RNA–Protein interactions for RNA: ENST00000523328.5

PVT1-218, Transcript of Pvt1 oncogene, humanhuman

TSL 1 (best)

Gene PVT1, Length 343 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-218ENST00000523328 TLR7Q9NYK1 1049 aaKnown RBP27.79■■■□□ 2.04
PVT1-218ENST00000523328 STXBP5LQ9Y2K9 1186 aa27.79■■■□□ 2.04
PVT1-218ENST00000523328 USP17L15C9J2P7 530 aa27.78■■■□□ 2.04
PVT1-218ENST00000523328 USP17L13C9JLJ4 530 aa27.78■■■□□ 2.04
PVT1-218ENST00000523328 USP17L11C9JVI0 530 aa27.78■■■□□ 2.04
PVT1-218ENST00000523328 USP17L18D6R9N7 530 aa27.78■■■□□ 2.04
PVT1-218ENST00000523328 USP17L22D6RA61 530 aa27.78■■■□□ 2.04
PVT1-218ENST00000523328 USP17L17D6RBQ6 530 aa27.78■■■□□ 2.04
PVT1-218ENST00000523328 USP17L19D6RCP7 530 aa27.78■■■□□ 2.04
PVT1-218ENST00000523328 USP17L20D6RJB6 530 aa27.78■■■□□ 2.04
PVT1-218ENST00000523328 USP17L24Q0WX57 530 aa27.78■■■□□ 2.04
PVT1-218ENST00000523328 ZYXQ15942 572 aaKnown RBP27.78■■■□□ 2.04
PVT1-218ENST00000523328 FLRT1Q9NZU1 646 aa27.78■■■□□ 2.04
PVT1-218ENST00000523328 CATSPERGQ6ZRH7 1159 aa27.77■■■□□ 2.04
PVT1-218ENST00000523328 MIGA1Q8NAN2 632 aa27.77■■■□□ 2.04
PVT1-218ENST00000523328 EDC3Q96F86 508 aaKnown RBP27.77■■■□□ 2.04
PVT1-218ENST00000523328 FEZ1Q99689 392 aa27.77■■■□□ 2.04
PVT1-218ENST00000523328 EHD4Q9H223 541 aa27.77■■■□□ 2.04
PVT1-218ENST00000523328 NOP58Q9Y2X3 529 aaKnown RBP27.77■■■□□ 2.04
PVT1-218ENST00000523328 CCNA1P78396 465 aa27.76■■■□□ 2.03
PVT1-218ENST00000523328 KIAA1683Q9H0B3 1180 aa27.76■■■□□ 2.03
PVT1-218ENST00000523328 CWC22Q9HCG8 908 aaKnown RBP27.76■■■□□ 2.03
PVT1-218ENST00000523328 SERPINB13Q9UIV8 391 aa27.76■■■□□ 2.03
PVT1-218ENST00000523328 NDUFB9Q9Y6M9 179 aa27.76■■■□□ 2.03
PVT1-218ENST00000523328 IDH1O75874 414 aaKnown RBP27.75■■■□□ 2.03
PVT1-218ENST00000523328 USP5P45974 858 aa27.75■■■□□ 2.03
PVT1-218ENST00000523328 MDM2Q00987 491 aaPredicted RBP27.75■■■□□ 2.03
PVT1-218ENST00000523328 LBX2Q6XYB7 198 aa27.75■■■□□ 2.03
PVT1-218ENST00000523328 CERS3Q8IU89 383 aa27.75■■■□□ 2.03
PVT1-218ENST00000523328 EAF2Q96CJ1 260 aaPredicted RBP27.75■■■□□ 2.03
PVT1-218ENST00000523328 CCDC8Q9H0W5 538 aaPredicted RBP27.75■■■□□ 2.03
PVT1-218ENST00000523328 C1orf115Q9H7X2 142 aa27.75■■■□□ 2.03
PVT1-218ENST00000523328 SLC15A5A6NIM6 579 aa27.74■■■□□ 2.03
PVT1-218ENST00000523328 VCAM1P19320 739 aa27.74■■■□□ 2.03
PVT1-218ENST00000523328 PTPREP23469 700 aa27.74■■■□□ 2.03
PVT1-218ENST00000523328 USP14P54578 494 aa27.74■■■□□ 2.03
PVT1-218ENST00000523328 RAB3GAP1Q15042 981 aa27.74■■■□□ 2.03
PVT1-218ENST00000523328 ZKSCAN2Q63HK3 967 aa27.74■■■□□ 2.03
PVT1-218ENST00000523328 MAGEB6Q8N7X4 407 aa27.74■■■□□ 2.03
PVT1-218ENST00000523328 ACER1Q8TDN7 264 aa27.74■■■□□ 2.03
PVT1-218ENST00000523328 BTBD7Q9P203 1132 aa27.74■■■□□ 2.03
PVT1-218ENST00000523328 GLRX3O76003 335 aaKnown RBP27.73■■■□□ 2.03
PVT1-218ENST00000523328 HOXC6P09630 235 aa27.73■■■□□ 2.03
PVT1-218ENST00000523328 MFSD14CQ5VZR4 134 aa27.73■■■□□ 2.03
PVT1-218ENST00000523328 GRB14Q14449 540 aa27.72■■■□□ 2.03
PVT1-218ENST00000523328 ABCB5Q2M3G0 1257 aa27.72■■■□□ 2.03
PVT1-218ENST00000523328 CERKLQ49MI3 558 aaPredicted RBP27.72■■■□□ 2.03
PVT1-218ENST00000523328 WDR78Q5VTH9 848 aa27.72■■■□□ 2.03
PVT1-218ENST00000523328 ANTXR1Q9H6X2 564 aa27.72■■■□□ 2.03
PVT1-218ENST00000523328 DDX20Q9UHI6 824 aaKnown RBP27.72■■■□□ 2.03
PVT1-218ENST00000523328 LAMA2P24043 3122 aaKnown RBP27.72■■■□□ 2.03
PVT1-218ENST00000523328 SPDYE16A6NNV3 312 aaPredicted RBP27.71■■■□□ 2.03
PVT1-218ENST00000523328 SHMT1P34896 483 aa27.71■■■□□ 2.03
PVT1-218ENST00000523328 TTC6Q86TZ1 520 aa27.71■■■□□ 2.03
PVT1-218ENST00000523328 NPLOC4Q8TAT6 608 aa27.71■■■□□ 2.03
PVT1-218ENST00000523328 SENP6Q9GZR1 1112 aaPredicted RBP27.71■■■□□ 2.03
PVT1-218ENST00000523328 UNC80Q8N2C7 3258 aa27.7■■■□□ 2.03
PVT1-218ENST00000523328 CCER2I3L3R5 266 aa27.7■■■□□ 2.02
PVT1-218ENST00000523328 IGHA2P01877 340 aa27.7■■■□□ 2.02
PVT1-218ENST00000523328 GUCY1A2P33402 732 aa27.7■■■□□ 2.02
PVT1-218ENST00000523328 NAV1Q8NEY1 1877 aa27.7■■■□□ 2.02
PVT1-218ENST00000523328 RLFQ13129 1914 aa27.69■■■□□ 2.02
PVT1-218ENST00000523328 MSCO60682 206 aa27.69■■■□□ 2.02
PVT1-218ENST00000523328 PLCD1P51178 756 aa27.69■■■□□ 2.02
PVT1-218ENST00000523328 LPAR1Q92633 364 aa27.69■■■□□ 2.02
PVT1-218ENST00000523328 RPAP3Q9H6T3 665 aaPredicted RBP27.69■■■□□ 2.02
PVT1-218ENST00000523328 CABP5Q9NP86 173 aa27.69■■■□□ 2.02
PVT1-218ENST00000523328 IVNS1ABPQ9Y6Y0 642 aa27.69■■■□□ 2.02
PVT1-218ENST00000523328 LTBP2Q14767 1821 aa27.69■■■□□ 2.02
PVT1-218ENST00000523328 ZNF236Q9UL36 1845 aa27.69■■■□□ 2.02
PVT1-218ENST00000523328 CYP2C19P33261 490 aa27.68■■■□□ 2.02
PVT1-218ENST00000523328 ATP2B2Q01814 1243 aa27.68■■■□□ 2.02
PVT1-218ENST00000523328 TMED8Q6PL24 325 aaPredicted RBP27.68■■■□□ 2.02
PVT1-218ENST00000523328 TRPV1Q8NER1 839 aa27.68■■■□□ 2.02
PVT1-218ENST00000523328 RIOK1Q9BRS2 568 aaKnown RBP27.68■■■□□ 2.02
PVT1-218ENST00000523328 POTEB2H3BUK9 544 aa27.67■■■□□ 2.02
PVT1-218ENST00000523328 CNGA1P29973 690 aa27.67■■■□□ 2.02
PVT1-218ENST00000523328 MAP3K12Q12852 859 aa27.67■■■□□ 2.02
PVT1-218ENST00000523328 A0A0G2JMZ2 1700 aa27.67■■■□□ 2.02
PVT1-218ENST00000523328 DNM1LO00429 736 aa27.66■■■□□ 2.02
PVT1-218ENST00000523328 CYBAP13498 195 aa27.66■■■□□ 2.02
PVT1-218ENST00000523328 GABPAQ06546 454 aa27.66■■■□□ 2.02
PVT1-218ENST00000523328 ATN1P54259 1190 aaPredicted RBP27.65■■■□□ 2.02
PVT1-218ENST00000523328 SEPT2Q15019 361 aa27.65■■■□□ 2.02
PVT1-218ENST00000523328 FAM109BQ6ICB4 259 aaPredicted RBP27.65■■■□□ 2.02
PVT1-218ENST00000523328 RLBP1P12271 317 aa27.64■■■□□ 2.02
PVT1-218ENST00000523328 LBHD1Q9BQE6 289 aaPredicted RBP27.64■■■□□ 2.02
PVT1-218ENST00000523328 A0A1W2PRG0 241 aa27.63■■■□□ 2.01
PVT1-218ENST00000523328 EVX2Q03828 476 aa27.63■■■□□ 2.01
PVT1-218ENST00000523328 GUCD1Q96NT3 240 aa27.63■■■□□ 2.01
PVT1-218ENST00000523328 MOV10L1Q9BXT6 1211 aaKnown RBP27.63■■■□□ 2.01
PVT1-218ENST00000523328 POLR3DP05423 398 aaPredicted RBP27.62■■■□□ 2.01
PVT1-218ENST00000523328 RTP1P59025 263 aa27.62■■■□□ 2.01
PVT1-218ENST00000523328 OLFML2BQ68BL8 750 aa27.62■■■□□ 2.01
PVT1-218ENST00000523328 ITPRIPQ8IWB1 547 aa27.62■■■□□ 2.01
PVT1-218ENST00000523328 FTSJ3Q8IY81 847 aaKnown RBP27.62■■■□□ 2.01
PVT1-218ENST00000523328 ADORA2AP29274 412 aa27.61■■■□□ 2.01
PVT1-218ENST00000523328 COG2Q14746 738 aa27.61■■■□□ 2.01
PVT1-218ENST00000523328 CEP85Q6P2H3 762 aa27.61■■■□□ 2.01
PVT1-218ENST00000523328 AACSQ86V21 672 aa27.61■■■□□ 2.01
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms