RNA–Protein interactions for RNA: ENST00000520857.5

TRAPPC9-208, Transcript of trafficking protein particle complex 9, humanhuman

TSL 1 (best)

Gene TRAPPC9, Length 3,693 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-208ENST00000520857 SHTN1A0MZ66 631 aa14.47□□□□□ -0.09
TRAPPC9-208ENST00000520857 FAM205CA6NFA0 338 aa14.47□□□□□ -0.09
TRAPPC9-208ENST00000520857 EBAG9O00559 213 aa14.47□□□□□ -0.09
TRAPPC9-208ENST00000520857 MCAMP43121 646 aa14.47□□□□□ -0.09
TRAPPC9-208ENST00000520857 TTF1Q15361 905 aaPredicted RBP14.47□□□□□ -0.09
TRAPPC9-208ENST00000520857 KIF6Q6ZMV9 814 aa14.47□□□□□ -0.09
TRAPPC9-208ENST00000520857 DEXIO95424 95 aa14.46□□□□□ -0.09
TRAPPC9-208ENST00000520857 TUBBP07437 444 aa14.46□□□□□ -0.09
TRAPPC9-208ENST00000520857 MCM3P25205 808 aa14.46□□□□□ -0.09
TRAPPC9-208ENST00000520857 IQSEC3Q9UPP2 1182 aaPredicted RBP14.46□□□□□ -0.09
TRAPPC9-208ENST00000520857 SAR1BQ9Y6B6 198 aa14.46□□□□□ -0.09
TRAPPC9-208ENST00000520857 EPN1Q9Y6I3 576 aaPredicted RBP14.46□□□□□ -0.09
TRAPPC9-208ENST00000520857 SLIT1O75093 1534 aa14.46□□□□□ -0.09
TRAPPC9-208ENST00000520857 GOLGA6CA6NDK9 693 aa14.46□□□□□ -0.09
TRAPPC9-208ENST00000520857 NBPF26B4DH59 902 aa14.46□□□□□ -0.09
TRAPPC9-208ENST00000520857 GOLGA6DP0CG33 693 aa14.46□□□□□ -0.09
TRAPPC9-208ENST00000520857 PDE6AP16499 860 aa14.46□□□□□ -0.09
TRAPPC9-208ENST00000520857 TRIM21P19474 475 aaKnown RBP14.46□□□□□ -0.09
TRAPPC9-208ENST00000520857 MAP3K12Q12852 859 aa14.46□□□□□ -0.09
TRAPPC9-208ENST00000520857 NBPF14Q5TI25 921 aa14.46□□□□□ -0.09
TRAPPC9-208ENST00000520857 CCDC181Q5TID7 509 aa14.46□□□□□ -0.09
TRAPPC9-208ENST00000520857 NBPF10Q6P3W6 841 aaKnown RBP14.46□□□□□ -0.09
TRAPPC9-208ENST00000520857 NBPF15Q8N660 670 aa14.46□□□□□ -0.09
TRAPPC9-208ENST00000520857 PLIN2Q99541 437 aa14.46□□□□□ -0.09
TRAPPC9-208ENST00000520857 UBXN6Q9BZV1 441 aa14.46□□□□□ -0.09
TRAPPC9-208ENST00000520857 GOLGA6AQ9NYA3 693 aa14.46□□□□□ -0.09
TRAPPC9-208ENST00000520857 ABCF2Q9UG63 623 aa14.46□□□□□ -0.09
TRAPPC9-208ENST00000520857 GYPCP04921 128 aa14.46□□□□□ -0.1
TRAPPC9-208ENST00000520857 CTCFLQ8NI51 663 aaPredicted RBP14.46□□□□□ -0.1
TRAPPC9-208ENST00000520857 HNRNPLLQ8WVV9 542 aaKnown RBP14.46□□□□□ -0.1
TRAPPC9-208ENST00000520857 LRP2BPQ9P2M1 347 aa14.46□□□□□ -0.1
TRAPPC9-208ENST00000520857 SLC4A4Q9Y6R1 1079 aa14.46□□□□□ -0.1
TRAPPC9-208ENST00000520857 PIK3C2AO00443 1686 aa14.46□□□□□ -0.1
TRAPPC9-208ENST00000520857 FMNL1O95466 1100 aaPredicted RBP14.45□□□□□ -0.1
TRAPPC9-208ENST00000520857 CD44P16070 742 aaKnown RBP14.45□□□□□ -0.1
TRAPPC9-208ENST00000520857 ADD2P35612 726 aa14.45□□□□□ -0.1
TRAPPC9-208ENST00000520857 TOB1P50616 345 aaPredicted RBP14.45□□□□□ -0.1
TRAPPC9-208ENST00000520857 SETQ01105 290 aaPredicted RBP14.45□□□□□ -0.1
TRAPPC9-208ENST00000520857 SPAG1Q07617 926 aa14.45□□□□□ -0.1
TRAPPC9-208ENST00000520857 KRT31Q15323 416 aa14.45□□□□□ -0.1
TRAPPC9-208ENST00000520857 SYNE4Q8N205 404 aa14.45□□□□□ -0.1
TRAPPC9-208ENST00000520857 CHP1Q99653 195 aa14.45□□□□□ -0.1
TRAPPC9-208ENST00000520857 LY9Q9HBG7 655 aa14.45□□□□□ -0.1
TRAPPC9-208ENST00000520857 PIH1D3Q9NQM4 214 aaKnown RBP14.45□□□□□ -0.1
TRAPPC9-208ENST00000520857 SEC31BQ9NQW1 1179 aa14.45□□□□□ -0.1
TRAPPC9-208ENST00000520857 ADD3Q9UEY8 706 aaKnown RBP14.45□□□□□ -0.1
TRAPPC9-208ENST00000520857 SRPRBQ9Y5M8 271 aaKnown RBP14.45□□□□□ -0.1
TRAPPC9-208ENST00000520857 CPDO75976 1380 aa14.45□□□□□ -0.1
TRAPPC9-208ENST00000520857 LRRC31Q6UY01 552 aa14.45□□□□□ -0.1
TRAPPC9-208ENST00000520857 RASGRP2Q7LDG7 609 aa14.45□□□□□ -0.1
TRAPPC9-208ENST00000520857 NKX2-3Q8TAU0 364 aa14.45□□□□□ -0.1
TRAPPC9-208ENST00000520857 TRIM47Q96LD4 638 aa14.45□□□□□ -0.1
TRAPPC9-208ENST00000520857 KRT23Q9C075 422 aa14.45□□□□□ -0.1
TRAPPC9-208ENST00000520857 V9GY48 417 aaPredicted RBP14.45□□□□□ -0.1
TRAPPC9-208ENST00000520857 ANKRD18BA2A2Z9 1011 aa14.45□□□□□ -0.1
TRAPPC9-208ENST00000520857 FOXP2O15409 715 aa14.45□□□□□ -0.1
TRAPPC9-208ENST00000520857 IDEP14735 1019 aa14.45□□□□□ -0.1
TRAPPC9-208ENST00000520857 MCM7P33993 719 aa14.45□□□□□ -0.1
TRAPPC9-208ENST00000520857 CASP7P55210 303 aa14.45□□□□□ -0.1
TRAPPC9-208ENST00000520857 SND1Q7KZF4 910 aaKnown RBP eCLIP14.45□□□□□ -0.1
TRAPPC9-208ENST00000520857 ANKLE2Q86XL3 938 aa14.45□□□□□ -0.1
TRAPPC9-208ENST00000520857 PAGE5Q96GU1 130 aa14.45□□□□□ -0.1
TRAPPC9-208ENST00000520857 CENPHQ9H3R5 247 aa14.45□□□□□ -0.1
TRAPPC9-208ENST00000520857 LRRC37A3O60309 1634 aa14.44□□□□□ -0.1
TRAPPC9-208ENST00000520857 GOLGA6BA6NDN3 693 aa14.44□□□□□ -0.1
TRAPPC9-208ENST00000520857 CYP27B1O15528 508 aa14.44□□□□□ -0.1
TRAPPC9-208ENST00000520857 KIAA0754O94854 1291 aa14.44□□□□□ -0.1
TRAPPC9-208ENST00000520857 IFNAR1P17181 557 aa14.44□□□□□ -0.1
TRAPPC9-208ENST00000520857 PHKA1P46020 1223 aa14.44□□□□□ -0.1
TRAPPC9-208ENST00000520857 COPB1P53618 953 aaKnown RBP14.44□□□□□ -0.1
TRAPPC9-208ENST00000520857 PAK1Q13153 545 aa14.44□□□□□ -0.1
TRAPPC9-208ENST00000520857 MSANTD4Q8NCY6 345 aa14.44□□□□□ -0.1
TRAPPC9-208ENST00000520857 NELFBQ8WX92 580 aa14.44□□□□□ -0.1
TRAPPC9-208ENST00000520857 DDX17Q92841 729 aaKnown RBP14.44□□□□□ -0.1
TRAPPC9-208ENST00000520857 ABHD10Q9NUJ1 306 aa14.44□□□□□ -0.1
TRAPPC9-208ENST00000520857 HEG1Q9ULI3 1381 aa14.44□□□□□ -0.1
TRAPPC9-208ENST00000520857 KCNJ18B7U540 433 aa14.44□□□□□ -0.1
TRAPPC9-208ENST00000520857 KRT86O43790 486 aa14.44□□□□□ -0.1
TRAPPC9-208ENST00000520857 ZEB2O60315 1214 aa14.44□□□□□ -0.1
TRAPPC9-208ENST00000520857 PPFIA4O75335 1185 aa14.44□□□□□ -0.1
TRAPPC9-208ENST00000520857 CIAO1O76071 339 aa14.44□□□□□ -0.1
TRAPPC9-208ENST00000520857 ITGA6P23229 1130 aa14.44□□□□□ -0.1
TRAPPC9-208ENST00000520857 KCNJ12Q14500 433 aa14.44□□□□□ -0.1
TRAPPC9-208ENST00000520857 IFNL3Q8IZI9 196 aa14.44□□□□□ -0.1
TRAPPC9-208ENST00000520857 CCDC51Q96ER9 411 aa14.44□□□□□ -0.1
TRAPPC9-208ENST00000520857 FAM107BQ9H098 131 aa14.44□□□□□ -0.1
TRAPPC9-208ENST00000520857 CNNM2Q9H8M5 875 aa14.44□□□□□ -0.1
TRAPPC9-208ENST00000520857 PRKAB2O43741 272 aa14.44□□□□□ -0.1
TRAPPC9-208ENST00000520857 CKAP4Q07065 602 aaKnown RBP14.44□□□□□ -0.1
TRAPPC9-208ENST00000520857 AKNAD1Q5T1N1 836 aa14.44□□□□□ -0.1
TRAPPC9-208ENST00000520857 PACS2Q86VP3 889 aa14.44□□□□□ -0.1
TRAPPC9-208ENST00000520857 IQUBQ8NA54 791 aa14.44□□□□□ -0.1
TRAPPC9-208ENST00000520857 BCAS4Q8TDM0 211 aa14.44□□□□□ -0.1
TRAPPC9-208ENST00000520857 NALCNQ8IZF0 1738 aa14.43□□□□□ -0.1
TRAPPC9-208ENST00000520857 ACTN4O43707 911 aaKnown RBP14.43□□□□□ -0.1
TRAPPC9-208ENST00000520857 KRT2P35908 639 aa14.43□□□□□ -0.1
TRAPPC9-208ENST00000520857 ERVK-24P63145 666 aa14.43□□□□□ -0.1
TRAPPC9-208ENST00000520857 MDM2Q00987 491 aaPredicted RBP14.43□□□□□ -0.1
TRAPPC9-208ENST00000520857 CCDC96Q2M329 555 aa14.43□□□□□ -0.1
TRAPPC9-208ENST00000520857 IGDCC4Q8TDY8 1250 aa14.43□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms