□□□□ 0.9
CCNC-213ENST00000523541 CDK8P49336 464 aa20.67■□□□□ 0.9
CCNC-213ENST00000523541 PDE1AP54750 535 aa20.67■□□□□ 0.9
CCNC-213ENST00000523541 UBXN2AP68543 259 aa20.67■□□□□ 0.9
CCNC-213ENST00000523541 USP17L24Q0WX57 530 aa20.67■□□□□ 0.9
CCNC-213ENST00000523541 OTUD7AQ8TE49 926 aaPredicted RBP20.67■□□□□ 0.9
CCNC-213ENST00000523541 EVI5LQ96CN4 794 aa20.67■□□□□ 0.9
CCNC-213ENST00000523541 P2RX7Q99572 595 aaKnown RBP20.67■□□□□ 0.9
CCNC-213ENST00000523541 DDX60LQ5H9U9 1706 aaKnown RBP20.67■□□□□ 0.9
CCNC-213ENST00000523541 TNRC18O15417 2968 aaPredicted RBP20.66■□□□□ 0.9
CCNC-213ENST00000523541 GPAA1O43292 621 aa20.66■□□□□ 0.9
CCNC-213ENST00000523541 CYP2D6P10635 497 aa20.66■□□□□ 0.9
CCNC-213ENST00000523541 GUCY1A2P33402 732 aa20.66■□□□□ 0.9
CCNC-213ENST00000523541 HERVK_113P62684 666 aa20.66■□□□□ 0.9
CCNC-213ENST00000523541 IRF5Q13568 498 aa20.66■□□□□ 0.9
CCNC-213ENST00000523541 CCAR1Q8IX12 1150 aaKnown RBP20.66■□□□□ 0.9
CCNC-213ENST00000523541 FSD1Q9BTV5 496 aa20.66■□□□□ 0.9
CCNC-213ENST00000523541 SH2D4AQ9H788 454 aa20.66■□□□□ 0.9
CCNC-213ENST00000523541 ZNF287Q9HBT7 754 aa20.66■□□□□ 0.9
CCNC-213ENST00000523541 GABRQQ9UN88 632 aa20.66■□□□□ 0.9
CCNC-213ENST00000523541 SUPT16HQ9Y5B9 1047 aaKnown RBP20.66■□□□□ 0.9
CCNC-213ENST00000523541 MGAMO43451 1857 aa20.66■□□□□ 0.9
CCNC-213ENST00000523541 CAPN2P17655 700 aa20.65■□□□□ 0.9
CCNC-213ENST00000523541 FLT3LGP49771 235 aa20.65■□□□□ 0.9
CCNC-213ENST00000523541 SEPT2Q15019 361 aa20.65■□□□□ 0.9
CCNC-213ENST00000523541 SLAIN1Q8ND83 568 aa20.65■□□□□ 0.9
CCNC-213ENST00000523541 GPRC5AQ8NFJ5 357 aa20.65■□□□□ 0.9
CCNC-213ENST00000523541 EXOC6Q8TAG9 804 aa20.65■□□□□ 0.9
CCNC-213ENST00000523541 PXYLP1Q8TE99 480 aa20.65■□□□□ 0.9
CCNC-213ENST00000523541 DYNLL2Q96FJ2 89 aa20.65■□□□□ 0.9
CCNC-213ENST00000523541 NACAP1Q9BZK3 213 aa20.65■□□□□ 0.9
CCNC-213ENST00000523541 CWC22Q9HCG8 908 aaKnown RBP20.65■□□□□ 0.9
CCNC-213ENST00000523541 ADCY3O60266 1144 aa20.64■□□□□ 0.89
CCNC-213ENST00000523541 ZMYM1Q5SVZ6 1142 aa20.64■□□□□ 0.89
CCNC-213ENST00000523541 LBX2Q6XYB7 198 aa20.64■□□□□ 0.89
CCNC-213ENST00000523541 CATSPERGQ6ZRH7 1159 aa20.64■□□□□ 0.89
CCNC-213ENST00000523541 LPAR1Q92633 364 aa20.64■□□□□ 0.89
CCNC-213ENST00000523541 KANSL2Q9H9L4 492 aa20.64■□□□□ 0.89
CCNC-213ENST00000523541 MYH7P12883 1935 aa20.64■□□□□ 0.89
CCNC-213ENST00000523541 NUCB1Q02818 461 aa20.63■□□□□ 0.89
CCNC-213ENST00000523541 MTFR1Q15390 333 aa20.63■□□□□ 0.89
CCNC-213ENST00000523541 ACER1Q8TDN7 264 aa20.63■□□□□ 0.89
CCNC-213ENST00000523541 PAGR1Q9BTK6 254 aa20.63■□□□□ 0.89
CCNC-213ENST00000523541 ARHGEF10LQ9HCE6 1279 aa20.63■□□□□ 0.89
CCNC-213ENST00000523541 HOXC10Q9NYD6 342 aa20.63■□□□□ 0.89
CCNC-213ENST00000523541 RABGAP1Q9Y3P9 1069 aa20.63■□□□□ 0.89
CCNC-213ENST00000523541 RBBP6Q7Z6E9 1792 aaKnown RBP20.63■□□□□ 0.89
CCNC-213ENST00000523541 APPP05067 770 aa20.62■□□□□ 0.89
CCNC-213ENST00000523541 ELNP15502 786 aa20.62■□□□□ 0.89
CCNC-213ENST00000523541 VCAM1P19320 739 aa20.62■□□□□ 0.89
CCNC-213ENST00000523541 EVX2Q03828 476 aa20.62■□□□□ 0.89
CCNC-213ENST00000523541 CHD1LQ86WJ1 897 aa20.62■□□□□ 0.89
CCNC-213ENST00000523541 SLC44A5Q8NCS7 719 aa20.62■□□□□ 0.89
CCNC-213ENST00000523541 RNF208Q9H0X6 261 aa20.62■□□□□ 0.89
CCNC-213ENST00000523541 OSBPL3Q9H4L5 887 aa20.62■□□□□ 0.89
CCNC-213ENST00000523541 RBPJLQ9UBG7 517 aa20.62■□□□□ 0.89
CCNC-213ENST00000523541 TMX2Q9Y320 296 aa20.62■□□□□ 0.89
CCNC-213ENST00000523541 CYP2D7A0A087X1C5 515 aa20.61■□□□□ 0.89
CCNC-213ENST00000523541 IGHDP01880 384 aa20.61■□□□□ 0.89
CCNC-213ENST00000523541 CCL5P13501 91 aa20.61■□□□□ 0.89
CCNC-213ENST00000523541 MAPK4P31152 587 aa20.61■□□□□ 0.89
CCNC-213ENST00000523541 PRPF38BQ5VTL8 546 aaKnown RBP20.61■□□□□ 0.89
CCNC-213ENST00000523541 IFNL3Q8IZI9 196 aa20.61■□□□□ 0.89
CCNC-213ENST00000523541 MKNK2Q9HBH9 465 aa20.61■□□□□ 0.89
CCNC-213ENST00000523541 HELLSQ9NRZ9 838 aa20.61■□□□□ 0.89
CCNC-213ENST00000523541 ROBO3Q96MS0 1386 aa20.6■□□□□ 0.89
CCNC-213ENST00000523541 A0A1W2PRG0 241 aa20.6■□□□□ 0.89
CCNC-213ENST00000523541 M0R2C6 588 aa20.6■□□□□ 0.89
CCNC-213ENST00000523541 SLC3A2P08195 630 aaKnown RBP20.6■□□□□ 0.89
CCNC-213ENST00000523541 AKR1B1P15121 316 aa20.6■□□□□ 0.89
CCNC-213ENST00000523541 TDO2P48775 406 aa20.6■□□□□ 0.89
CCNC-213ENST00000523541 CCNA1P78396 465 aa20.6■□□□□ 0.89
CCNC-213ENST00000523541 ICA1Q05084 483 aa20.6■□□□□ 0.89
CCNC-213ENST00000523541 SIAH1Q8IUQ4 282 aa20.6■□□□□ 0.89
CCNC-213ENST00000523541 NKX2-3Q8TAU0 364 aa20.6■□□□□ 0.89
CCNC-213ENST00000523541 LNPKQ9C0E8 428 aa20.6■□□□□ 0.89
CCNC-213ENST00000523541 KIAA0100Q14667 2235 aaKnown RBP20.59■□□□□ 0.89
CCNC-213ENST00000523541 PDE4DIPQ5VU43 2346 aa20.59■□□□□ 0.89
CCNC-213ENST00000523541 MINDY4BA8MYZ0 360 aa20.59■□□□□ 0.89
CCNC-213ENST00000523541 ERVK-9P63128 1117 aa20.59■□□□□ 0.89
CCNC-213ENST00000523541 ERVK-24P63145 666 aa20.59■□□□□ 0.89
CCNC-213ENST00000523541 COG2Q14746 738 aa20.59■□□□□ 0.89
CCNC-213ENST00000523541 RPAP3Q9H6T3 665 aaPredicted RBP20.59■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms