RNA–Protein interactions for RNA: ENST00000522911.5

SDC2-207, Transcript of syndecan 2, humanhuman

TSL 3 BASIC

Gene SDC2, Length 677 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-207ENST00000522911 PPIL4Q8WUA2 492 aaKnown RBP eCLIP11.45□□□□□ -0.58
SDC2-207ENST00000522911 APBA2Q99767 749 aa11.45□□□□□ -0.58
SDC2-207ENST00000522911 RIOK1Q9BRS2 568 aaKnown RBP11.45□□□□□ -0.58
SDC2-207ENST00000522911 PORCNQ9H237 461 aa11.45□□□□□ -0.58
SDC2-207ENST00000522911 TLR7Q9NYK1 1049 aaKnown RBP11.45□□□□□ -0.58
SDC2-207ENST00000522911 DDX60LQ5H9U9 1706 aaKnown RBP11.44□□□□□ -0.58
SDC2-207ENST00000522911 IDH1O75874 414 aaKnown RBP11.44□□□□□ -0.58
SDC2-207ENST00000522911 GLRX3O76003 335 aaKnown RBP11.44□□□□□ -0.58
SDC2-207ENST00000522911 GDF11O95390 407 aa11.44□□□□□ -0.58
SDC2-207ENST00000522911 GH2P01242 217 aa11.44□□□□□ -0.58
SDC2-207ENST00000522911 RLBP1P12271 317 aa11.44□□□□□ -0.58
SDC2-207ENST00000522911 ZKSCAN1P17029 563 aaPredicted RBP11.44□□□□□ -0.58
SDC2-207ENST00000522911 DYNLL1P63167 89 aaKnown RBP11.44□□□□□ -0.58
SDC2-207ENST00000522911 CACNB2Q08289 660 aaPredicted RBP11.44□□□□□ -0.58
SDC2-207ENST00000522911 TTF1Q15361 905 aaPredicted RBP11.44□□□□□ -0.58
SDC2-207ENST00000522911 SHROOM1Q2M3G4 852 aaPredicted RBP11.44□□□□□ -0.58
SDC2-207ENST00000522911 Q3C1V9 767 aa11.44□□□□□ -0.58
SDC2-207ENST00000522911 CATSPERGQ6ZRH7 1159 aa11.44□□□□□ -0.58
SDC2-207ENST00000522911 C11orf49Q9H6J7 331 aa11.44□□□□□ -0.58
SDC2-207ENST00000522911 ALPK3Q96L96 1907 aa11.44□□□□□ -0.58
SDC2-207ENST00000522911 PFASO15067 1338 aa11.43□□□□□ -0.58
SDC2-207ENST00000522911 SLC15A5A6NIM6 579 aa11.43□□□□□ -0.58
SDC2-207ENST00000522911 MSCO60682 206 aa11.43□□□□□ -0.58
SDC2-207ENST00000522911 CNMDO75829 334 aa11.43□□□□□ -0.58
SDC2-207ENST00000522911 CYP2B6P20813 491 aa11.43□□□□□ -0.58
SDC2-207ENST00000522911 SHMT1P34896 483 aa11.43□□□□□ -0.58
SDC2-207ENST00000522911 MAP2K5Q13163 448 aa11.43□□□□□ -0.58
SDC2-207ENST00000522911 CERKLQ49MI3 558 aaPredicted RBP11.43□□□□□ -0.58
SDC2-207ENST00000522911 ITPRIPQ8IWB1 547 aa11.43□□□□□ -0.58
SDC2-207ENST00000522911 MAGEB6Q8N7X4 407 aa11.43□□□□□ -0.58
SDC2-207ENST00000522911 CCDC8Q9H0W5 538 aaPredicted RBP11.43□□□□□ -0.58
SDC2-207ENST00000522911 STAP2Q9UGK3 403 aa11.43□□□□□ -0.58
SDC2-207ENST00000522911 SAP30BPQ9UHR5 308 aaKnown RBP11.43□□□□□ -0.58
SDC2-207ENST00000522911 MYO5AQ9Y4I1 1855 aaKnown RBP11.42□□□□□ -0.58
SDC2-207ENST00000522911 VCAM1P19320 739 aa11.42□□□□□ -0.58
SDC2-207ENST00000522911 PTPREP23469 700 aa11.42□□□□□ -0.58
SDC2-207ENST00000522911 USP5P45974 858 aa11.42□□□□□ -0.58
SDC2-207ENST00000522911 GRB14Q14449 540 aa11.42□□□□□ -0.58
SDC2-207ENST00000522911 ABCB5Q2M3G0 1257 aa11.42□□□□□ -0.58
SDC2-207ENST00000522911 MIGA1Q8NAN2 632 aa11.42□□□□□ -0.58
SDC2-207ENST00000522911 EDC3Q96F86 508 aaKnown RBP11.42□□□□□ -0.58
SDC2-207ENST00000522911 ANTXR1Q9H6X2 564 aa11.42□□□□□ -0.58
SDC2-207ENST00000522911 CABP5Q9NP86 173 aa11.42□□□□□ -0.58
SDC2-207ENST00000522911 MYH1P12882 1939 aa11.41□□□□□ -0.58
SDC2-207ENST00000522911 SPDYE16A6NNV3 312 aaPredicted RBP11.41□□□□□ -0.58
SDC2-207ENST00000522911 SOX1O00570 391 aaPredicted RBP11.41□□□□□ -0.58
SDC2-207ENST00000522911 STRNO43815 780 aa11.41□□□□□ -0.58
SDC2-207ENST00000522911 MS4A1P11836 297 aa11.41□□□□□ -0.58
SDC2-207ENST00000522911 GUCY1A2P33402 732 aa11.41□□□□□ -0.58
SDC2-207ENST00000522911 PLCD1P51178 756 aa11.41□□□□□ -0.58
SDC2-207ENST00000522911 CCAR1Q8IX12 1150 aaKnown RBP11.41□□□□□ -0.58
SDC2-207ENST00000522911 RPAP2Q8IXW5 612 aaPredicted RBP11.41□□□□□ -0.58
SDC2-207ENST00000522911 C7orf61Q8IZ16 206 aa11.41□□□□□ -0.58
SDC2-207ENST00000522911 TDHQ8IZJ6 230 aa11.41□□□□□ -0.58
SDC2-207ENST00000522911 MB21D1Q8N884 522 aa11.41□□□□□ -0.58
SDC2-207ENST00000522911 SHCBP1Q8NEM2 672 aa11.41□□□□□ -0.58
SDC2-207ENST00000522911 PAGR1Q9BTK6 254 aa11.41□□□□□ -0.58
SDC2-207ENST00000522911 C1orf115Q9H7X2 142 aa11.41□□□□□ -0.58
SDC2-207ENST00000522911 ZNF236Q9UL36 1845 aa11.41□□□□□ -0.58
SDC2-207ENST00000522911 TCRBV5S4A2TA0A5A2 114 aa11.4□□□□□ -0.58
SDC2-207ENST00000522911 PEX10O60683 326 aa11.4□□□□□ -0.58
SDC2-207ENST00000522911 MAGEA10P43363 369 aaPredicted RBP11.4□□□□□ -0.58
SDC2-207ENST00000522911 CCL14Q16627 93 aa11.4□□□□□ -0.58
SDC2-207ENST00000522911 MFSD14CQ5VZR4 134 aa11.4□□□□□ -0.58
SDC2-207ENST00000522911 OLFML2BQ68BL8 750 aa11.4□□□□□ -0.58
SDC2-207ENST00000522911 AACSQ86V21 672 aa11.4□□□□□ -0.58
SDC2-207ENST00000522911 ABRAQ8N0Z2 381 aa11.4□□□□□ -0.58
SDC2-207ENST00000522911 RHPN1Q8TCX5 695 aa11.4□□□□□ -0.58
SDC2-207ENST00000522911 ACER1Q8TDN7 264 aa11.4□□□□□ -0.58
SDC2-207ENST00000522911 LPAR1Q92633 364 aa11.4□□□□□ -0.58
SDC2-207ENST00000522911 KIF1BPQ96EK5 621 aa11.4□□□□□ -0.58
SDC2-207ENST00000522911 FEZ1Q99689 392 aa11.4□□□□□ -0.58
SDC2-207ENST00000522911 CRNKL1Q9BZJ0 848 aaKnown RBP11.4□□□□□ -0.58
SDC2-207ENST00000522911 HOXC10Q9NYD6 342 aa11.4□□□□□ -0.58
SDC2-207ENST00000522911 SWAP70Q9UH65 585 aa11.4□□□□□ -0.58
SDC2-207ENST00000522911 UNC80Q8N2C7 3258 aa11.4□□□□□ -0.58
SDC2-207ENST00000522911 ZBED9Q6R2W3 1325 aa11.39□□□□□ -0.59
SDC2-207ENST00000522911 MAGEB6P1A0A0J9YX57 407 aa11.39□□□□□ -0.59
SDC2-207ENST00000522911 PDE6AP16499 860 aa11.39□□□□□ -0.59
SDC2-207ENST00000522911 CCND3P30281 292 aaPredicted RBP11.39□□□□□ -0.59
SDC2-207ENST00000522911 COG2Q14746 738 aa11.39□□□□□ -0.59
SDC2-207ENST00000522911 RAB3GAP1Q15042 981 aa11.39□□□□□ -0.59
SDC2-207ENST00000522911 SLC9C2Q5TAH2 1124 aa11.39□□□□□ -0.59
SDC2-207ENST00000522911 TMEM179Q6ZVK1 233 aa11.39□□□□□ -0.59
SDC2-207ENST00000522911 CLASRPQ8N2M8 674 aaKnown RBP11.39□□□□□ -0.59
SDC2-207ENST00000522911 LRCH3Q96II8 777 aa11.39□□□□□ -0.59
SDC2-207ENST00000522911 RPAP3Q9H6T3 665 aaPredicted RBP11.39□□□□□ -0.59
SDC2-207ENST00000522911 DCP1AQ9NPI6 582 aaPredicted RBP11.39□□□□□ -0.59
SDC2-207ENST00000522911 ATP8A2Q9NTI2 1148 aa11.39□□□□□ -0.59
SDC2-207ENST00000522911 BTBD7Q9P203 1132 aa11.39□□□□□ -0.59
SDC2-207ENST00000522911 EXOC6BQ9Y2D4 811 aa11.39□□□□□ -0.59
SDC2-207ENST00000522911 IVNS1ABPQ9Y6Y0 642 aa11.39□□□□□ -0.59
SDC2-207ENST00000522911 A0A0G2JMZ2 1700 aa11.38□□□□□ -0.59
SDC2-207ENST00000522911 DNM1LO00429 736 aa11.38□□□□□ -0.59
SDC2-207ENST00000522911 RAB11FIP3O75154 756 aa11.38□□□□□ -0.59
SDC2-207ENST00000522911 CYBAP13498 195 aa11.38□□□□□ -0.59
SDC2-207ENST00000522911 HNRNPUQ00839 825 aaKnown RBP eCLIP11.38□□□□□ -0.59
SDC2-207ENST00000522911 SEPT2Q15019 361 aa11.38□□□□□ -0.59
SDC2-207ENST00000522911 LRRC26Q2I0M4 334 aa11.38□□□□□ -0.59
SDC2-207ENST00000522911 FAM109BQ6ICB4 259 aaPredicted RBP11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms