RNA–Protein interactions for RNA: ENST00000520520.1

CTNNA1-223, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 484 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-223ENST00000520520 ITGA6P23229 1130 aa9.99□□□□□ -0.81
CTNNA1-223ENST00000520520 RFX5P48382 616 aaPredicted RBP9.99□□□□□ -0.81
CTNNA1-223ENST00000520520 UTP14CQ5TAP6 766 aaKnown RBP9.99□□□□□ -0.81
CTNNA1-223ENST00000520520 STRIP1Q5VSL9 837 aa9.99□□□□□ -0.81
CTNNA1-223ENST00000520520 ZSCAN25Q6NSZ9 544 aa9.99□□□□□ -0.81
CTNNA1-223ENST00000520520 CCDC186Q7Z3E2 898 aa9.99□□□□□ -0.81
CTNNA1-223ENST00000520520 CKAP2LQ8IYA6 745 aa9.99□□□□□ -0.81
CTNNA1-223ENST00000520520 CCDC112Q8NEF3 446 aa9.99□□□□□ -0.81
CTNNA1-223ENST00000520520 HELBQ8NG08 1087 aaPredicted RBP9.99□□□□□ -0.81
CTNNA1-223ENST00000520520 KCNG4Q8TDN1 519 aa9.99□□□□□ -0.81
CTNNA1-223ENST00000520520 DCBLD2Q96PD2 775 aa9.99□□□□□ -0.81
CTNNA1-223ENST00000520520 FEZ1Q99689 392 aa9.99□□□□□ -0.81
CTNNA1-223ENST00000520520 COA1Q9GZY4 146 aa9.99□□□□□ -0.81
CTNNA1-223ENST00000520520 PAG1Q9NWQ8 432 aa9.99□□□□□ -0.81
CTNNA1-223ENST00000520520 RCOR1Q9UKL0 485 aa9.99□□□□□ -0.81
CTNNA1-223ENST00000520520 PYCARDQ9ULZ3 195 aa9.99□□□□□ -0.81
CTNNA1-223ENST00000520520 PCDHAC2Q9Y5I4 1007 aa9.99□□□□□ -0.81
CTNNA1-223ENST00000520520 ZNF804BA4D1E1 1349 aa9.99□□□□□ -0.81
CTNNA1-223ENST00000520520 WDR19Q8NEZ3 1342 aa9.99□□□□□ -0.81
CTNNA1-223ENST00000520520 A0A1W2PQ27 194 aa9.98□□□□□ -0.81
CTNNA1-223ENST00000520520 A0A1W2PQ64 194 aa9.98□□□□□ -0.81
CTNNA1-223ENST00000520520 A0A1W2PQD8 194 aa9.98□□□□□ -0.81
CTNNA1-223ENST00000520520 CLRN2A0PK11 232 aa9.98□□□□□ -0.81
CTNNA1-223ENST00000520520 CTIFO43310 598 aaKnown RBP9.98□□□□□ -0.81
CTNNA1-223ENST00000520520 FKTNO75072 461 aa9.98□□□□□ -0.81
CTNNA1-223ENST00000520520 NR1I2O75469 434 aa9.98□□□□□ -0.81
CTNNA1-223ENST00000520520 CYP21A2P08686 494 aa9.98□□□□□ -0.81
CTNNA1-223ENST00000520520 RBM5P52756 815 aaKnown RBP eCLIP9.98□□□□□ -0.81
CTNNA1-223ENST00000520520 SREBF2Q12772 1141 aa9.98□□□□□ -0.81
CTNNA1-223ENST00000520520 TPD52L1Q16890 204 aaPredicted RBP9.98□□□□□ -0.81
CTNNA1-223ENST00000520520 BRAPQ7Z569 592 aa9.98□□□□□ -0.81
CTNNA1-223ENST00000520520 APOBEC3FQ8IUX4 373 aaKnown RBP9.98□□□□□ -0.81
CTNNA1-223ENST00000520520 CCAR1Q8IX12 1150 aaKnown RBP9.98□□□□□ -0.81
CTNNA1-223ENST00000520520 FBXL16Q8N461 479 aa9.98□□□□□ -0.81
CTNNA1-223ENST00000520520 CCDC150Q8NCX0 1101 aa9.98□□□□□ -0.81
CTNNA1-223ENST00000520520 NSUN7Q8NE18 718 aaKnown RBP9.98□□□□□ -0.81
CTNNA1-223ENST00000520520 MRPS27Q92552 414 aaKnown RBP9.98□□□□□ -0.81
CTNNA1-223ENST00000520520 BPIFA3Q9BQP9 254 aa9.98□□□□□ -0.81
CTNNA1-223ENST00000520520 AGXT2Q9BYV1 514 aa9.98□□□□□ -0.81
CTNNA1-223ENST00000520520 GTPBP4Q9BZE4 634 aaKnown RBP9.98□□□□□ -0.81
CTNNA1-223ENST00000520520 DNAJC25Q9H1X3 360 aa9.98□□□□□ -0.81
CTNNA1-223ENST00000520520 VEZTQ9HBM0 779 aa9.98□□□□□ -0.81
CTNNA1-223ENST00000520520 IMPACTQ9P2X3 320 aa9.98□□□□□ -0.81
CTNNA1-223ENST00000520520 TFIP11Q9UBB9 837 aaKnown RBP9.98□□□□□ -0.81
CTNNA1-223ENST00000520520 MYO3BQ8WXR4 1341 aa9.98□□□□□ -0.81
CTNNA1-223ENST00000520520 ZNF646O15015 1829 aaPredicted RBP9.98□□□□□ -0.81
CTNNA1-223ENST00000520520 CENPFP49454 3210 aa9.97□□□□□ -0.81
CTNNA1-223ENST00000520520 JAK2O60674 1132 aa9.97□□□□□ -0.81
CTNNA1-223ENST00000520520 PPP1R37O75864 691 aa9.97□□□□□ -0.81
CTNNA1-223ENST00000520520 CDKL5O76039 1030 aa9.97□□□□□ -0.81
CTNNA1-223ENST00000520520 YEATS4O95619 227 aa9.97□□□□□ -0.81
CTNNA1-223ENST00000520520 ME1P48163 572 aa9.97□□□□□ -0.81
CTNNA1-223ENST00000520520 TM4SF4P48230 202 aa9.97□□□□□ -0.81
CTNNA1-223ENST00000520520 CHRNDQ07001 517 aa9.97□□□□□ -0.81
CTNNA1-223ENST00000520520 SCRN1Q12765 414 aa9.97□□□□□ -0.81
CTNNA1-223ENST00000520520 DLGAP5Q15398 846 aa9.97□□□□□ -0.81
CTNNA1-223ENST00000520520 SF3A1Q15459 793 aaKnown RBP9.97□□□□□ -0.81
CTNNA1-223ENST00000520520 PKN2Q16513 984 aaKnown RBP9.97□□□□□ -0.81
CTNNA1-223ENST00000520520 ZMYM1Q5SVZ6 1142 aa9.97□□□□□ -0.81
CTNNA1-223ENST00000520520 PRPF38BQ5VTL8 546 aaKnown RBP9.97□□□□□ -0.81
CTNNA1-223ENST00000520520 ANKRD7Q92527 254 aa9.97□□□□□ -0.81
CTNNA1-223ENST00000520520 SLC10A4Q96EP9 437 aa9.97□□□□□ -0.81
CTNNA1-223ENST00000520520 CLMNQ96JQ2 1002 aa9.97□□□□□ -0.81
CTNNA1-223ENST00000520520 TCEANC2Q96MN5 208 aa9.97□□□□□ -0.81
CTNNA1-223ENST00000520520 DBNDD2Q9BQY9 259 aa9.97□□□□□ -0.81
CTNNA1-223ENST00000520520 AKAP2Q9Y2D5 859 aa9.97□□□□□ -0.81
CTNNA1-223ENST00000520520 LEMD3Q9Y2U8 911 aa9.97□□□□□ -0.81
CTNNA1-223ENST00000520520 TRIM17Q9Y577 477 aa9.97□□□□□ -0.81
CTNNA1-223ENST00000520520 RNF113AO15541 343 aaKnown RBP9.96□□□□□ -0.82
CTNNA1-223ENST00000520520 AP5Z1O43299 807 aa9.96□□□□□ -0.82
CTNNA1-223ENST00000520520 MYO1BO43795 1136 aa9.96□□□□□ -0.82
CTNNA1-223ENST00000520520 IFIT1P09914 478 aaKnown RBP9.96□□□□□ -0.82
CTNNA1-223ENST00000520520 TNNT1P13805 278 aa9.96□□□□□ -0.82
CTNNA1-223ENST00000520520 KCNJ6P48051 423 aa9.96□□□□□ -0.82
CTNNA1-223ENST00000520520 IRX5P78411 483 aaPredicted RBP9.96□□□□□ -0.82
CTNNA1-223ENST00000520520 IMMTQ16891 758 aaKnown RBP9.96□□□□□ -0.82
CTNNA1-223ENST00000520520 CCDC158Q5M9N0 1113 aa9.96□□□□□ -0.82
CTNNA1-223ENST00000520520 SPRYD7Q5W111 196 aa9.96□□□□□ -0.82
CTNNA1-223ENST00000520520 FBXO46Q6PJ61 603 aaPredicted RBP9.96□□□□□ -0.82
CTNNA1-223ENST00000520520 CPLX2Q6PUV4 134 aaKnown RBP9.96□□□□□ -0.82
CTNNA1-223ENST00000520520 RALYLQ86SE5 291 aaKnown RBP9.96□□□□□ -0.82
CTNNA1-223ENST00000520520 FSIP1Q8NA03 581 aa9.96□□□□□ -0.82
CTNNA1-223ENST00000520520 DDX11Q96FC9 970 aa9.96□□□□□ -0.82
CTNNA1-223ENST00000520520 PGBD1Q96JS3 809 aa9.96□□□□□ -0.82
CTNNA1-223ENST00000520520 ANKRD2Q9GZV1 360 aa9.96□□□□□ -0.82
CTNNA1-223ENST00000520520 DEFB129Q9H1M3 183 aa9.96□□□□□ -0.82
CTNNA1-223ENST00000520520 KCND1Q9NSA2 647 aa9.96□□□□□ -0.82
CTNNA1-223ENST00000520520 SALL1Q9NSC2 1324 aa9.96□□□□□ -0.82
CTNNA1-223ENST00000520520 ANKRD18BA2A2Z9 1011 aa9.95□□□□□ -0.82
CTNNA1-223ENST00000520520 E7EWF7 191 aa9.95□□□□□ -0.82
CTNNA1-223ENST00000520520 H7C1W4 665 aa9.95□□□□□ -0.82
CTNNA1-223ENST00000520520 EYA2O00167 538 aa9.95□□□□□ -0.82
CTNNA1-223ENST00000520520 GOLIM4O00461 696 aa9.95□□□□□ -0.82
CTNNA1-223ENST00000520520 CBFA2T2O43439 604 aa9.95□□□□□ -0.82
CTNNA1-223ENST00000520520 STK38Q15208 465 aa9.95□□□□□ -0.82
CTNNA1-223ENST00000520520 CFAP100Q494V2 611 aa9.95□□□□□ -0.82
CTNNA1-223ENST00000520520 EPHA10Q5JZY3 1008 aa9.95□□□□□ -0.82
CTNNA1-223ENST00000520520 PPP4R3BQ5MIZ7 849 aa9.95□□□□□ -0.82
CTNNA1-223ENST00000520520 GORABQ5T7V8 394 aa9.95□□□□□ -0.82
CTNNA1-223ENST00000520520 CEP135Q66GS9 1140 aa9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms