RNA–Protein interactions for RNA: ENST00000521724.5

CTNNA1-230, Transcript of catenin alpha 1, humanhuman

TSL 2

Gene CTNNA1, Length 2,741 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-230ENST00000521724 TARSL2A2RTX5 802 aaKnown RBP10.83□□□□□ -0.68
CTNNA1-230ENST00000521724 TESPA1A2RU30 521 aaPredicted RBP10.83□□□□□ -0.68
CTNNA1-230ENST00000521724 ERCC5P28715 1186 aaPredicted RBP10.83□□□□□ -0.68
CTNNA1-230ENST00000521724 ARHGAP25P42331 645 aa10.83□□□□□ -0.68
CTNNA1-230ENST00000521724 SATB1Q01826 763 aa10.83□□□□□ -0.68
CTNNA1-230ENST00000521724 DDR1Q08345 913 aa10.83□□□□□ -0.68
CTNNA1-230ENST00000521724 CPLX2Q6PUV4 134 aaKnown RBP10.83□□□□□ -0.68
CTNNA1-230ENST00000521724 TRAPPC11Q7Z392 1133 aa10.83□□□□□ -0.68
CTNNA1-230ENST00000521724 LRP10Q7Z4F1 713 aa10.83□□□□□ -0.68
CTNNA1-230ENST00000521724 ELOA2Q8IYF1 753 aaPredicted RBP10.83□□□□□ -0.68
CTNNA1-230ENST00000521724 TRIML1Q8N9V2 468 aa10.83□□□□□ -0.68
CTNNA1-230ENST00000521724 STAG1Q8WVM7 1258 aa10.83□□□□□ -0.68
CTNNA1-230ENST00000521724 CAPZA3Q96KX2 299 aa10.83□□□□□ -0.68
CTNNA1-230ENST00000521724 CARD10Q9BWT7 1032 aa10.83□□□□□ -0.68
CTNNA1-230ENST00000521724 COPRSQ9NQ92 184 aa10.83□□□□□ -0.68
CTNNA1-230ENST00000521724 HDAC6Q9UBN7 1215 aa10.83□□□□□ -0.68
CTNNA1-230ENST00000521724 ADD3Q9UEY8 706 aaKnown RBP10.83□□□□□ -0.68
CTNNA1-230ENST00000521724 SAR1BQ9Y6B6 198 aa10.83□□□□□ -0.68
CTNNA1-230ENST00000521724 MRC1P22897 1456 aa10.83□□□□□ -0.68
CTNNA1-230ENST00000521724 GRIN2DO15399 1336 aa10.83□□□□□ -0.68
CTNNA1-230ENST00000521724 MYBL2P10244 700 aa10.83□□□□□ -0.68
CTNNA1-230ENST00000521724 SARSP49591 514 aaKnown RBP10.83□□□□□ -0.68
CTNNA1-230ENST00000521724 NEXNQ0ZGT2 675 aa10.83□□□□□ -0.68
CTNNA1-230ENST00000521724 ZMYM1Q5SVZ6 1142 aa10.83□□□□□ -0.68
CTNNA1-230ENST00000521724 CYP26C1Q6V0L0 522 aa10.83□□□□□ -0.68
CTNNA1-230ENST00000521724 GRAMD1CQ8IYS0 662 aa10.83□□□□□ -0.68
CTNNA1-230ENST00000521724 NBPF3Q9H094 633 aa10.83□□□□□ -0.68
CTNNA1-230ENST00000521724 SERTAD1Q9UHV2 236 aa10.83□□□□□ -0.68
CTNNA1-230ENST00000521724 SRGAP2O75044 1071 aa10.82□□□□□ -0.68
CTNNA1-230ENST00000521724 PBX1P40424 430 aa10.82□□□□□ -0.68
CTNNA1-230ENST00000521724 STX17P56962 302 aa10.82□□□□□ -0.68
CTNNA1-230ENST00000521724 ERVK-24P63145 666 aa10.82□□□□□ -0.68
CTNNA1-230ENST00000521724 NBPF14Q5TI25 921 aa10.82□□□□□ -0.68
CTNNA1-230ENST00000521724 CC2D2BQ6DHV5 1058 aa10.82□□□□□ -0.68
CTNNA1-230ENST00000521724 APTXQ7Z2E3 356 aaKnown RBP10.82□□□□□ -0.68
CTNNA1-230ENST00000521724 ANKLE2Q86XL3 938 aa10.82□□□□□ -0.68
CTNNA1-230ENST00000521724 RPGRIP1Q96KN7 1286 aa10.82□□□□□ -0.68
CTNNA1-230ENST00000521724 NEUROD6Q96NK8 337 aa10.82□□□□□ -0.68
CTNNA1-230ENST00000521724 NUP88Q99567 741 aaPredicted RBP10.82□□□□□ -0.68
CTNNA1-230ENST00000521724 PALLDQ8WX93 1383 aa10.82□□□□□ -0.68
CTNNA1-230ENST00000521724 MAST3O60307 1309 aa10.82□□□□□ -0.68
CTNNA1-230ENST00000521724 CHUKO15111 745 aa10.82□□□□□ -0.68
CTNNA1-230ENST00000521724 SCP2P22307 547 aa10.82□□□□□ -0.68
CTNNA1-230ENST00000521724 IMMTQ16891 758 aaKnown RBP10.82□□□□□ -0.68
CTNNA1-230ENST00000521724 SPATA1Q5VX52 437 aa10.82□□□□□ -0.68
CTNNA1-230ENST00000521724 CCNI2Q6ZMN8 369 aaPredicted RBP10.82□□□□□ -0.68
CTNNA1-230ENST00000521724 UBE3BQ7Z3V4 1068 aa10.82□□□□□ -0.68
CTNNA1-230ENST00000521724 ANKRD18AQ8IVF6 992 aa10.82□□□□□ -0.68
CTNNA1-230ENST00000521724 METTL22Q9BUU2 404 aaPredicted RBP10.82□□□□□ -0.68
CTNNA1-230ENST00000521724 CD248Q9HCU0 757 aa10.82□□□□□ -0.68
CTNNA1-230ENST00000521724 ABHD10Q9NUJ1 306 aa10.82□□□□□ -0.68
CTNNA1-230ENST00000521724 ZMYM6O95789 1325 aa10.81□□□□□ -0.68
CTNNA1-230ENST00000521724 MEFVO15553 781 aaPredicted RBP10.81□□□□□ -0.68
CTNNA1-230ENST00000521724 C21orf2O43822 256 aa10.81□□□□□ -0.68
CTNNA1-230ENST00000521724 ELF1P32519 619 aa10.81□□□□□ -0.68
CTNNA1-230ENST00000521724 NF2P35240 595 aa10.81□□□□□ -0.68
CTNNA1-230ENST00000521724 TRIM29Q14134 588 aa10.81□□□□□ -0.68
CTNNA1-230ENST00000521724 RALYLQ86SE5 291 aaKnown RBP10.81□□□□□ -0.68
CTNNA1-230ENST00000521724 CAGE1Q8TC20 777 aa10.81□□□□□ -0.68
CTNNA1-230ENST00000521724 TRIM10Q9UDY6 481 aa10.81□□□□□ -0.68
CTNNA1-230ENST00000521724 SYNRGQ9UMZ2 1314 aa10.81□□□□□ -0.68
CTNNA1-230ENST00000521724 GOLGA8KD6RF30 607 aa10.81□□□□□ -0.68
CTNNA1-230ENST00000521724 FSBPO95073 299 aa10.81□□□□□ -0.68
CTNNA1-230ENST00000521724 HOXD11P31277 338 aaPredicted RBP10.81□□□□□ -0.68
CTNNA1-230ENST00000521724 CCT6AP40227 531 aaKnown RBP10.81□□□□□ -0.68
CTNNA1-230ENST00000521724 FNTAP49354 379 aa10.81□□□□□ -0.68
CTNNA1-230ENST00000521724 CKAP4Q07065 602 aaKnown RBP10.81□□□□□ -0.68
CTNNA1-230ENST00000521724 ANKRD13DQ6ZTN6 518 aa10.81□□□□□ -0.68
CTNNA1-230ENST00000521724 AMOTL1Q8IY63 956 aa10.81□□□□□ -0.68
CTNNA1-230ENST00000521724 ZKSCAN4Q969J2 545 aaPredicted RBP10.81□□□□□ -0.68
CTNNA1-230ENST00000521724 SH3GL2Q99962 352 aa10.81□□□□□ -0.68
CTNNA1-230ENST00000521724 HINFPQ9BQA5 517 aa10.81□□□□□ -0.68
CTNNA1-230ENST00000521724 RGPD5Q99666 1765 aa10.81□□□□□ -0.68
CTNNA1-230ENST00000521724 CCDC189A1A4V9 331 aa10.8□□□□□ -0.68
CTNNA1-230ENST00000521724 A6NNZ2 444 aa10.8□□□□□ -0.68
CTNNA1-230ENST00000521724 PSMD14O00487 310 aa10.8□□□□□ -0.68
CTNNA1-230ENST00000521724 ATP1A1P05023 1023 aaKnown RBP10.8□□□□□ -0.68
CTNNA1-230ENST00000521724 FECHP22830 423 aa10.8□□□□□ -0.68
CTNNA1-230ENST00000521724 PDE4DQ08499 809 aa10.8□□□□□ -0.68
CTNNA1-230ENST00000521724 TUBB8Q3ZCM7 444 aa10.8□□□□□ -0.68
CTNNA1-230ENST00000521724 SPATS2Q86XZ4 545 aaKnown RBP10.8□□□□□ -0.68
CTNNA1-230ENST00000521724 NCOA7Q8NI08 942 aa10.8□□□□□ -0.68
CTNNA1-230ENST00000521724 N4BP2L2Q92802 583 aaPredicted RBP10.8□□□□□ -0.68
CTNNA1-230ENST00000521724 PHKBQ93100 1093 aa10.8□□□□□ -0.68
CTNNA1-230ENST00000521724 RUFY1Q96T51 708 aa10.8□□□□□ -0.68
CTNNA1-230ENST00000521724 VEZTQ9HBM0 779 aa10.8□□□□□ -0.68
CTNNA1-230ENST00000521724 FAM184BQ9ULE4 1060 aa10.8□□□□□ -0.68
CTNNA1-230ENST00000521724 ATXN2Q99700 1313 aaKnown RBP10.8□□□□□ -0.68
CTNNA1-230ENST00000521724 KDM6AO15550 1401 aaPredicted RBP10.8□□□□□ -0.68
CTNNA1-230ENST00000521724 OPA1O60313 960 aa10.8□□□□□ -0.68
CTNNA1-230ENST00000521724 CDKL5O76039 1030 aa10.8□□□□□ -0.68
CTNNA1-230ENST00000521724 GRIN1Q05586 938 aa10.8□□□□□ -0.68
CTNNA1-230ENST00000521724 PPP2R5AQ15172 486 aa10.8□□□□□ -0.68
CTNNA1-230ENST00000521724 CCDC70Q6NSX1 233 aa10.8□□□□□ -0.68
CTNNA1-230ENST00000521724 KANK3Q6NY19 840 aa10.8□□□□□ -0.68
CTNNA1-230ENST00000521724 SND1Q7KZF4 910 aaKnown RBP eCLIP10.8□□□□□ -0.687e-7■□□□□ 8.6
CTNNA1-230ENST00000521724 MIEF2Q96C03 454 aa10.8□□□□□ -0.68
CTNNA1-230ENST00000521724 SLC52A2Q9HAB3 445 aa10.8□□□□□ -0.68
CTNNA1-230ENST00000521724 C5P01031 1676 aa10.8□□□□□ -0.68
CTNNA1-230ENST00000521724 N4BP3O15049 544 aa10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms