RNA–Protein interactions for RNA: ENST00000519643.5

SH3PXD2B-203, Transcript of SH3 and PX domains 2B, humanhuman

TSL 1 (best) BASIC

Gene SH3PXD2B, Length 1,394 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3PXD2B-203ENST00000519643 NAP1L2Q9ULW6 460 aaPredicted RBP17.7■□□□□ 0.42
SH3PXD2B-203ENST00000519643 HTTP42858 3142 aa17.7■□□□□ 0.42
SH3PXD2B-203ENST00000519643 GOLGA8BA8MQT2 603 aa17.69■□□□□ 0.42
SH3PXD2B-203ENST00000519643 NPM3O75607 178 aaKnown RBP17.69■□□□□ 0.42
SH3PXD2B-203ENST00000519643 NUCB2P80303 420 aa17.69■□□□□ 0.42
SH3PXD2B-203ENST00000519643 SCRN1Q12765 414 aa17.69■□□□□ 0.42
SH3PXD2B-203ENST00000519643 MKRN3Q13064 507 aaKnown RBP17.69■□□□□ 0.42
SH3PXD2B-203ENST00000519643 RAB3GAP1Q15042 981 aa17.69■□□□□ 0.42
SH3PXD2B-203ENST00000519643 FBXO46Q6PJ61 603 aaPredicted RBP17.69■□□□□ 0.42
SH3PXD2B-203ENST00000519643 OGFOD1Q8N543 542 aa17.69■□□□□ 0.42
SH3PXD2B-203ENST00000519643 CHMP4CQ96CF2 233 aa17.69■□□□□ 0.42
SH3PXD2B-203ENST00000519643 UBAC1Q9BSL1 405 aa17.69■□□□□ 0.42
SH3PXD2B-203ENST00000519643 IDI2Q9BXS1 227 aa17.69■□□□□ 0.42
SH3PXD2B-203ENST00000519643 ERICH2A1L162 156 aa17.68■□□□□ 0.42
SH3PXD2B-203ENST00000519643 WNT10BO00744 389 aa17.68■□□□□ 0.42
SH3PXD2B-203ENST00000519643 GJB2P29033 226 aa17.68■□□□□ 0.42
SH3PXD2B-203ENST00000519643 NFIAQ12857 509 aa17.68■□□□□ 0.42
SH3PXD2B-203ENST00000519643 WTAPQ15007 396 aa17.68■□□□□ 0.42
SH3PXD2B-203ENST00000519643 C16orf86Q6ZW13 317 aa17.68■□□□□ 0.42
SH3PXD2B-203ENST00000519643 TTC6Q86TZ1 520 aa17.68■□□□□ 0.42
SH3PXD2B-203ENST00000519643 PRMT6Q96LA8 375 aaPredicted RBP17.68■□□□□ 0.42
SH3PXD2B-203ENST00000519643 ZKSCAN3Q9BRR0 538 aa17.68■□□□□ 0.42
SH3PXD2B-203ENST00000519643 CFHR5Q9BXR6 569 aa17.68■□□□□ 0.42
SH3PXD2B-203ENST00000519643 ZNF287Q9HBT7 754 aa17.68■□□□□ 0.42
SH3PXD2B-203ENST00000519643 SENP2Q9HC62 589 aa17.68■□□□□ 0.42
SH3PXD2B-203ENST00000519643 TNKSO95271 1327 aa17.68■□□□□ 0.42
SH3PXD2B-203ENST00000519643 SPDYE2BA6NHP3 402 aa17.67■□□□□ 0.42
SH3PXD2B-203ENST00000519643 SPDYE6P0CI01 402 aa17.67■□□□□ 0.42
SH3PXD2B-203ENST00000519643 CCT2P78371 535 aaKnown RBP17.67■□□□□ 0.42
SH3PXD2B-203ENST00000519643 TTLL12Q14166 644 aaPredicted RBP17.67■□□□□ 0.42
SH3PXD2B-203ENST00000519643 DLGAP5Q15398 846 aa17.67■□□□□ 0.42
SH3PXD2B-203ENST00000519643 SEC23AQ15436 765 aa17.67■□□□□ 0.42
SH3PXD2B-203ENST00000519643 APOA5Q6Q788 366 aa17.67■□□□□ 0.42
SH3PXD2B-203ENST00000519643 NFXL1Q6ZNB6 911 aa17.67■□□□□ 0.42
SH3PXD2B-203ENST00000519643 IQCA1Q86XH1 822 aa17.67■□□□□ 0.42
SH3PXD2B-203ENST00000519643 TMTC2Q8N394 836 aa17.67■□□□□ 0.42
SH3PXD2B-203ENST00000519643 MTMR14Q8NCE2 650 aa17.67■□□□□ 0.42
SH3PXD2B-203ENST00000519643 ZSCAN10Q96SZ4 725 aaPredicted RBP17.67■□□□□ 0.42
SH3PXD2B-203ENST00000519643 LLPHQ9BRT6 129 aaKnown RBP17.67■□□□□ 0.42
SH3PXD2B-203ENST00000519643 TDRD3Q9H7E2 651 aaKnown RBP17.67■□□□□ 0.42
SH3PXD2B-203ENST00000519643 MKNK2Q9HBH9 465 aa17.67■□□□□ 0.42
SH3PXD2B-203ENST00000519643 FAM198AQ9UFP1 575 aa17.67■□□□□ 0.42
SH3PXD2B-203ENST00000519643 CCDC69A6NI79 296 aa17.66■□□□□ 0.42
SH3PXD2B-203ENST00000519643 CDK8P49336 464 aa17.66■□□□□ 0.42
SH3PXD2B-203ENST00000519643 MMP14P50281 582 aa17.66■□□□□ 0.42
SH3PXD2B-203ENST00000519643 CACNB3P54284 484 aa17.66■□□□□ 0.42
SH3PXD2B-203ENST00000519643 FAM47AQ5JRC9 791 aa17.66■□□□□ 0.42
SH3PXD2B-203ENST00000519643 SLC44A5Q8NCS7 719 aa17.66■□□□□ 0.42
SH3PXD2B-203ENST00000519643 NCOA5Q9HCD5 579 aaKnown RBP17.66■□□□□ 0.42
SH3PXD2B-203ENST00000519643 TSPY2A6NKD2 308 aa17.66■□□□□ 0.42
SH3PXD2B-203ENST00000519643 ZBTB43O43298 467 aa17.66■□□□□ 0.42
SH3PXD2B-203ENST00000519643 FKTNO75072 461 aa17.66■□□□□ 0.42
SH3PXD2B-203ENST00000519643 HLA-DOAP06340 250 aa17.66■□□□□ 0.42
SH3PXD2B-203ENST00000519643 RASA1P20936 1047 aa17.66■□□□□ 0.42
SH3PXD2B-203ENST00000519643 GABPAQ06546 454 aa17.66■□□□□ 0.42
SH3PXD2B-203ENST00000519643 PKP1Q13835 747 aa17.66■□□□□ 0.42
SH3PXD2B-203ENST00000519643 ENAHQ8N8S7 591 aaPredicted RBP17.66■□□□□ 0.42
SH3PXD2B-203ENST00000519643 SMARCC2Q8TAQ2 1214 aa17.66■□□□□ 0.42
SH3PXD2B-203ENST00000519643 COL2A1P02458 1487 aaPredicted RBP17.65■□□□□ 0.42
SH3PXD2B-203ENST00000519643 JAK2O60674 1132 aa17.65■□□□□ 0.42
SH3PXD2B-203ENST00000519643 DTNBO60941 627 aa17.65■□□□□ 0.42
SH3PXD2B-203ENST00000519643 ENTPD3O75355 529 aa17.65■□□□□ 0.42
SH3PXD2B-203ENST00000519643 TFAP4Q01664 338 aa17.65■□□□□ 0.42
SH3PXD2B-203ENST00000519643 SREBF2Q12772 1141 aa17.65■□□□□ 0.42
SH3PXD2B-203ENST00000519643 LDLRAD1Q5T700 205 aa17.65■□□□□ 0.42
SH3PXD2B-203ENST00000519643 SYNE3Q6ZMZ3 975 aa17.65■□□□□ 0.42
SH3PXD2B-203ENST00000519643 RAB11FIP4Q86YS3 637 aa17.65■□□□□ 0.42
SH3PXD2B-203ENST00000519643 ZFPM1Q8IX07 1006 aa17.65■□□□□ 0.42
SH3PXD2B-203ENST00000519643 ZNF444Q8N0Y2 327 aaPredicted RBP17.65■□□□□ 0.42
SH3PXD2B-203ENST00000519643 NSUN7Q8NE18 718 aaKnown RBP17.65■□□□□ 0.42
SH3PXD2B-203ENST00000519643 ZBED3Q96IU2 234 aaPredicted RBP17.65■□□□□ 0.42
SH3PXD2B-203ENST00000519643 DHX36Q9H2U1 1008 aaKnown RBP17.65■□□□□ 0.42
SH3PXD2B-203ENST00000519643 TMOD2Q9NZR1 351 aa17.65■□□□□ 0.42
SH3PXD2B-203ENST00000519643 ZDHHC9Q9Y397 364 aa17.65■□□□□ 0.42
SH3PXD2B-203ENST00000519643 SLC12A7Q9Y666 1083 aa17.65■□□□□ 0.42
SH3PXD2B-203ENST00000519643 NID2Q14112 1375 aa17.64■□□□□ 0.42
SH3PXD2B-203ENST00000519643 MKI67P46013 3256 aaKnown RBP17.64■□□□□ 0.41
SH3PXD2B-203ENST00000519643 SIPA1L1O43166 1804 aa17.64■□□□□ 0.41
SH3PXD2B-203ENST00000519643 DHX16O60231 1041 aaKnown RBP17.64■□□□□ 0.41
SH3PXD2B-203ENST00000519643 CTDNEP1O95476 244 aa17.64■□□□□ 0.41
SH3PXD2B-203ENST00000519643 BRD1O95696 1058 aa17.64■□□□□ 0.41
SH3PXD2B-203ENST00000519643 METAP2P50579 478 aaKnown RBP eCLIP17.64■□□□□ 0.41
SH3PXD2B-203ENST00000519643 RCAN1P53805 252 aa17.64■□□□□ 0.41
SH3PXD2B-203ENST00000519643 TCP10Q12799 353 aa17.64■□□□□ 0.41
SH3PXD2B-203ENST00000519643 PRKG1Q13976 671 aa17.64■□□□□ 0.41
SH3PXD2B-203ENST00000519643 SPRYD7Q5W111 196 aa17.64■□□□□ 0.41
SH3PXD2B-203ENST00000519643 TNPO1Q92973 898 aaKnown RBP17.64■□□□□ 0.41
SH3PXD2B-203ENST00000519643 EHD4Q9H223 541 aa17.64■□□□□ 0.41
SH3PXD2B-203ENST00000519643 ZNF70Q9UC06 446 aaPredicted RBP17.64■□□□□ 0.41
SH3PXD2B-203ENST00000519643 FZD1Q9UP38 647 aa17.64■□□□□ 0.41
SH3PXD2B-203ENST00000519643 MYH8P13535 1937 aa17.63■□□□□ 0.41
SH3PXD2B-203ENST00000519643 PTPDC1A2A3K4 754 aa17.63■□□□□ 0.41
SH3PXD2B-203ENST00000519643 GOLGA8AA7E2F4 631 aa17.63■□□□□ 0.41
SH3PXD2B-203ENST00000519643 SYT1P21579 422 aa17.63■□□□□ 0.41
SH3PXD2B-203ENST00000519643 NF2P35240 595 aa17.63■□□□□ 0.41
SH3PXD2B-203ENST00000519643 HMGN5P82970 282 aaKnown RBP17.63■□□□□ 0.41
SH3PXD2B-203ENST00000519643 SPDYE2Q495Y8 402 aa17.63■□□□□ 0.41
SH3PXD2B-203ENST00000519643 CCDC178Q5BJE1 867 aa17.63■□□□□ 0.41
SH3PXD2B-203ENST00000519643 IFIT1BQ5T764 474 aaKnown RBP17.63■□□□□ 0.41
SH3PXD2B-203ENST00000519643 MICU3Q86XE3 530 aa17.63■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms