RNA–Protein interactions for RNA: ENST00000520142.1

PABPC1-214, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 3

Gene PABPC1, Length 754 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-214ENST00000520142 FOXD4L1Q9NU39 408 aa13.31□□□□□ -0.28
PABPC1-214ENST00000520142 A0A1W2PRG0 241 aa13.3□□□□□ -0.28
PABPC1-214ENST00000520142 AKR1B1P15121 316 aa13.3□□□□□ -0.28
PABPC1-214ENST00000520142 GSPT1P15170 499 aaKnown RBP13.3□□□□□ -0.28
PABPC1-214ENST00000520142 SDSP20132 328 aa13.3□□□□□ -0.28
PABPC1-214ENST00000520142 LACTBP83111 547 aaPredicted RBP13.3□□□□□ -0.28
PABPC1-214ENST00000520142 SEPT2Q15019 361 aa13.3□□□□□ -0.28
PABPC1-214ENST00000520142 VPS53Q5VIR6 699 aa13.3□□□□□ -0.28
PABPC1-214ENST00000520142 CCDC17Q96LX7 622 aa13.3□□□□□ -0.28
PABPC1-214ENST00000520142 CABP5Q9NP86 173 aa13.3□□□□□ -0.28
PABPC1-214ENST00000520142 CPA4Q9UI42 421 aa13.3□□□□□ -0.28
PABPC1-214ENST00000520142 GREB1LQ9C091 1923 aaPredicted RBP13.3□□□□□ -0.28
PABPC1-214ENST00000520142 RASA1P20936 1047 aa13.29□□□□□ -0.28
PABPC1-214ENST00000520142 NMIQ13287 307 aaPredicted RBP13.29□□□□□ -0.28
PABPC1-214ENST00000520142 RAB3GAP1Q15042 981 aa13.29□□□□□ -0.28
PABPC1-214ENST00000520142 ALX1Q15699 326 aa13.29□□□□□ -0.28
PABPC1-214ENST00000520142 MCMDC2Q4G0Z9 681 aa13.29□□□□□ -0.28
PABPC1-214ENST00000520142 FBXO46Q6PJ61 603 aaPredicted RBP13.29□□□□□ -0.28
PABPC1-214ENST00000520142 USP17L2Q6R6M4 530 aa13.29□□□□□ -0.28
PABPC1-214ENST00000520142 POTEEQ6S8J3 1075 aa13.29□□□□□ -0.28
PABPC1-214ENST00000520142 TMEM179Q6ZVK1 233 aa13.29□□□□□ -0.28
PABPC1-214ENST00000520142 AMOTL1Q8IY63 956 aa13.29□□□□□ -0.28
PABPC1-214ENST00000520142 ZSWIM8A7E2V4 1837 aa13.28□□□□□ -0.28
PABPC1-214ENST00000520142 TRIM6-TRIM34B2RNG4 842 aa13.28□□□□□ -0.28
PABPC1-214ENST00000520142 RGS19P49795 217 aa13.28□□□□□ -0.28
PABPC1-214ENST00000520142 TTC22Q5TAA0 569 aa13.28□□□□□ -0.28
PABPC1-214ENST00000520142 ZNF589Q86UQ0 364 aaPredicted RBP13.28□□□□□ -0.28
PABPC1-214ENST00000520142 RILPL2Q969X0 211 aa13.28□□□□□ -0.28
PABPC1-214ENST00000520142 ARHGAP39Q9C0H5 1083 aa13.28□□□□□ -0.28
PABPC1-214ENST00000520142 ASCC2Q9H1I8 757 aaPredicted RBP13.28□□□□□ -0.28
PABPC1-214ENST00000520142 RTN4Q9NQC3 1192 aaKnown RBP13.28□□□□□ -0.28
PABPC1-214ENST00000520142 PTPN22Q9Y2R2 807 aa13.28□□□□□ -0.28
PABPC1-214ENST00000520142 IGKV6D-41A0A0C4DH26 115 aa13.27□□□□□ -0.29
PABPC1-214ENST00000520142 MINDY4BA8MYZ0 360 aa13.27□□□□□ -0.29
PABPC1-214ENST00000520142 FGRP09769 529 aa13.27□□□□□ -0.29
PABPC1-214ENST00000520142 TDO2P48775 406 aa13.27□□□□□ -0.29
PABPC1-214ENST00000520142 PABPC4Q13310 644 aaKnown RBP eCLIP13.27□□□□□ -0.291e-323■■■■■ 55.4
PABPC1-214ENST00000520142 CLEC10AQ8IUN9 316 aa13.27□□□□□ -0.29
PABPC1-214ENST00000520142 NACAP1Q9BZK3 213 aa13.27□□□□□ -0.29
PABPC1-214ENST00000520142 EFCC1Q9HA90 598 aa13.27□□□□□ -0.29
PABPC1-214ENST00000520142 TMOD4Q9NZQ9 345 aa13.27□□□□□ -0.29
PABPC1-214ENST00000520142 ANAPC4Q9UJX5 808 aa13.27□□□□□ -0.29
PABPC1-214ENST00000520142 PNMA3Q9UL41 463 aa13.27□□□□□ -0.29
PABPC1-214ENST00000520142 HPS5Q9UPZ3 1129 aa13.27□□□□□ -0.29
PABPC1-214ENST00000520142 TMX2Q9Y320 296 aa13.27□□□□□ -0.29
PABPC1-214ENST00000520142 TRIM17Q9Y577 477 aa13.27□□□□□ -0.29
PABPC1-214ENST00000520142 TACC3Q9Y6A5 838 aa13.27□□□□□ -0.29
PABPC1-214ENST00000520142 ZMYM6O95789 1325 aa13.27□□□□□ -0.29
PABPC1-214ENST00000520142 MYH8P13535 1937 aa13.27□□□□□ -0.29
PABPC1-214ENST00000520142 CCDC85CA6NKD9 419 aa13.26□□□□□ -0.29
PABPC1-214ENST00000520142 GNRH1P01148 92 aa13.26□□□□□ -0.29
PABPC1-214ENST00000520142 APPP05067 770 aa13.26□□□□□ -0.29
PABPC1-214ENST00000520142 HSPD1P10809 573 aaKnown RBP13.26□□□□□ -0.29
PABPC1-214ENST00000520142 VCAM1P19320 739 aa13.26□□□□□ -0.29
PABPC1-214ENST00000520142 GCLCP48506 637 aaPredicted RBP13.26□□□□□ -0.29
PABPC1-214ENST00000520142 USP14P54578 494 aa13.26□□□□□ -0.29
PABPC1-214ENST00000520142 PPARAQ07869 468 aa13.26□□□□□ -0.29
PABPC1-214ENST00000520142 FAM110CQ1W6H9 321 aa13.26□□□□□ -0.29
PABPC1-214ENST00000520142 KIAA1755Q5JYT7 1200 aa13.26□□□□□ -0.29
PABPC1-214ENST00000520142 TRIM47Q96LD4 638 aa13.26□□□□□ -0.29
PABPC1-214ENST00000520142 P2RX7Q99572 595 aaKnown RBP13.26□□□□□ -0.29
PABPC1-214ENST00000520142 NAPBQ9H115 298 aa13.26□□□□□ -0.29
PABPC1-214ENST00000520142 MORF4L1Q9UBU8 362 aa13.26□□□□□ -0.29
PABPC1-214ENST00000520142 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.26□□□□□ -0.29
PABPC1-214ENST00000520142 CCDC171Q6TFL3 1326 aa13.25□□□□□ -0.29
PABPC1-214ENST00000520142 MPHOSPH10O00566 681 aaKnown RBP13.25□□□□□ -0.29
PABPC1-214ENST00000520142 FGAP02671 866 aa13.25□□□□□ -0.29
PABPC1-214ENST00000520142 OSBPP22059 807 aa13.25□□□□□ -0.29
PABPC1-214ENST00000520142 LBX2Q6XYB7 198 aa13.25□□□□□ -0.29
PABPC1-214ENST00000520142 CATSPERGQ6ZRH7 1159 aa13.25□□□□□ -0.29
PABPC1-214ENST00000520142 IL25Q9H293 177 aa13.25□□□□□ -0.29
PABPC1-214ENST00000520142 KANSL2Q9H9L4 492 aa13.25□□□□□ -0.29
PABPC1-214ENST00000520142 TXNRD2Q9NNW7 524 aa13.25□□□□□ -0.29
PABPC1-214ENST00000520142 RBPJLQ9UBG7 517 aa13.25□□□□□ -0.29
PABPC1-214ENST00000520142 PLIN4Q96Q06 1357 aa13.24□□□□□ -0.29
PABPC1-214ENST00000520142 RLFQ13129 1914 aa13.24□□□□□ -0.29
PABPC1-214ENST00000520142 USP17L15C9J2P7 530 aa13.24□□□□□ -0.29
PABPC1-214ENST00000520142 USP17L13C9JLJ4 530 aa13.24□□□□□ -0.29
PABPC1-214ENST00000520142 USP17L11C9JVI0 530 aa13.24□□□□□ -0.29
PABPC1-214ENST00000520142 USP17L18D6R9N7 530 aa13.24□□□□□ -0.29
PABPC1-214ENST00000520142 USP17L22D6RA61 530 aa13.24□□□□□ -0.29
PABPC1-214ENST00000520142 USP17L17D6RBQ6 530 aa13.24□□□□□ -0.29
PABPC1-214ENST00000520142 USP17L19D6RCP7 530 aa13.24□□□□□ -0.29
PABPC1-214ENST00000520142 USP17L20D6RJB6 530 aa13.24□□□□□ -0.29
PABPC1-214ENST00000520142 HIP1O00291 1037 aa13.24□□□□□ -0.29
PABPC1-214ENST00000520142 PRDM1O75626 825 aa13.24□□□□□ -0.29
PABPC1-214ENST00000520142 EEF2P13639 858 aaKnown RBP13.24□□□□□ -0.29
PABPC1-214ENST00000520142 PSMC4P43686 418 aa13.24□□□□□ -0.29
PABPC1-214ENST00000520142 PRMT2P55345 433 aa13.24□□□□□ -0.29
PABPC1-214ENST00000520142 HERVK_113P62684 666 aa13.24□□□□□ -0.29
PABPC1-214ENST00000520142 ICA1Q05084 483 aa13.24□□□□□ -0.29
PABPC1-214ENST00000520142 USP17L24Q0WX57 530 aa13.24□□□□□ -0.29
PABPC1-214ENST00000520142 ARHGEF6Q15052 776 aa13.24□□□□□ -0.29
PABPC1-214ENST00000520142 ZYXQ15942 572 aaKnown RBP13.24□□□□□ -0.29
PABPC1-214ENST00000520142 ANKRD13CQ8N6S4 541 aa13.24□□□□□ -0.29
PABPC1-214ENST00000520142 SMCR8Q8TEV9 937 aaPredicted RBP13.24□□□□□ -0.29
PABPC1-214ENST00000520142 FEZ1Q99689 392 aa13.24□□□□□ -0.29
PABPC1-214ENST00000520142 NBPF3Q9H094 633 aa13.24□□□□□ -0.29
PABPC1-214ENST00000520142 EIF5BO60841 1220 aaKnown RBP13.23□□□□□ -0.29
PABPC1-214ENST00000520142 NOVP48745 357 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms