RNA–Protein interactions for RNA: ENST00000521944.1

TRAPPC9-212, Transcript of trafficking protein particle complex 9, humanhuman

TSL 3

Gene TRAPPC9, Length 492 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-212ENST00000521944 RRP1BQ14684 758 aaKnown RBP11.24□□□□□ -0.61
TRAPPC9-212ENST00000521944 SNX17Q15036 470 aa11.24□□□□□ -0.61
TRAPPC9-212ENST00000521944 AKNAD1Q5T1N1 836 aa11.24□□□□□ -0.61
TRAPPC9-212ENST00000521944 SLC39A5Q6ZMH5 540 aa11.24□□□□□ -0.61
TRAPPC9-212ENST00000521944 VPS37DQ86XT2 251 aa11.24□□□□□ -0.61
TRAPPC9-212ENST00000521944 PORCNQ9H237 461 aa11.24□□□□□ -0.61
TRAPPC9-212ENST00000521944 C11orf16Q9NQ32 467 aa11.24□□□□□ -0.61
TRAPPC9-212ENST00000521944 PRKAG2Q9UGJ0 569 aa11.24□□□□□ -0.61
TRAPPC9-212ENST00000521944 ATP11BQ9Y2G3 1177 aa11.24□□□□□ -0.61
TRAPPC9-212ENST00000521944 MAST3O60307 1309 aa11.24□□□□□ -0.61
TRAPPC9-212ENST00000521944 RFX7Q2KHR2 1363 aa11.24□□□□□ -0.61
TRAPPC9-212ENST00000521944 TRIM60Q495X7 471 aa11.23□□□□□ -0.61
TRAPPC9-212ENST00000521944 LRRC24Q50LG9 513 aa11.23□□□□□ -0.61
TRAPPC9-212ENST00000521944 TAF7LQ5H9L4 462 aa11.23□□□□□ -0.61
TRAPPC9-212ENST00000521944 BEND3Q5T5X7 828 aa11.23□□□□□ -0.61
TRAPPC9-212ENST00000521944 SPNS2Q8IVW8 549 aa11.23□□□□□ -0.61
TRAPPC9-212ENST00000521944 TRPV1Q8NER1 839 aa11.23□□□□□ -0.61
TRAPPC9-212ENST00000521944 SOCS4Q8WXH5 440 aa11.23□□□□□ -0.61
TRAPPC9-212ENST00000521944 LPAR1Q92633 364 aa11.23□□□□□ -0.61
TRAPPC9-212ENST00000521944 P2RX7Q99572 595 aaKnown RBP11.23□□□□□ -0.61
TRAPPC9-212ENST00000521944 ZBED2Q9BTP6 218 aa11.23□□□□□ -0.61
TRAPPC9-212ENST00000521944 IDI2Q9BXS1 227 aa11.23□□□□□ -0.61
TRAPPC9-212ENST00000521944 DDX4Q9NQI0 724 aaKnown RBP11.23□□□□□ -0.61
TRAPPC9-212ENST00000521944 RBPJLQ9UBG7 517 aa11.23□□□□□ -0.61
TRAPPC9-212ENST00000521944 LOC285556D6RIA3 1793 aa11.23□□□□□ -0.61
TRAPPC9-212ENST00000521944 DOCK1Q14185 1865 aa11.23□□□□□ -0.61
TRAPPC9-212ENST00000521944 DNM1LO00429 736 aa11.22□□□□□ -0.61
TRAPPC9-212ENST00000521944 FRAT2O75474 233 aaPredicted RBP11.22□□□□□ -0.61
TRAPPC9-212ENST00000521944 PRDX5P30044 214 aa11.22□□□□□ -0.61
TRAPPC9-212ENST00000521944 CCDC85BQ15834 202 aaPredicted RBP11.22□□□□□ -0.61
TRAPPC9-212ENST00000521944 TSR1Q2NL82 804 aaKnown RBP11.22□□□□□ -0.61
TRAPPC9-212ENST00000521944 TRMT44Q8IYL2 757 aaKnown RBP11.22□□□□□ -0.61
TRAPPC9-212ENST00000521944 RNPC3Q96LT9 517 aaKnown RBP11.22□□□□□ -0.61
TRAPPC9-212ENST00000521944 PRDM5Q9NQX1 630 aaPredicted RBP11.22□□□□□ -0.61
TRAPPC9-212ENST00000521944 DDX20Q9UHI6 824 aaKnown RBP11.22□□□□□ -0.61
TRAPPC9-212ENST00000521944 VPS9D1Q9Y2B5 631 aa11.22□□□□□ -0.61
TRAPPC9-212ENST00000521944 LRRFIP2Q9Y608 721 aaKnown RBP11.22□□□□□ -0.61
TRAPPC9-212ENST00000521944 MROH5Q6ZUA9 1318 aa11.21□□□□□ -0.61
TRAPPC9-212ENST00000521944 FAM196BA6NMK8 535 aa11.21□□□□□ -0.61
TRAPPC9-212ENST00000521944 F6X3S4 739 aa11.21□□□□□ -0.61
TRAPPC9-212ENST00000521944 ENTPD3O75355 529 aa11.21□□□□□ -0.61
TRAPPC9-212ENST00000521944 FGFR2P21802 821 aa11.21□□□□□ -0.61
TRAPPC9-212ENST00000521944 CAVIN4Q5BKX8 364 aa11.21□□□□□ -0.61
TRAPPC9-212ENST00000521944 SH3D19Q5HYK7 790 aa11.21□□□□□ -0.61
TRAPPC9-212ENST00000521944 GJC2Q5T442 439 aaPredicted RBP11.21□□□□□ -0.61
TRAPPC9-212ENST00000521944 GPR142Q7Z601 462 aa11.21□□□□□ -0.61
TRAPPC9-212ENST00000521944 ZNF280CQ8ND82 737 aa11.21□□□□□ -0.61
TRAPPC9-212ENST00000521944 GPRC5AQ8NFJ5 357 aa11.21□□□□□ -0.61
TRAPPC9-212ENST00000521944 TSR2Q969E8 191 aaKnown RBP11.21□□□□□ -0.61
TRAPPC9-212ENST00000521944 STK31Q9BXU1 1019 aa11.21□□□□□ -0.61
TRAPPC9-212ENST00000521944 PRDM12Q9H4Q4 367 aa11.21□□□□□ -0.61
TRAPPC9-212ENST00000521944 HCN4Q9Y3Q4 1203 aa11.21□□□□□ -0.61
TRAPPC9-212ENST00000521944 TRANK1O15050 2925 aa11.21□□□□□ -0.62
TRAPPC9-212ENST00000521944 DOCK2Q92608 1830 aa11.21□□□□□ -0.62
TRAPPC9-212ENST00000521944 HSFX4A0A1B0GTS1 333 aaPredicted RBP11.2□□□□□ -0.62
TRAPPC9-212ENST00000521944 HSFX3A0A1B0GWH4 333 aaPredicted RBP11.2□□□□□ -0.62
TRAPPC9-212ENST00000521944 APAF1O14727 1248 aa11.2□□□□□ -0.62
TRAPPC9-212ENST00000521944 PDE8BO95263 885 aa11.2□□□□□ -0.62
TRAPPC9-212ENST00000521944 RGS2P41220 211 aa11.2□□□□□ -0.62
TRAPPC9-212ENST00000521944 TFF2Q03403 129 aa11.2□□□□□ -0.62
TRAPPC9-212ENST00000521944 FKBP5Q13451 457 aaPredicted RBP11.2□□□□□ -0.62
TRAPPC9-212ENST00000521944 TIFAQ96CG3 184 aa11.2□□□□□ -0.62
TRAPPC9-212ENST00000521944 APBA2Q99767 749 aa11.2□□□□□ -0.62
TRAPPC9-212ENST00000521944 CHMP4AQ9BY43 222 aa11.2□□□□□ -0.62
TRAPPC9-212ENST00000521944 GRXCR1A8MXD5 290 aa11.19□□□□□ -0.62
TRAPPC9-212ENST00000521944 GRM8O00222 908 aa11.19□□□□□ -0.62
TRAPPC9-212ENST00000521944 MAPK4P31152 587 aa11.19□□□□□ -0.62
TRAPPC9-212ENST00000521944 HOXA7P31268 230 aaPredicted RBP11.19□□□□□ -0.62
TRAPPC9-212ENST00000521944 HERVK_113P62684 666 aa11.19□□□□□ -0.62
TRAPPC9-212ENST00000521944 JAG1P78504 1218 aa11.19□□□□□ -0.62
TRAPPC9-212ENST00000521944 TLE2Q04725 743 aa11.19□□□□□ -0.62
TRAPPC9-212ENST00000521944 WDR66Q8TBY9 1149 aa11.19□□□□□ -0.62
TRAPPC9-212ENST00000521944 PRRC2BQ5JSZ5 2229 aaKnown RBP11.19□□□□□ -0.62
TRAPPC9-212ENST00000521944 UTYO14607 1347 aa11.18□□□□□ -0.62
TRAPPC9-212ENST00000521944 CYP2C19P33261 490 aa11.18□□□□□ -0.62
TRAPPC9-212ENST00000521944 KCNQ1P51787 676 aa11.18□□□□□ -0.62
TRAPPC9-212ENST00000521944 ERVK-9P63128 1117 aa11.18□□□□□ -0.62
TRAPPC9-212ENST00000521944 ERVK-24P63145 666 aa11.18□□□□□ -0.62
TRAPPC9-212ENST00000521944 MAP2K5Q13163 448 aa11.18□□□□□ -0.62
TRAPPC9-212ENST00000521944 C1orf53Q5VUE5 145 aa11.18□□□□□ -0.62
TRAPPC9-212ENST00000521944 C16orf59Q7L2K0 433 aa11.18□□□□□ -0.62
TRAPPC9-212ENST00000521944 PLEKHH3Q7Z736 793 aa11.18□□□□□ -0.62
TRAPPC9-212ENST00000521944 CCER1Q8TC90 406 aaPredicted RBP11.18□□□□□ -0.62
TRAPPC9-212ENST00000521944 SUCLG2Q96I99 432 aa11.18□□□□□ -0.62
TRAPPC9-212ENST00000521944 PBX4Q9BYU1 374 aa11.18□□□□□ -0.62
TRAPPC9-212ENST00000521944 CXXC1Q9P0U4 656 aaPredicted RBP11.18□□□□□ -0.62
TRAPPC9-212ENST00000521944 RABGEF1Q9UJ41 708 aa11.18□□□□□ -0.62
TRAPPC9-212ENST00000521944 NDUFB9Q9Y6M9 179 aa11.18□□□□□ -0.62
TRAPPC9-212ENST00000521944 BRWD1Q9NSI6 2320 aa11.18□□□□□ -0.62
TRAPPC9-212ENST00000521944 GAKO14976 1311 aa11.17□□□□□ -0.62
TRAPPC9-212ENST00000521944 KIF16BQ96L93 1317 aa11.17□□□□□ -0.62
TRAPPC9-212ENST00000521944 KIAA0355O15063 1070 aa11.17□□□□□ -0.62
TRAPPC9-212ENST00000521944 CNMDO75829 334 aa11.17□□□□□ -0.62
TRAPPC9-212ENST00000521944 ADCYAP1R1P41586 468 aa11.17□□□□□ -0.62
TRAPPC9-212ENST00000521944 PABPC4Q13310 644 aaKnown RBP eCLIP11.17□□□□□ -0.62
TRAPPC9-212ENST00000521944 TWISTNBQ3B726 338 aaPredicted RBP11.17□□□□□ -0.62
TRAPPC9-212ENST00000521944 METTL24Q5JXM2 366 aa11.17□□□□□ -0.62
TRAPPC9-212ENST00000521944 TMEM31Q5JXX7 168 aa11.17□□□□□ -0.62
TRAPPC9-212ENST00000521944 ANO1Q5XXA6 986 aa11.17□□□□□ -0.62
TRAPPC9-212ENST00000521944 ZSCAN29Q8IWY8 852 aaPredicted RBP11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms