RNA–Protein interactions for RNA: ENST00000521559.1

VPS13B-209, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 3

Gene VPS13B, Length 466 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-209ENST00000521559 MRPL58Q14197 206 aaKnown RBP5.39□□□□□ -1.55
VPS13B-209ENST00000521559 CDKAL1Q5VV42 579 aa5.39□□□□□ -1.55
VPS13B-209ENST00000521559 FAM196AQ6ZSG2 479 aa5.39□□□□□ -1.55
VPS13B-209ENST00000521559 ERMP1Q7Z2K6 904 aa5.39□□□□□ -1.55
VPS13B-209ENST00000521559 DPH2Q9BQC3 489 aaPredicted RBP5.39□□□□□ -1.55
VPS13B-209ENST00000521559 MBNL3Q9NUK0 354 aaKnown RBP5.39□□□□□ -1.55
VPS13B-209ENST00000521559 KBTBD4Q9NVX7 518 aa5.39□□□□□ -1.55
VPS13B-209ENST00000521559 GGT7Q9UJ14 662 aa5.39□□□□□ -1.55
VPS13B-209ENST00000521559 KCNH3Q9ULD8 1083 aa5.39□□□□□ -1.55
VPS13B-209ENST00000521559 SUPT16HQ9Y5B9 1047 aaKnown RBP5.39□□□□□ -1.55
VPS13B-209ENST00000521559 PRR36Q9H6K5 1346 aa5.39□□□□□ -1.55
VPS13B-209ENST00000521559 HMGXB3Q12766 1538 aa5.38□□□□□ -1.55
VPS13B-209ENST00000521559 PRR33A8MZF0 331 aa5.38□□□□□ -1.55
VPS13B-209ENST00000521559 EIF4A3P38919 411 aaKnown RBP5.38□□□□□ -1.55
VPS13B-209ENST00000521559 REC114Q7Z4M0 266 aa5.38□□□□□ -1.55
VPS13B-209ENST00000521559 SLFN12Q8IYM2 578 aa5.38□□□□□ -1.55
VPS13B-209ENST00000521559 TRIT1Q9H3H1 467 aaKnown RBP5.38□□□□□ -1.55
VPS13B-209ENST00000521559 REV1Q9UBZ9 1251 aa5.38□□□□□ -1.55
VPS13B-209ENST00000521559 CORINQ9Y5Q5 1042 aa5.38□□□□□ -1.55
VPS13B-209ENST00000521559 H3BS24 57 aa5.37□□□□□ -1.55
VPS13B-209ENST00000521559 TNNI2P48788 182 aa5.37□□□□□ -1.55
VPS13B-209ENST00000521559 MFAP1P55081 439 aaKnown RBP5.37□□□□□ -1.55
VPS13B-209ENST00000521559 TMPRSS7Q7RTY8 843 aa5.37□□□□□ -1.55
VPS13B-209ENST00000521559 TMEM87AQ8NBN3 555 aa5.37□□□□□ -1.55
VPS13B-209ENST00000521559 LRRN4CLQ8ND94 238 aa5.37□□□□□ -1.55
VPS13B-209ENST00000521559 DNAJB8Q8NHS0 232 aa5.37□□□□□ -1.55
VPS13B-209ENST00000521559 CCDC74BQ96LY2 380 aa5.37□□□□□ -1.55
VPS13B-209ENST00000521559 LRRC3Q9BY71 257 aa5.37□□□□□ -1.55
VPS13B-209ENST00000521559 KCNQ5Q9NR82 932 aa5.37□□□□□ -1.55
VPS13B-209ENST00000521559 SEMA3GQ9NS98 782 aa5.37□□□□□ -1.55
VPS13B-209ENST00000521559 ST14Q9Y5Y6 855 aa5.37□□□□□ -1.55
VPS13B-209ENST00000521559 WIZO95785 1651 aa5.37□□□□□ -1.55
VPS13B-209ENST00000521559 HTR3BO95264 441 aa5.36□□□□□ -1.55
VPS13B-209ENST00000521559 PAPLNO95428 1278 aa5.36□□□□□ -1.55
VPS13B-209ENST00000521559 ZNF16P17020 682 aaPredicted RBP5.36□□□□□ -1.55
VPS13B-209ENST00000521559 GARTP22102 1010 aa5.36□□□□□ -1.55
VPS13B-209ENST00000521559 AFMP43652 599 aa5.36□□□□□ -1.55
VPS13B-209ENST00000521559 TNK2Q07912 1038 aa5.36□□□□□ -1.55
VPS13B-209ENST00000521559 PHACTR4Q8IZ21 702 aa5.36□□□□□ -1.55
VPS13B-209ENST00000521559 FLAD1Q8NFF5 587 aa5.36□□□□□ -1.55
VPS13B-209ENST00000521559 UBE2FQ969M7 185 aa5.36□□□□□ -1.55
VPS13B-209ENST00000521559 CARS2Q9HA77 564 aaKnown RBP5.36□□□□□ -1.55
VPS13B-209ENST00000521559 GOLGA2P5Q9HBQ8 144 aa5.36□□□□□ -1.55
VPS13B-209ENST00000521559 ATP13A1Q9HD20 1204 aa5.36□□□□□ -1.55
VPS13B-209ENST00000521559 GPATCH2Q9NW75 528 aa5.36□□□□□ -1.55
VPS13B-209ENST00000521559 ZSWIM5Q9P217 1185 aa5.36□□□□□ -1.55
VPS13B-209ENST00000521559 ADAMTS6Q9UKP5 1117 aa5.36□□□□□ -1.55
VPS13B-209ENST00000521559 TOP2AP11388 1531 aaKnown RBP5.35□□□□□ -1.55
VPS13B-209ENST00000521559 CNTNAP4Q9C0A0 1308 aa5.35□□□□□ -1.55
VPS13B-209ENST00000521559 UPK3BL1B0FP48 263 aa5.35□□□□□ -1.55
VPS13B-209ENST00000521559 UPK3BL2E5RIL1 263 aa5.35□□□□□ -1.55
VPS13B-209ENST00000521559 GRIN3BO60391 1043 aa5.35□□□□□ -1.55
VPS13B-209ENST00000521559 GREM1O60565 184 aa5.35□□□□□ -1.55
VPS13B-209ENST00000521559 GBP1P32455 592 aa5.35□□□□□ -1.55
VPS13B-209ENST00000521559 FBXL19Q6PCT2 694 aa5.35□□□□□ -1.55
VPS13B-209ENST00000521559 ZNF296Q8WUU4 475 aaPredicted RBP5.35□□□□□ -1.55
VPS13B-209ENST00000521559 RNF141Q8WVD5 230 aa5.35□□□□□ -1.55
VPS13B-209ENST00000521559 TMEM40Q8WWA1 233 aa5.35□□□□□ -1.55
VPS13B-209ENST00000521559 COPRSQ9NQ92 184 aa5.35□□□□□ -1.55
VPS13B-209ENST00000521559 KLHL3Q9UH77 587 aa5.35□□□□□ -1.55
VPS13B-209ENST00000521559 POLR3KQ9Y2Y1 108 aaPredicted RBP5.35□□□□□ -1.55
VPS13B-209ENST00000521559 TLR3O15455 904 aaKnown RBP5.34□□□□□ -1.55
VPS13B-209ENST00000521559 YBX3P16989 372 aaKnown RBP eCLIP5.34□□□□□ -1.55
VPS13B-209ENST00000521559 PPP1R13LQ8WUF5 828 aa5.34□□□□□ -1.55
VPS13B-209ENST00000521559 FAM168AQ92567 244 aa5.34□□□□□ -1.55
VPS13B-209ENST00000521559 SYTL4Q96C24 671 aaPredicted RBP5.34□□□□□ -1.55
VPS13B-209ENST00000521559 ASPNQ9BXN1 380 aa5.34□□□□□ -1.55
VPS13B-209ENST00000521559 GPR62Q9BZJ7 368 aa5.34□□□□□ -1.55
VPS13B-209ENST00000521559 PRDM7Q9NQW5 492 aa5.34□□□□□ -1.55
VPS13B-209ENST00000521559 METTL5Q9NRN9 209 aaKnown RBP5.34□□□□□ -1.55
VPS13B-209ENST00000521559 FAM53CQ9NYF3 392 aa5.34□□□□□ -1.55
VPS13B-209ENST00000521559 RBM47A0AV96 593 aaKnown RBP5.33□□□□□ -1.56
VPS13B-209ENST00000521559 CHURC1-FNTBB4DL54 471 aa5.33□□□□□ -1.56
VPS13B-209ENST00000521559 ATE1O95260 518 aa5.33□□□□□ -1.56
VPS13B-209ENST00000521559 ZNF76P36508 570 aa5.33□□□□□ -1.56
VPS13B-209ENST00000521559 GDNFP39905 211 aa5.33□□□□□ -1.56
VPS13B-209ENST00000521559 ZNF165P49910 485 aa5.33□□□□□ -1.56
VPS13B-209ENST00000521559 RAD51AP2Q09MP3 1159 aa5.33□□□□□ -1.56
VPS13B-209ENST00000521559 APOBRQ0VD83 1088 aa5.33□□□□□ -1.56
VPS13B-209ENST00000521559 KCNMB1Q16558 191 aa5.33□□□□□ -1.56
VPS13B-209ENST00000521559 LRRFIP1Q32MZ4 808 aaKnown RBP5.33□□□□□ -1.56
VPS13B-209ENST00000521559 REXO1Q8N1G1 1221 aaKnown RBP5.33□□□□□ -1.56
VPS13B-209ENST00000521559 DTWD2Q8NBA8 298 aa5.33□□□□□ -1.56
VPS13B-209ENST00000521559 FBXO27Q8NI29 283 aa5.33□□□□□ -1.56
VPS13B-209ENST00000521559 ALPK1Q96QP1 1244 aa5.33□□□□□ -1.56
VPS13B-209ENST00000521559 KRTAP9-2Q9BYQ4 174 aa5.33□□□□□ -1.56
VPS13B-209ENST00000521559 ASCC2Q9H1I8 757 aaPredicted RBP5.33□□□□□ -1.56
VPS13B-209ENST00000521559 BRMS1Q9HCU9 246 aa5.33□□□□□ -1.56
VPS13B-209ENST00000521559 GMIPQ9P107 970 aa5.33□□□□□ -1.56
VPS13B-209ENST00000521559 CTNND2Q9UQB3 1225 aa5.33□□□□□ -1.56
VPS13B-209ENST00000521559 PCDHB14Q9Y5E9 798 aa5.33□□□□□ -1.56
VPS13B-209ENST00000521559 CCDC88BA6NC98 1476 aa5.32□□□□□ -1.56
VPS13B-209ENST00000521559 RGS13O14921 159 aa5.32□□□□□ -1.56
VPS13B-209ENST00000521559 RAC2P15153 192 aa5.32□□□□□ -1.56
VPS13B-209ENST00000521559 RAG1P15918 1043 aa5.32□□□□□ -1.56
VPS13B-209ENST00000521559 TPP2P29144 1249 aaPredicted RBP5.32□□□□□ -1.56
VPS13B-209ENST00000521559 MCM4P33991 863 aa5.32□□□□□ -1.56
VPS13B-209ENST00000521559 RNF4P78317 190 aa5.32□□□□□ -1.56
VPS13B-209ENST00000521559 ZSWIM9Q86XI8 627 aa5.32□□□□□ -1.56
VPS13B-209ENST00000521559 CREG2Q8IUH2 290 aa5.32□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 112.1 ms