RNA–Protein interactions for RNA: ENST00000523004.1

GM2A-202, Transcript of GM2 ganglioside activator, humanhuman

TSL 1 (best)

Gene GM2A, Length 643 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GM2A-202ENST00000523004 USP17L15C9J2P7 530 aa9.6□□□□□ -0.87
GM2A-202ENST00000523004 USP17L13C9JLJ4 530 aa9.6□□□□□ -0.87
GM2A-202ENST00000523004 USP17L11C9JVI0 530 aa9.6□□□□□ -0.87
GM2A-202ENST00000523004 USP17L18D6R9N7 530 aa9.6□□□□□ -0.87
GM2A-202ENST00000523004 USP17L22D6RA61 530 aa9.6□□□□□ -0.87
GM2A-202ENST00000523004 USP17L17D6RBQ6 530 aa9.6□□□□□ -0.87
GM2A-202ENST00000523004 USP17L19D6RCP7 530 aa9.6□□□□□ -0.87
GM2A-202ENST00000523004 USP17L20D6RJB6 530 aa9.6□□□□□ -0.87
GM2A-202ENST00000523004 CACNB2Q08289 660 aaPredicted RBP9.6□□□□□ -0.87
GM2A-202ENST00000523004 USP17L24Q0WX57 530 aa9.6□□□□□ -0.87
GM2A-202ENST00000523004 GPR142Q7Z601 462 aa9.6□□□□□ -0.87
GM2A-202ENST00000523004 PLEKHH3Q7Z736 793 aa9.6□□□□□ -0.87
GM2A-202ENST00000523004 C7orf61Q8IZ16 206 aa9.6□□□□□ -0.87
GM2A-202ENST00000523004 MAGEB6Q8N7X4 407 aa9.6□□□□□ -0.87
GM2A-202ENST00000523004 LRCH3Q96II8 777 aa9.6□□□□□ -0.87
GM2A-202ENST00000523004 PAGR1Q9BTK6 254 aa9.6□□□□□ -0.87
GM2A-202ENST00000523004 ANTXR1Q9H6X2 564 aa9.6□□□□□ -0.87
GM2A-202ENST00000523004 RABGAP1Q9Y3P9 1069 aa9.6□□□□□ -0.87
GM2A-202ENST00000523004 NDUFB9Q9Y6M9 179 aa9.6□□□□□ -0.87
GM2A-202ENST00000523004 PFASO15067 1338 aa9.59□□□□□ -0.87
GM2A-202ENST00000523004 CNMDO75829 334 aa9.59□□□□□ -0.87
GM2A-202ENST00000523004 COL6A1P12109 1028 aa9.59□□□□□ -0.87
GM2A-202ENST00000523004 ZKSCAN1P17029 563 aaPredicted RBP9.59□□□□□ -0.87
GM2A-202ENST00000523004 RGS2P41220 211 aa9.59□□□□□ -0.87
GM2A-202ENST00000523004 USP5P45974 858 aa9.59□□□□□ -0.87
GM2A-202ENST00000523004 USP14P54578 494 aa9.59□□□□□ -0.87
GM2A-202ENST00000523004 MAP3K12Q12852 859 aa9.59□□□□□ -0.87
GM2A-202ENST00000523004 MAP2K5Q13163 448 aa9.59□□□□□ -0.87
GM2A-202ENST00000523004 ZYXQ15942 572 aaKnown RBP9.59□□□□□ -0.87
GM2A-202ENST00000523004 CCL14Q16627 93 aa9.59□□□□□ -0.87
GM2A-202ENST00000523004 CERKLQ49MI3 558 aaPredicted RBP9.59□□□□□ -0.87
GM2A-202ENST00000523004 LHX8Q68G74 356 aa9.59□□□□□ -0.87
GM2A-202ENST00000523004 CEP85Q6P2H3 762 aa9.59□□□□□ -0.87
GM2A-202ENST00000523004 LBX2Q6XYB7 198 aa9.59□□□□□ -0.87
GM2A-202ENST00000523004 CATSPERGQ6ZRH7 1159 aa9.59□□□□□ -0.87
GM2A-202ENST00000523004 TTC6Q86TZ1 520 aa9.59□□□□□ -0.87
GM2A-202ENST00000523004 ERC1Q8IUD2 1116 aa9.59□□□□□ -0.87
GM2A-202ENST00000523004 CCAR1Q8IX12 1150 aaKnown RBP9.59□□□□□ -0.87
GM2A-202ENST00000523004 APBA2Q99767 749 aa9.59□□□□□ -0.87
GM2A-202ENST00000523004 RIOK1Q9BRS2 568 aaKnown RBP9.59□□□□□ -0.87
GM2A-202ENST00000523004 KIAA1683Q9H0B3 1180 aa9.59□□□□□ -0.87
GM2A-202ENST00000523004 ZMYND8Q9ULU4 1186 aaPredicted RBP9.59□□□□□ -0.87
GM2A-202ENST00000523004 SUPT16HQ9Y5B9 1047 aaKnown RBP9.59□□□□□ -0.87
GM2A-202ENST00000523004 LAMA2P24043 3122 aaKnown RBP9.58□□□□□ -0.88
GM2A-202ENST00000523004 SYN1P17600 705 aa9.58□□□□□ -0.88
GM2A-202ENST00000523004 VCAM1P19320 739 aa9.58□□□□□ -0.88
GM2A-202ENST00000523004 CCND3P30281 292 aaPredicted RBP9.58□□□□□ -0.88
GM2A-202ENST00000523004 SHMT1P34896 483 aa9.58□□□□□ -0.88
GM2A-202ENST00000523004 PLCD1P51178 756 aa9.58□□□□□ -0.88
GM2A-202ENST00000523004 CCNA1P78396 465 aa9.58□□□□□ -0.88
GM2A-202ENST00000523004 GABPAQ06546 454 aa9.58□□□□□ -0.88
GM2A-202ENST00000523004 RAB3GAP1Q15042 981 aa9.58□□□□□ -0.88
GM2A-202ENST00000523004 ABCB5Q2M3G0 1257 aa9.58□□□□□ -0.88
GM2A-202ENST00000523004 GPR153Q6NV75 609 aa9.58□□□□□ -0.88
GM2A-202ENST00000523004 AACSQ86V21 672 aa9.58□□□□□ -0.88
GM2A-202ENST00000523004 ACER1Q8TDN7 264 aa9.58□□□□□ -0.88
GM2A-202ENST00000523004 EDC3Q96F86 508 aaKnown RBP9.58□□□□□ -0.88
GM2A-202ENST00000523004 FEZ1Q99689 392 aa9.58□□□□□ -0.88
GM2A-202ENST00000523004 EXOC6BQ9Y2D4 811 aa9.58□□□□□ -0.88
GM2A-202ENST00000523004 FRMPD3Q5JV73 1810 aa9.58□□□□□ -0.88
GM2A-202ENST00000523004 SLC15A5A6NIM6 579 aa9.57□□□□□ -0.88
GM2A-202ENST00000523004 GLRX3O76003 335 aaKnown RBP9.57□□□□□ -0.88
GM2A-202ENST00000523004 HOXC6P09630 235 aa9.57□□□□□ -0.88
GM2A-202ENST00000523004 PTPREP23469 700 aa9.57□□□□□ -0.88
GM2A-202ENST00000523004 GUCY1A2P33402 732 aa9.57□□□□□ -0.88
GM2A-202ENST00000523004 MAGEA10P43363 369 aaPredicted RBP9.57□□□□□ -0.88
GM2A-202ENST00000523004 LRIT3Q3SXY7 679 aa9.57□□□□□ -0.88
GM2A-202ENST00000523004 HSP90AB4PQ58FF6 505 aa9.57□□□□□ -0.88
GM2A-202ENST00000523004 CABP5Q9NP86 173 aa9.57□□□□□ -0.88
GM2A-202ENST00000523004 FLRT1Q9NZU1 646 aa9.57□□□□□ -0.88
GM2A-202ENST00000523004 BTBD7Q9P203 1132 aa9.57□□□□□ -0.88
GM2A-202ENST00000523004 RLFQ13129 1914 aa9.56□□□□□ -0.88
GM2A-202ENST00000523004 NAV1Q8NEY1 1877 aa9.56□□□□□ -0.88
GM2A-202ENST00000523004 MAGEB6P1A0A0J9YX57 407 aa9.56□□□□□ -0.88
GM2A-202ENST00000523004 SPDYE16A6NNV3 312 aaPredicted RBP9.56□□□□□ -0.88
GM2A-202ENST00000523004 IGHA2P01877 340 aa9.56□□□□□ -0.88
GM2A-202ENST00000523004 POLR3DP05423 398 aaPredicted RBP9.56□□□□□ -0.88
GM2A-202ENST00000523004 PDE6AP16499 860 aa9.56□□□□□ -0.88
GM2A-202ENST00000523004 GRB14Q14449 540 aa9.56□□□□□ -0.88
GM2A-202ENST00000523004 SEPT2Q15019 361 aa9.56□□□□□ -0.88
GM2A-202ENST00000523004 TTF1Q15361 905 aaPredicted RBP9.56□□□□□ -0.88
GM2A-202ENST00000523004 LRRC26Q2I0M4 334 aa9.56□□□□□ -0.88
GM2A-202ENST00000523004 SLC9C2Q5TAH2 1124 aa9.56□□□□□ -0.88
GM2A-202ENST00000523004 MFSD14CQ5VZR4 134 aa9.56□□□□□ -0.88
GM2A-202ENST00000523004 TDHQ8IZJ6 230 aa9.56□□□□□ -0.88
GM2A-202ENST00000523004 RHPN1Q8TCX5 695 aa9.56□□□□□ -0.88
GM2A-202ENST00000523004 RPAP3Q9H6T3 665 aaPredicted RBP9.56□□□□□ -0.88
GM2A-202ENST00000523004 CWC22Q9HCG8 908 aaKnown RBP9.56□□□□□ -0.88
GM2A-202ENST00000523004 IL1RAPL2Q9NP60 686 aa9.56□□□□□ -0.88
GM2A-202ENST00000523004 CUL9Q8IWT3 2517 aa9.55□□□□□ -0.88
GM2A-202ENST00000523004 A0A1W2PRG0 241 aa9.55□□□□□ -0.88
GM2A-202ENST00000523004 TCRBV5S4A2TA0A5A2 114 aa9.55□□□□□ -0.88
GM2A-202ENST00000523004 ATP2B2Q01814 1243 aa9.55□□□□□ -0.88
GM2A-202ENST00000523004 EVX2Q03828 476 aa9.55□□□□□ -0.88
GM2A-202ENST00000523004 COG2Q14746 738 aa9.55□□□□□ -0.88
GM2A-202ENST00000523004 WDR78Q5VTH9 848 aa9.55□□□□□ -0.88
GM2A-202ENST00000523004 SLC17A8Q8NDX2 589 aa9.55□□□□□ -0.88
GM2A-202ENST00000523004 NPLOC4Q8TAT6 608 aa9.55□□□□□ -0.88
GM2A-202ENST00000523004 PANK1Q8TE04 598 aa9.55□□□□□ -0.88
GM2A-202ENST00000523004 PPIL4Q8WUA2 492 aaKnown RBP eCLIP9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms