RNA–Protein interactions for RNA: ENST00000522348.1

SPARC-205, Transcript of secreted protein acidic and cysteine rich, humanhuman

TSL 3

Gene SPARC, Length 497 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARC-205ENST00000522348 FUT2Q10981 343 aa11.22□□□□□ -0.61
SPARC-205ENST00000522348 ZSCAN23Q3MJ62 389 aa11.22□□□□□ -0.61
SPARC-205ENST00000522348 CFAP100Q494V2 611 aa11.22□□□□□ -0.61
SPARC-205ENST00000522348 TMTC3Q6ZXV5 915 aa11.22□□□□□ -0.61
SPARC-205ENST00000522348 CCDC82Q8N4S0 544 aa11.22□□□□□ -0.61
SPARC-205ENST00000522348 SLC44A5Q8NCS7 719 aa11.22□□□□□ -0.61
SPARC-205ENST00000522348 PNMA1Q8ND90 353 aa11.22□□□□□ -0.61
SPARC-205ENST00000522348 JDP2Q8WYK2 163 aa11.22□□□□□ -0.61
SPARC-205ENST00000522348 CCDC17Q96LX7 622 aa11.22□□□□□ -0.61
SPARC-205ENST00000522348 RTEL1Q9NZ71 1219 aa11.22□□□□□ -0.61
SPARC-205ENST00000522348 PI4KBQ9UBF8 816 aa11.22□□□□□ -0.61
SPARC-205ENST00000522348 MYH2Q9UKX2 1941 aa11.22□□□□□ -0.61
SPARC-205ENST00000522348 V9GY48 417 aaPredicted RBP11.22□□□□□ -0.61
SPARC-205ENST00000522348 FSD2A1L4K1 749 aa11.21□□□□□ -0.61
SPARC-205ENST00000522348 PSMD14O00487 310 aa11.21□□□□□ -0.61
SPARC-205ENST00000522348 SMARCA1P28370 1054 aa11.21□□□□□ -0.61
SPARC-205ENST00000522348 NOVP48745 357 aa11.21□□□□□ -0.61
SPARC-205ENST00000522348 GRM4Q14833 912 aa11.21□□□□□ -0.61
SPARC-205ENST00000522348 TNIP1Q15025 636 aa11.21□□□□□ -0.61
SPARC-205ENST00000522348 MYSM1Q5VVJ2 828 aa11.21□□□□□ -0.61
SPARC-205ENST00000522348 NLGN2Q8NFZ4 835 aa11.21□□□□□ -0.61
SPARC-205ENST00000522348 GMLQ99445 158 aa11.21□□□□□ -0.61
SPARC-205ENST00000522348 TMEM47Q9BQJ4 181 aa11.21□□□□□ -0.61
SPARC-205ENST00000522348 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.21□□□□□ -0.61
SPARC-205ENST00000522348 TAOK3Q9H2K8 898 aa11.21□□□□□ -0.61
SPARC-205ENST00000522348 FOXP1Q9H334 677 aaPredicted RBP11.21□□□□□ -0.61
SPARC-205ENST00000522348 STX8Q9UNK0 236 aa11.21□□□□□ -0.61
SPARC-205ENST00000522348 CHD4Q14839 1912 aa11.2□□□□□ -0.62
SPARC-205ENST00000522348 BAZ2AQ9UIF9 1905 aaKnown RBP11.2□□□□□ -0.62
SPARC-205ENST00000522348 RAD17O75943 681 aa11.2□□□□□ -0.62
SPARC-205ENST00000522348 MMP1P03956 469 aa11.2□□□□□ -0.62
SPARC-205ENST00000522348 MRE11P49959 708 aa11.2□□□□□ -0.62
SPARC-205ENST00000522348 DLGAP5Q15398 846 aa11.2□□□□□ -0.62
SPARC-205ENST00000522348 CCDC183Q5T5S1 534 aa11.2□□□□□ -0.62
SPARC-205ENST00000522348 FAM177A1Q8N128 213 aaPredicted RBP11.2□□□□□ -0.62
SPARC-205ENST00000522348 CMTR1Q8N1G2 835 aaKnown RBP11.2□□□□□ -0.62
SPARC-205ENST00000522348 SRBD1Q8N5C6 995 aaKnown RBP11.2□□□□□ -0.62
SPARC-205ENST00000522348 MTMR14Q8NCE2 650 aa11.2□□□□□ -0.62
SPARC-205ENST00000522348 PRMT6Q96LA8 375 aaPredicted RBP11.2□□□□□ -0.62
SPARC-205ENST00000522348 AIFM3Q96NN9 605 aa11.2□□□□□ -0.62
SPARC-205ENST00000522348 USP28Q96RU2 1077 aa11.2□□□□□ -0.62
SPARC-205ENST00000522348 TRIM34Q9BYJ4 488 aa11.2□□□□□ -0.62
SPARC-205ENST00000522348 GJB4Q9NTQ9 266 aa11.2□□□□□ -0.62
SPARC-205ENST00000522348 POLR3EQ9NVU0 708 aa11.2□□□□□ -0.62
SPARC-205ENST00000522348 TMOD2Q9NZR1 351 aa11.2□□□□□ -0.62
SPARC-205ENST00000522348 TMEM63CQ9P1W3 806 aa11.2□□□□□ -0.62
SPARC-205ENST00000522348 PALM3A6NDB9 673 aaPredicted RBP11.19□□□□□ -0.62
SPARC-205ENST00000522348 PLEKHA8P1O95397 391 aa11.19□□□□□ -0.62
SPARC-205ENST00000522348 YEATS4O95619 227 aa11.19□□□□□ -0.62
SPARC-205ENST00000522348 GUCY1A2P33402 732 aa11.19□□□□□ -0.62
SPARC-205ENST00000522348 NASPP49321 788 aaPredicted RBP11.19□□□□□ -0.62
SPARC-205ENST00000522348 CEBPZQ03701 1054 aaKnown RBP11.19□□□□□ -0.62
SPARC-205ENST00000522348 NFIAQ12857 509 aa11.19□□□□□ -0.62
SPARC-205ENST00000522348 STK38Q15208 465 aa11.19□□□□□ -0.62
SPARC-205ENST00000522348 SF3A1Q15459 793 aaKnown RBP11.19□□□□□ -0.62
SPARC-205ENST00000522348 PKN1Q16512 942 aa11.19□□□□□ -0.62
SPARC-205ENST00000522348 FKBP1CQ5VVH2 108 aa11.19□□□□□ -0.62
SPARC-205ENST00000522348 CIAPIN1Q6FI81 312 aa11.19□□□□□ -0.62
SPARC-205ENST00000522348 LRSAM1Q6UWE0 723 aa11.19□□□□□ -0.62
SPARC-205ENST00000522348 ZSCAN29Q8IWY8 852 aaPredicted RBP11.19□□□□□ -0.62
SPARC-205ENST00000522348 ZFPM1Q8IX07 1006 aa11.19□□□□□ -0.62
SPARC-205ENST00000522348 KCNG4Q8TDN1 519 aa11.19□□□□□ -0.62
SPARC-205ENST00000522348 TDRD3Q9H7E2 651 aaKnown RBP11.19□□□□□ -0.62
SPARC-205ENST00000522348 BRMS1Q9HCU9 246 aa11.19□□□□□ -0.62
SPARC-205ENST00000522348 SH3GLB2Q9NR46 395 aa11.19□□□□□ -0.62
SPARC-205ENST00000522348 MTMR4Q9NYA4 1195 aa11.19□□□□□ -0.62
SPARC-205ENST00000522348 FAM198AQ9UFP1 575 aa11.19□□□□□ -0.62
SPARC-205ENST00000522348 MAD2L2Q9UI95 211 aa11.19□□□□□ -0.62
SPARC-205ENST00000522348 LTBP3Q9NS15 1303 aa11.18□□□□□ -0.62
SPARC-205ENST00000522348 IGKV6D-41A0A0C4DH26 115 aa11.18□□□□□ -0.62
SPARC-205ENST00000522348 SPDYE2BA6NHP3 402 aa11.18□□□□□ -0.62
SPARC-205ENST00000522348 KIF28PB7ZC32 967 aa11.18□□□□□ -0.62
SPARC-205ENST00000522348 TTLL1O95922 423 aa11.18□□□□□ -0.62
SPARC-205ENST00000522348 PARP1P09874 1014 aaKnown RBP11.18□□□□□ -0.62
SPARC-205ENST00000522348 SPDYE6P0CI01 402 aa11.18□□□□□ -0.62
SPARC-205ENST00000522348 SHMT1P34896 483 aa11.18□□□□□ -0.62
SPARC-205ENST00000522348 CXCL9Q07325 125 aa11.18□□□□□ -0.62
SPARC-205ENST00000522348 TCP10Q12799 353 aa11.18□□□□□ -0.62
SPARC-205ENST00000522348 SLC39A14Q15043 492 aa11.18□□□□□ -0.62
SPARC-205ENST00000522348 RILPL1Q5EBL4 403 aa11.18□□□□□ -0.62
SPARC-205ENST00000522348 ANO1Q5XXA6 986 aa11.18□□□□□ -0.62
SPARC-205ENST00000522348 ADALQ6DHV7 355 aa11.18□□□□□ -0.62
SPARC-205ENST00000522348 METTL16Q86W50 562 aaKnown RBP11.18□□□□□ -0.62
SPARC-205ENST00000522348 NOSTRINQ8IVI9 506 aa11.18□□□□□ -0.62
SPARC-205ENST00000522348 DIS3L2Q8IYB7 885 aaKnown RBP11.18□□□□□ -0.62
SPARC-205ENST00000522348 JMYQ8N9B5 988 aa11.18□□□□□ -0.62
SPARC-205ENST00000522348 LINC00301Q8NCQ3 95 aa11.18□□□□□ -0.62
SPARC-205ENST00000522348 CEP95Q96GE4 821 aa11.18□□□□□ -0.62
SPARC-205ENST00000522348 PGBD1Q96JS3 809 aa11.18□□□□□ -0.62
SPARC-205ENST00000522348 BCS1LQ9Y276 419 aa11.18□□□□□ -0.62
SPARC-205ENST00000522348 LAMB1P07942 1786 aa11.18□□□□□ -0.62
SPARC-205ENST00000522348 DLEC1Q9Y238 1755 aa11.18□□□□□ -0.62
SPARC-205ENST00000522348 PLIN4Q96Q06 1357 aa11.17□□□□□ -0.62
SPARC-205ENST00000522348 KIF13BQ9NQT8 1826 aa11.17□□□□□ -0.62
SPARC-205ENST00000522348 DDTLA6NHG4 134 aaPredicted RBP11.17□□□□□ -0.62
SPARC-205ENST00000522348 BTBD18B2RXH4 712 aa11.17□□□□□ -0.62
SPARC-205ENST00000522348 KLRF2D3W0D1 207 aa11.17□□□□□ -0.62
SPARC-205ENST00000522348 SPTLC2O15270 562 aa11.17□□□□□ -0.62
SPARC-205ENST00000522348 MYO1BO43795 1136 aa11.17□□□□□ -0.62
SPARC-205ENST00000522348 SCG2P13521 617 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms