RNA–Protein interactions for RNA: ENST00000522504.5

TRAPPC9-213, Transcript of trafficking protein particle complex 9, humanhuman

TSL 3

Gene TRAPPC9, Length 665 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-213ENST00000522504 Q7L0L9 218 aa18.66■□□□□ 0.58
TRAPPC9-213ENST00000522504 C12orf42Q96LP6 360 aa18.66■□□□□ 0.58
TRAPPC9-213ENST00000522504 FLRT1Q9NZU1 646 aa18.66■□□□□ 0.58
TRAPPC9-213ENST00000522504 EVX2Q03828 476 aa18.65■□□□□ 0.58
TRAPPC9-213ENST00000522504 TRMT44Q8IYL2 757 aaKnown RBP18.65■□□□□ 0.58
TRAPPC9-213ENST00000522504 APBA2Q99767 749 aa18.65■□□□□ 0.58
TRAPPC9-213ENST00000522504 RABGAP1Q9Y3P9 1069 aa18.65■□□□□ 0.58
TRAPPC9-213ENST00000522504 USP17L15C9J2P7 530 aa18.64■□□□□ 0.57
TRAPPC9-213ENST00000522504 USP17L13C9JLJ4 530 aa18.64■□□□□ 0.57
TRAPPC9-213ENST00000522504 USP17L11C9JVI0 530 aa18.64■□□□□ 0.57
TRAPPC9-213ENST00000522504 USP17L18D6R9N7 530 aa18.64■□□□□ 0.57
TRAPPC9-213ENST00000522504 USP17L22D6RA61 530 aa18.64■□□□□ 0.57
TRAPPC9-213ENST00000522504 USP17L17D6RBQ6 530 aa18.64■□□□□ 0.57
TRAPPC9-213ENST00000522504 USP17L19D6RCP7 530 aa18.64■□□□□ 0.57
TRAPPC9-213ENST00000522504 USP17L20D6RJB6 530 aa18.64■□□□□ 0.57
TRAPPC9-213ENST00000522504 IGSF3O75054 1194 aa18.64■□□□□ 0.57
TRAPPC9-213ENST00000522504 USP5P45974 858 aa18.64■□□□□ 0.57
TRAPPC9-213ENST00000522504 PLCD1P51178 756 aa18.64■□□□□ 0.57
TRAPPC9-213ENST00000522504 USP17L24Q0WX57 530 aa18.64■□□□□ 0.57
TRAPPC9-213ENST00000522504 RAB3GAP1Q15042 981 aa18.64■□□□□ 0.57
TRAPPC9-213ENST00000522504 CCAR1Q8IX12 1150 aaKnown RBP18.64■□□□□ 0.57
TRAPPC9-213ENST00000522504 DEFB123Q8N688 67 aa18.64■□□□□ 0.57
TRAPPC9-213ENST00000522504 GTF3C2Q8WUA4 911 aaPredicted RBP18.64■□□□□ 0.57
TRAPPC9-213ENST00000522504 BTBD7Q9P203 1132 aa18.64■□□□□ 0.57
TRAPPC9-213ENST00000522504 SERPINB13Q9UIV8 391 aa18.64■□□□□ 0.57
TRAPPC9-213ENST00000522504 DLL1O00548 723 aa18.63■□□□□ 0.57
TRAPPC9-213ENST00000522504 VCAM1P19320 739 aa18.63■□□□□ 0.57
TRAPPC9-213ENST00000522504 GUCY1A2P33402 732 aa18.63■□□□□ 0.57
TRAPPC9-213ENST00000522504 SHMT1P34896 483 aa18.63■□□□□ 0.57
TRAPPC9-213ENST00000522504 MAP2K5Q13163 448 aa18.63■□□□□ 0.57
TRAPPC9-213ENST00000522504 LRIT3Q3SXY7 679 aa18.63■□□□□ 0.57
TRAPPC9-213ENST00000522504 CATSPERGQ6ZRH7 1159 aa18.63■□□□□ 0.57
TRAPPC9-213ENST00000522504 TDHQ8IZJ6 230 aa18.63■□□□□ 0.57
TRAPPC9-213ENST00000522504 FEZ1Q99689 392 aa18.63■□□□□ 0.57
TRAPPC9-213ENST00000522504 RIOK1Q9BRS2 568 aaKnown RBP18.63■□□□□ 0.57
TRAPPC9-213ENST00000522504 KIAA1683Q9H0B3 1180 aa18.63■□□□□ 0.57
TRAPPC9-213ENST00000522504 EHD4Q9H223 541 aa18.63■□□□□ 0.57
TRAPPC9-213ENST00000522504 VCANP13611 3396 aa18.62■□□□□ 0.57
TRAPPC9-213ENST00000522504 ABCB5Q2M3G0 1257 aa18.62■□□□□ 0.57
TRAPPC9-213ENST00000522504 CERKLQ49MI3 558 aaPredicted RBP18.62■□□□□ 0.57
TRAPPC9-213ENST00000522504 ITPRIPQ8IWB1 547 aa18.62■□□□□ 0.57
TRAPPC9-213ENST00000522504 EDC3Q96F86 508 aaKnown RBP18.62■□□□□ 0.57
TRAPPC9-213ENST00000522504 UBE2OQ9C0C9 1292 aaKnown RBP18.62■□□□□ 0.57
TRAPPC9-213ENST00000522504 PTPREP23469 700 aa18.61■□□□□ 0.57
TRAPPC9-213ENST00000522504 GPR153Q6NV75 609 aa18.61■□□□□ 0.57
TRAPPC9-213ENST00000522504 CEP85Q6P2H3 762 aa18.61■□□□□ 0.57
TRAPPC9-213ENST00000522504 EXOC6BQ9Y2D4 811 aa18.61■□□□□ 0.57
TRAPPC9-213ENST00000522504 SPDYE16A6NNV3 312 aaPredicted RBP18.6■□□□□ 0.57
TRAPPC9-213ENST00000522504 IGHA2P01877 340 aa18.6■□□□□ 0.57
TRAPPC9-213ENST00000522504 USP14P54578 494 aa18.6■□□□□ 0.57
TRAPPC9-213ENST00000522504 MDM2Q00987 491 aaPredicted RBP18.6■□□□□ 0.57
TRAPPC9-213ENST00000522504 WDR78Q5VTH9 848 aa18.6■□□□□ 0.57
TRAPPC9-213ENST00000522504 LBX2Q6XYB7 198 aa18.6■□□□□ 0.57
TRAPPC9-213ENST00000522504 FTSJ3Q8IY81 847 aaKnown RBP18.6■□□□□ 0.57
TRAPPC9-213ENST00000522504 TRPV1Q8NER1 839 aa18.6■□□□□ 0.57
TRAPPC9-213ENST00000522504 NPLOC4Q8TAT6 608 aa18.6■□□□□ 0.57
TRAPPC9-213ENST00000522504 RPAP3Q9H6T3 665 aaPredicted RBP18.6■□□□□ 0.57
TRAPPC9-213ENST00000522504 MYH1P12882 1939 aa18.6■□□□□ 0.57
TRAPPC9-213ENST00000522504 PRUNE2Q8WUY3 3088 aa18.59■□□□□ 0.57
TRAPPC9-213ENST00000522504 A0A1W2PRG0 241 aa18.59■□□□□ 0.57
TRAPPC9-213ENST00000522504 SLC15A5A6NIM6 579 aa18.59■□□□□ 0.57
TRAPPC9-213ENST00000522504 CCNA1P78396 465 aa18.59■□□□□ 0.57
TRAPPC9-213ENST00000522504 GABPAQ06546 454 aa18.59■□□□□ 0.57
TRAPPC9-213ENST00000522504 MAP3K12Q12852 859 aa18.59■□□□□ 0.57
TRAPPC9-213ENST00000522504 GRB14Q14449 540 aa18.59■□□□□ 0.57
TRAPPC9-213ENST00000522504 SEPT2Q15019 361 aa18.59■□□□□ 0.57
TRAPPC9-213ENST00000522504 TTC6Q86TZ1 520 aa18.59■□□□□ 0.57
TRAPPC9-213ENST00000522504 AACSQ86V21 672 aa18.59■□□□□ 0.57
TRAPPC9-213ENST00000522504 CWC22Q9HCG8 908 aaKnown RBP18.59■□□□□ 0.57
TRAPPC9-213ENST00000522504 MTMR10Q9NXD2 777 aa18.59■□□□□ 0.57
TRAPPC9-213ENST00000522504 HOXC6P09630 235 aa18.58■□□□□ 0.56
TRAPPC9-213ENST00000522504 CYP2C19P33261 490 aa18.58■□□□□ 0.56
TRAPPC9-213ENST00000522504 KIAA1755Q5JYT7 1200 aa18.58■□□□□ 0.56
TRAPPC9-213ENST00000522504 MFSD14CQ5VZR4 134 aa18.58■□□□□ 0.56
TRAPPC9-213ENST00000522504 CERS3Q8IU89 383 aa18.58■□□□□ 0.56
TRAPPC9-213ENST00000522504 SENP6Q9GZR1 1112 aaPredicted RBP18.58■□□□□ 0.56
TRAPPC9-213ENST00000522504 CDH23Q9H251 3354 aa18.58■□□□□ 0.56
TRAPPC9-213ENST00000522504 GLRX3O76003 335 aaKnown RBP18.57■□□□□ 0.56
TRAPPC9-213ENST00000522504 IL1RAPL2Q9NP60 686 aa18.57■□□□□ 0.56
TRAPPC9-213ENST00000522504 DDX20Q9UHI6 824 aaKnown RBP18.57■□□□□ 0.56
TRAPPC9-213ENST00000522504 MAGEB6P1A0A0J9YX57 407 aa18.56■□□□□ 0.56
TRAPPC9-213ENST00000522504 POLR3DP05423 398 aaPredicted RBP18.56■□□□□ 0.56
TRAPPC9-213ENST00000522504 CYP2D6P10635 497 aa18.56■□□□□ 0.56
TRAPPC9-213ENST00000522504 PDE6AP16499 860 aa18.56■□□□□ 0.56
TRAPPC9-213ENST00000522504 ATN1P54259 1190 aaPredicted RBP18.56■□□□□ 0.56
TRAPPC9-213ENST00000522504 ATP2B2Q01814 1243 aa18.56■□□□□ 0.56
TRAPPC9-213ENST00000522504 SLC44A5Q8NCS7 719 aa18.56■□□□□ 0.56
TRAPPC9-213ENST00000522504 MOV10L1Q9BXT6 1211 aaKnown RBP18.56■□□□□ 0.56
TRAPPC9-213ENST00000522504 CABP5Q9NP86 173 aa18.56■□□□□ 0.56
TRAPPC9-213ENST00000522504 STXBP5LQ9Y2K9 1186 aa18.56■□□□□ 0.56
TRAPPC9-213ENST00000522504 TCRBV5S4A2TA0A5A2 114 aa18.55■□□□□ 0.56
TRAPPC9-213ENST00000522504 CNGA1P29973 690 aa18.55■□□□□ 0.56
TRAPPC9-213ENST00000522504 SLC9C2Q5TAH2 1124 aa18.55■□□□□ 0.56
TRAPPC9-213ENST00000522504 PANK1Q8TE04 598 aa18.55■□□□□ 0.56
TRAPPC9-213ENST00000522504 LPAR1Q92633 364 aa18.55■□□□□ 0.56
TRAPPC9-213ENST00000522504 IVNS1ABPQ9Y6Y0 642 aa18.55■□□□□ 0.56
TRAPPC9-213ENST00000522504 SMIM22K7EJ46 135 aa18.54■□□□□ 0.56
TRAPPC9-213ENST00000522504 CYBAP13498 195 aa18.54■□□□□ 0.56
TRAPPC9-213ENST00000522504 SLFNL1Q499Z3 407 aa18.54■□□□□ 0.56
TRAPPC9-213ENST00000522504 TMED8Q6PL24 325 aaPredicted RBP18.54■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms