RNA–Protein interactions for RNA: ENST00000521216.5

SKP1-208, Transcript of S-phase kinase associated protein 1, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SKP1, Length 899 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-208ENST00000521216 CDCP2Q5VXM1 449 aa8.08□□□□□ -1.12
SKP1-208ENST00000521216 ARHGAP27Q6ZUM4 889 aa8.08□□□□□ -1.12
SKP1-208ENST00000521216 MEIS3P2A8K0S8 358 aa8.07□□□□□ -1.12
SKP1-208ENST00000521216 EOMESO95936 686 aa8.07□□□□□ -1.12
SKP1-208ENST00000521216 ETFBP38117 255 aa8.07□□□□□ -1.12
SKP1-208ENST00000521216 SF3A1Q15459 793 aaKnown RBP8.07□□□□□ -1.12
SKP1-208ENST00000521216 RBBP8NLQ8NC74 664 aaPredicted RBP8.07□□□□□ -1.12
SKP1-208ENST00000521216 OR6P1Q8NGX9 317 aa8.07□□□□□ -1.12
SKP1-208ENST00000521216 TM9SF2Q99805 663 aa8.07□□□□□ -1.12
SKP1-208ENST00000521216 METTL22Q9BUU2 404 aaPredicted RBP8.07□□□□□ -1.12
SKP1-208ENST00000521216 CEP131Q9UPN4 1083 aa8.07□□□□□ -1.12
SKP1-208ENST00000521216 LEMD3Q9Y2U8 911 aa8.07□□□□□ -1.12
SKP1-208ENST00000521216 RGS13O14921 159 aa8.06□□□□□ -1.12
SKP1-208ENST00000521216 GUCY2CP25092 1073 aa8.06□□□□□ -1.12
SKP1-208ENST00000521216 SREK1Q8WXA9 508 aaKnown RBP8.06□□□□□ -1.12
SKP1-208ENST00000521216 SLC9A7Q96T83 725 aa8.06□□□□□ -1.12
SKP1-208ENST00000521216 ZNF408Q9H9D4 720 aa8.06□□□□□ -1.12
SKP1-208ENST00000521216 PRDM5Q9NQX1 630 aaPredicted RBP8.06□□□□□ -1.12
SKP1-208ENST00000521216 GTF2IRD1Q9UHL9 959 aa8.06□□□□□ -1.12
SKP1-208ENST00000521216 K7ELQ4 463 aaPredicted RBP8.05□□□□□ -1.12
SKP1-208ENST00000521216 STK10O94804 968 aaKnown RBP8.05□□□□□ -1.12
SKP1-208ENST00000521216 ETV3P41162 512 aa8.05□□□□□ -1.12
SKP1-208ENST00000521216 SLC51AQ86UW1 340 aa8.05□□□□□ -1.12
SKP1-208ENST00000521216 ZDHHC13Q8IUH4 622 aa8.05□□□□□ -1.12
SKP1-208ENST00000521216 FAM169BQ8N8A8 192 aa8.05□□□□□ -1.12
SKP1-208ENST00000521216 PPP1R13LQ8WUF5 828 aa8.05□□□□□ -1.12
SKP1-208ENST00000521216 DHX38Q92620 1227 aaKnown RBP8.05□□□□□ -1.12
SKP1-208ENST00000521216 R3HCC1Q9Y3T6 440 aaKnown RBP8.05□□□□□ -1.12
SKP1-208ENST00000521216 CNTNAP4Q9C0A0 1308 aa8.04□□□□□ -1.12
SKP1-208ENST00000521216 RBAK-RBAKDNI3L0D1 243 aa8.04□□□□□ -1.12
SKP1-208ENST00000521216 SMAD7O15105 426 aaKnown RBP8.04□□□□□ -1.12
SKP1-208ENST00000521216 CYP26A1O43174 497 aa8.04□□□□□ -1.12
SKP1-208ENST00000521216 CBX7O95931 251 aa8.04□□□□□ -1.12
SKP1-208ENST00000521216 ACRP10323 421 aa8.04□□□□□ -1.12
SKP1-208ENST00000521216 CYP7A1P22680 504 aa8.04□□□□□ -1.12
SKP1-208ENST00000521216 ZNF746Q6NUN9 644 aaPredicted RBP8.04□□□□□ -1.12
SKP1-208ENST00000521216 UNC5AQ6ZN44 842 aa8.04□□□□□ -1.12
SKP1-208ENST00000521216 TTC6Q86TZ1 520 aa8.04□□□□□ -1.12
SKP1-208ENST00000521216 FAM181AQ8N9Y4 354 aa8.04□□□□□ -1.12
SKP1-208ENST00000521216 DNAJB8Q8NHS0 232 aa8.04□□□□□ -1.12
SKP1-208ENST00000521216 HEXIM2Q96MH2 286 aaKnown RBP8.04□□□□□ -1.12
SKP1-208ENST00000521216 TNFRSF10CO14798 259 aa8.03□□□□□ -1.12
SKP1-208ENST00000521216 UBOX5O94941 541 aa8.03□□□□□ -1.12
SKP1-208ENST00000521216 TGFB1P01137 390 aa8.03□□□□□ -1.12
SKP1-208ENST00000521216 ZYXQ15942 572 aaKnown RBP8.03□□□□□ -1.12
SKP1-208ENST00000521216 SFRP5Q5T4F7 317 aa8.03□□□□□ -1.12
SKP1-208ENST00000521216 INTS3Q68E01 1043 aaKnown RBP8.03□□□□□ -1.12
SKP1-208ENST00000521216 SLC6A18Q96N87 628 aa8.03□□□□□ -1.12
SKP1-208ENST00000521216 PIM2Q9P1W9 311 aa8.03□□□□□ -1.12
SKP1-208ENST00000521216 USP35Q9P2H5 1018 aa8.03□□□□□ -1.12
SKP1-208ENST00000521216 GNAT3A8MTJ3 354 aa8.02□□□□□ -1.13
SKP1-208ENST00000521216 CLEC3AO75596 197 aa8.02□□□□□ -1.13
SKP1-208ENST00000521216 ITIH2P19823 946 aa8.02□□□□□ -1.13
SKP1-208ENST00000521216 TMEM192Q8IY95 271 aa8.02□□□□□ -1.13
SKP1-208ENST00000521216 ZNF512BQ96KM6 892 aaPredicted RBP8.02□□□□□ -1.13
SKP1-208ENST00000521216 DRC1Q96MC2 740 aa8.02□□□□□ -1.13
SKP1-208ENST00000521216 KREMEN1Q96MU8 473 aa8.02□□□□□ -1.13
SKP1-208ENST00000521216 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP8.02□□□□□ -1.13
SKP1-208ENST00000521216 FAM86C1Q9NVL1 165 aa8.02□□□□□ -1.13
SKP1-208ENST00000521216 PRKAG3Q9UGI9 489 aa8.02□□□□□ -1.13
SKP1-208ENST00000521216 A0A1W2PQH9 124 aa8.01□□□□□ -1.13
SKP1-208ENST00000521216 PRR19A6NJB7 356 aa8.01□□□□□ -1.13
SKP1-208ENST00000521216 TNNI3KQ59H18 835 aa8.01□□□□□ -1.13
SKP1-208ENST00000521216 LARP1BQ659C4 914 aaKnown RBP8.01□□□□□ -1.13
SKP1-208ENST00000521216 ANKS3Q6ZW76 656 aa8.01□□□□□ -1.13
SKP1-208ENST00000521216 FAM214BQ7L5A3 538 aa8.01□□□□□ -1.13
SKP1-208ENST00000521216 TAB3Q8N5C8 712 aaPredicted RBP8.01□□□□□ -1.13
SKP1-208ENST00000521216 DHRS1Q96LJ7 313 aa8.01□□□□□ -1.13
SKP1-208ENST00000521216 TNKS2Q9H2K2 1166 aa8.01□□□□□ -1.13
SKP1-208ENST00000521216 ACTR10Q9NZ32 417 aa8.01□□□□□ -1.13
SKP1-208ENST00000521216 MAPK8IP1Q9UQF2 711 aa8.01□□□□□ -1.13
SKP1-208ENST00000521216 PRR33A8MZF0 331 aa8□□□□□ -1.13
SKP1-208ENST00000521216 FAM155AB1AL88 458 aaPredicted RBP8□□□□□ -1.13
SKP1-208ENST00000521216 LRRN2O75325 713 aa8□□□□□ -1.13
SKP1-208ENST00000521216 CCNFP41002 786 aa8□□□□□ -1.13
SKP1-208ENST00000521216 CPSF6Q16630 551 aaKnown RBP eCLIP8□□□□□ -1.13
SKP1-208ENST00000521216 HNRNPLLQ8WVV9 542 aaKnown RBP8□□□□□ -1.13
SKP1-208ENST00000521216 MKRN2Q9H000 416 aaKnown RBP8□□□□□ -1.13
SKP1-208ENST00000521216 PCDHB10Q9UN67 800 aa8□□□□□ -1.13
SKP1-208ENST00000521216 SLC12A7Q9Y666 1083 aa8□□□□□ -1.13
SKP1-208ENST00000521216 TP53P04637 393 aaPredicted RBP7.99□□□□□ -1.13
SKP1-208ENST00000521216 FOSL1P15407 271 aa7.99□□□□□ -1.13
SKP1-208ENST00000521216 HOXA10P31260 410 aaPredicted RBP7.99□□□□□ -1.13
SKP1-208ENST00000521216 TDRD10Q5VZ19 366 aaKnown RBP7.99□□□□□ -1.13
SKP1-208ENST00000521216 CKAP2LQ8IYA6 745 aa7.99□□□□□ -1.13
SKP1-208ENST00000521216 C19orf47Q8N9M1 422 aaKnown RBP7.99□□□□□ -1.13
SKP1-208ENST00000521216 RNF141Q8WVD5 230 aa7.99□□□□□ -1.13
SKP1-208ENST00000521216 DNAJC2Q99543 621 aaKnown RBP7.99□□□□□ -1.13
SKP1-208ENST00000521216 U3KQE9 123 aa7.99□□□□□ -1.13
SKP1-208ENST00000521216 LTBP3Q9NS15 1303 aa7.99□□□□□ -1.13
SKP1-208ENST00000521216 IGF2BP3O00425 579 aaKnown RBP eCLIP7.98□□□□□ -1.13
SKP1-208ENST00000521216 ITGB7P26010 798 aa7.98□□□□□ -1.13
SKP1-208ENST00000521216 GRIK1P39086 918 aa7.98□□□□□ -1.13
SKP1-208ENST00000521216 CASP7P55210 303 aa7.98□□□□□ -1.13
SKP1-208ENST00000521216 OXCT1P55809 520 aa7.98□□□□□ -1.13
SKP1-208ENST00000521216 RNF4P78317 190 aa7.98□□□□□ -1.13
SKP1-208ENST00000521216 GNPTABQ3T906 1256 aa7.98□□□□□ -1.13
SKP1-208ENST00000521216 CDKAL1Q5VV42 579 aa7.98□□□□□ -1.13
SKP1-208ENST00000521216 CCDC144CPQ8IYA2 1237 aa7.98□□□□□ -1.13
SKP1-208ENST00000521216 PLD6Q8N2A8 252 aaKnown RBP7.98□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms