RNA–Protein interactions for RNA: ENST00000521589.5

NPIPB3-205, Transcript of nuclear pore complex interacting protein family member B3, humanhuman

TSL 3

Gene NPIPB3, Length 679 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB3-205ENST00000521589 RAB3GAP1Q15042 981 aa10.58□□□□□ -0.72
NPIPB3-205ENST00000521589 ZSCAN25Q6NSZ9 544 aa10.58□□□□□ -0.72
NPIPB3-205ENST00000521589 LBX2Q6XYB7 198 aa10.58□□□□□ -0.72
NPIPB3-205ENST00000521589 KBTBD3Q8NAB2 608 aa10.58□□□□□ -0.72
NPIPB3-205ENST00000521589 GPRC5AQ8NFJ5 357 aa10.58□□□□□ -0.72
NPIPB3-205ENST00000521589 GPATCH3Q96I76 525 aa10.58□□□□□ -0.72
NPIPB3-205ENST00000521589 RNF208Q9H0X6 261 aa10.58□□□□□ -0.72
NPIPB3-205ENST00000521589 UNC93B1Q9H1C4 597 aa10.58□□□□□ -0.72
NPIPB3-205ENST00000521589 PAK6Q9NQU5 681 aaPredicted RBP10.58□□□□□ -0.72
NPIPB3-205ENST00000521589 RBPJLQ9UBG7 517 aa10.58□□□□□ -0.72
NPIPB3-205ENST00000521589 BIN2Q9UBW5 565 aaPredicted RBP10.58□□□□□ -0.72
NPIPB3-205ENST00000521589 MYH7P12883 1935 aa10.58□□□□□ -0.72
NPIPB3-205ENST00000521589 USP17L15C9J2P7 530 aa10.57□□□□□ -0.72
NPIPB3-205ENST00000521589 USP17L13C9JLJ4 530 aa10.57□□□□□ -0.72
NPIPB3-205ENST00000521589 USP17L11C9JVI0 530 aa10.57□□□□□ -0.72
NPIPB3-205ENST00000521589 USP17L18D6R9N7 530 aa10.57□□□□□ -0.72
NPIPB3-205ENST00000521589 USP17L22D6RA61 530 aa10.57□□□□□ -0.72
NPIPB3-205ENST00000521589 USP17L17D6RBQ6 530 aa10.57□□□□□ -0.72
NPIPB3-205ENST00000521589 USP17L19D6RCP7 530 aa10.57□□□□□ -0.72
NPIPB3-205ENST00000521589 USP17L20D6RJB6 530 aa10.57□□□□□ -0.72
NPIPB3-205ENST00000521589 CHGBP05060 677 aa10.57□□□□□ -0.72
NPIPB3-205ENST00000521589 XRCC5P13010 732 aaKnown RBP10.57□□□□□ -0.72
NPIPB3-205ENST00000521589 MAPK4P31152 587 aa10.57□□□□□ -0.72
NPIPB3-205ENST00000521589 ERVK-9P63128 1117 aa10.57□□□□□ -0.72
NPIPB3-205ENST00000521589 ERVK-24P63145 666 aa10.57□□□□□ -0.72
NPIPB3-205ENST00000521589 USP17L24Q0WX57 530 aa10.57□□□□□ -0.72
NPIPB3-205ENST00000521589 SEPT2Q15019 361 aa10.57□□□□□ -0.72
NPIPB3-205ENST00000521589 C12orf60Q5U649 245 aa10.57□□□□□ -0.72
NPIPB3-205ENST00000521589 TMEM179Q6ZVK1 233 aa10.57□□□□□ -0.72
NPIPB3-205ENST00000521589 SLC44A5Q8NCS7 719 aa10.57□□□□□ -0.72
NPIPB3-205ENST00000521589 U2AF1L4Q8WU68 220 aaKnown RBP10.57□□□□□ -0.72
NPIPB3-205ENST00000521589 SOCS4Q8WXH5 440 aa10.57□□□□□ -0.72
NPIPB3-205ENST00000521589 CCDC17Q96LX7 622 aa10.57□□□□□ -0.72
NPIPB3-205ENST00000521589 PUS7LQ9H0K6 701 aaKnown RBP10.57□□□□□ -0.72
NPIPB3-205ENST00000521589 BCL11AQ9H165 835 aa10.57□□□□□ -0.72
NPIPB3-205ENST00000521589 RABGAP1Q9Y3P9 1069 aa10.57□□□□□ -0.72
NPIPB3-205ENST00000521589 TTC41PQ6P2S7 1318 aa10.57□□□□□ -0.72
NPIPB3-205ENST00000521589 A0A1W2PRG0 241 aa10.56□□□□□ -0.72
NPIPB3-205ENST00000521589 USP17L12C9JPN9 530 aa10.56□□□□□ -0.72
NPIPB3-205ENST00000521589 USP17L21D6R901 530 aa10.56□□□□□ -0.72
NPIPB3-205ENST00000521589 SGPL1O95470 568 aa10.56□□□□□ -0.72
NPIPB3-205ENST00000521589 HMGCRP04035 888 aa10.56□□□□□ -0.72
NPIPB3-205ENST00000521589 ZFYP08048 801 aaPredicted RBP10.56□□□□□ -0.72
NPIPB3-205ENST00000521589 GIMAP6Q6P9H5 292 aa10.56□□□□□ -0.72
NPIPB3-205ENST00000521589 CATSPERGQ6ZRH7 1159 aa10.56□□□□□ -0.72
NPIPB3-205ENST00000521589 C16orf86Q6ZW13 317 aa10.56□□□□□ -0.72
NPIPB3-205ENST00000521589 USP6NLQ92738 828 aa10.56□□□□□ -0.72
NPIPB3-205ENST00000521589 GCC1Q96CN9 775 aa10.56□□□□□ -0.72
NPIPB3-205ENST00000521589 DDRGK1Q96HY6 314 aa10.56□□□□□ -0.72
NPIPB3-205ENST00000521589 STRBPQ96SI9 672 aaKnown RBP10.56□□□□□ -0.72
NPIPB3-205ENST00000521589 PLXNB2O15031 1838 aa10.56□□□□□ -0.72
NPIPB3-205ENST00000521589 BAZ2AQ9UIF9 1905 aaKnown RBP10.55□□□□□ -0.72
NPIPB3-205ENST00000521589 CYP2D7A0A087X1C5 515 aa10.55□□□□□ -0.72
NPIPB3-205ENST00000521589 PEX10O60683 326 aa10.55□□□□□ -0.72
NPIPB3-205ENST00000521589 CNMDO75829 334 aa10.55□□□□□ -0.72
NPIPB3-205ENST00000521589 CDK8P49336 464 aa10.55□□□□□ -0.72
NPIPB3-205ENST00000521589 ZYXQ15942 572 aaKnown RBP10.55□□□□□ -0.72
NPIPB3-205ENST00000521589 Q3C1V9 767 aa10.55□□□□□ -0.72
NPIPB3-205ENST00000521589 MORN1Q5T089 497 aa10.55□□□□□ -0.72
NPIPB3-205ENST00000521589 MAP3K21Q5TCX8 1036 aa10.55□□□□□ -0.72
NPIPB3-205ENST00000521589 SIAH1Q8IUQ4 282 aa10.55□□□□□ -0.72
NPIPB3-205ENST00000521589 AMOTL1Q8IY63 956 aa10.55□□□□□ -0.72
NPIPB3-205ENST00000521589 APPBP2Q92624 585 aa10.55□□□□□ -0.72
NPIPB3-205ENST00000521589 LPAR1Q92633 364 aa10.55□□□□□ -0.72
NPIPB3-205ENST00000521589 OSBP2Q969R2 916 aa10.55□□□□□ -0.72
NPIPB3-205ENST00000521589 DYNLL2Q96FJ2 89 aa10.55□□□□□ -0.72
NPIPB3-205ENST00000521589 NUDT12Q9BQG2 462 aa10.55□□□□□ -0.72
NPIPB3-205ENST00000521589 CRISPLD2Q9H0B8 497 aa10.55□□□□□ -0.72
NPIPB3-205ENST00000521589 PORCNQ9H237 461 aa10.55□□□□□ -0.72
NPIPB3-205ENST00000521589 RPAP3Q9H6T3 665 aaPredicted RBP10.55□□□□□ -0.72
NPIPB3-205ENST00000521589 ARPP21Q9UBL0 812 aaPredicted RBP10.55□□□□□ -0.72
NPIPB3-205ENST00000521589 SLC4A4Q9Y6R1 1079 aa10.55□□□□□ -0.72
NPIPB3-205ENST00000521589 TRIOBPQ9H2D6 2365 aa10.55□□□□□ -0.72
NPIPB3-205ENST00000521589 SALL3Q9BXA9 1300 aa10.55□□□□□ -0.72
NPIPB3-205ENST00000521589 ROBO3Q96MS0 1386 aa10.54□□□□□ -0.72
NPIPB3-205ENST00000521589 SPDYE16A6NNV3 312 aaPredicted RBP10.54□□□□□ -0.72
NPIPB3-205ENST00000521589 GSG1L2A8MUP6 293 aa10.54□□□□□ -0.72
NPIPB3-205ENST00000521589 SMIM22K7EJ46 135 aa10.54□□□□□ -0.72
NPIPB3-205ENST00000521589 MPHOSPH10O00566 681 aaKnown RBP10.54□□□□□ -0.72
NPIPB3-205ENST00000521589 GLRX3O76003 335 aaKnown RBP10.54□□□□□ -0.72
NPIPB3-205ENST00000521589 FARP2O94887 1054 aaPredicted RBP10.54□□□□□ -0.72
NPIPB3-205ENST00000521589 AKR1B1P15121 316 aa10.54□□□□□ -0.72
NPIPB3-205ENST00000521589 CCNA1P78396 465 aa10.54□□□□□ -0.72
NPIPB3-205ENST00000521589 SBK1Q52WX2 424 aa10.54□□□□□ -0.72
NPIPB3-205ENST00000521589 TSHZ3Q63HK5 1081 aa10.54□□□□□ -0.72
NPIPB3-205ENST00000521589 CTR9Q6PD62 1173 aa10.54□□□□□ -0.72
NPIPB3-205ENST00000521589 GPR142Q7Z601 462 aa10.54□□□□□ -0.72
NPIPB3-205ENST00000521589 TRMT44Q8IYL2 757 aaKnown RBP10.54□□□□□ -0.72
NPIPB3-205ENST00000521589 PI4K2BQ8TCG2 481 aa10.54□□□□□ -0.72
NPIPB3-205ENST00000521589 TRIB2Q92519 343 aa10.54□□□□□ -0.72
NPIPB3-205ENST00000521589 PAGR1Q9BTK6 254 aa10.54□□□□□ -0.72
NPIPB3-205ENST00000521589 XRN2Q9H0D6 950 aaKnown RBP eCLIP10.54□□□□□ -0.72
NPIPB3-205ENST00000521589 TMX2Q9Y320 296 aa10.54□□□□□ -0.72
NPIPB3-205ENST00000521589 RPTORQ8N122 1335 aa10.54□□□□□ -0.72
NPIPB3-205ENST00000521589 ERC2O15083 957 aa10.53□□□□□ -0.72
NPIPB3-205ENST00000521589 RNF113AO15541 343 aaKnown RBP10.53□□□□□ -0.72
NPIPB3-205ENST00000521589 HOXC6P09630 235 aa10.53□□□□□ -0.72
NPIPB3-205ENST00000521589 RGS2P41220 211 aa10.53□□□□□ -0.72
NPIPB3-205ENST00000521589 ICA1Q05084 483 aa10.53□□□□□ -0.72
NPIPB3-205ENST00000521589 HDAC1Q13547 482 aaPredicted RBP10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms