RNA–Protein interactions for RNA: ENST00000519599.1

IGKV3D-25-201, Transcript of immunoglobulin kappa variable 3D-25 (pseudogene), humanhuman

BASIC

Gene IGKV3D-25, Length 235 nt, Biotype IG V pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGKV3D-25-201ENST00000519599 SLAIN1Q8ND83 568 aa7.46□□□□□ -1.22
IGKV3D-25-201ENST00000519599 PI4K2BQ8TCG2 481 aa7.46□□□□□ -1.22
IGKV3D-25-201ENST00000519599 SMCR8Q8TEV9 937 aaPredicted RBP7.46□□□□□ -1.22
IGKV3D-25-201ENST00000519599 TRIB2Q92519 343 aa7.46□□□□□ -1.22
IGKV3D-25-201ENST00000519599 DYNLL2Q96FJ2 89 aa7.46□□□□□ -1.22
IGKV3D-25-201ENST00000519599 NOL10Q9BSC4 688 aaKnown RBP7.46□□□□□ -1.22
IGKV3D-25-201ENST00000519599 GNL3Q9BVP2 549 aaKnown RBP eCLIP7.46□□□□□ -1.22
IGKV3D-25-201ENST00000519599 CRISPLD2Q9H0B8 497 aa7.46□□□□□ -1.22
IGKV3D-25-201ENST00000519599 AS3MTQ9HBK9 375 aa7.46□□□□□ -1.22
IGKV3D-25-201ENST00000519599 SZT2Q5T011 3432 aa7.46□□□□□ -1.22
IGKV3D-25-201ENST00000519599 LRRC37A2A6NM11 1700 aa7.45□□□□□ -1.22
IGKV3D-25-201ENST00000519599 TNPO2O14787 897 aaKnown RBP7.45□□□□□ -1.22
IGKV3D-25-201ENST00000519599 MBD4O95243 580 aa7.45□□□□□ -1.22
IGKV3D-25-201ENST00000519599 HLA-DOAP06340 250 aa7.45□□□□□ -1.22
IGKV3D-25-201ENST00000519599 IFIT2P09913 472 aaKnown RBP7.45□□□□□ -1.22
IGKV3D-25-201ENST00000519599 AKR1B1P15121 316 aa7.45□□□□□ -1.22
IGKV3D-25-201ENST00000519599 VCAM1P19320 739 aa7.45□□□□□ -1.22
IGKV3D-25-201ENST00000519599 ARHGEF6Q15052 776 aa7.45□□□□□ -1.22
IGKV3D-25-201ENST00000519599 UBE3CQ15386 1083 aa7.45□□□□□ -1.22
IGKV3D-25-201ENST00000519599 CERKLQ49MI3 558 aaPredicted RBP7.45□□□□□ -1.22
IGKV3D-25-201ENST00000519599 C12orf60Q5U649 245 aa7.45□□□□□ -1.22
IGKV3D-25-201ENST00000519599 LBX2Q6XYB7 198 aa7.45□□□□□ -1.22
IGKV3D-25-201ENST00000519599 CERS3Q8IU89 383 aa7.45□□□□□ -1.22
IGKV3D-25-201ENST00000519599 CRACR2BQ8N4Y2 399 aaPredicted RBP7.45□□□□□ -1.22
IGKV3D-25-201ENST00000519599 RAET1EQ8TD07 263 aa7.45□□□□□ -1.22
IGKV3D-25-201ENST00000519599 U2AF1L4Q8WU68 220 aaKnown RBP7.45□□□□□ -1.22
IGKV3D-25-201ENST00000519599 LRRCC1Q9C099 1032 aa7.45□□□□□ -1.22
IGKV3D-25-201ENST00000519599 KIAA1683Q9H0B3 1180 aa7.45□□□□□ -1.22
IGKV3D-25-201ENST00000519599 PRO3102Q9H379 93 aa7.45□□□□□ -1.22
IGKV3D-25-201ENST00000519599 EPB41L4AQ9HCS5 686 aaPredicted RBP7.45□□□□□ -1.22
IGKV3D-25-201ENST00000519599 BTBD7Q9P203 1132 aa7.45□□□□□ -1.22
IGKV3D-25-201ENST00000519599 PNMA3Q9UL41 463 aa7.45□□□□□ -1.22
IGKV3D-25-201ENST00000519599 ROBO3Q96MS0 1386 aa7.45□□□□□ -1.22
IGKV3D-25-201ENST00000519599 TRIOBPQ9H2D6 2365 aa7.45□□□□□ -1.22
IGKV3D-25-201ENST00000519599 SPDYE16A6NNV3 312 aaPredicted RBP7.44□□□□□ -1.22
IGKV3D-25-201ENST00000519599 M0R2C6 588 aa7.44□□□□□ -1.22
IGKV3D-25-201ENST00000519599 SGPL1O95470 568 aa7.44□□□□□ -1.22
IGKV3D-25-201ENST00000519599 HOXD10P28358 340 aa7.44□□□□□ -1.22
IGKV3D-25-201ENST00000519599 RRP1P56182 461 aaKnown RBP7.44□□□□□ -1.22
IGKV3D-25-201ENST00000519599 ERVK-9P63128 1117 aa7.44□□□□□ -1.22
IGKV3D-25-201ENST00000519599 ERVK-24P63145 666 aa7.44□□□□□ -1.22
IGKV3D-25-201ENST00000519599 CCL14Q16627 93 aa7.44□□□□□ -1.22
IGKV3D-25-201ENST00000519599 ABCB5Q2M3G0 1257 aa7.44□□□□□ -1.22
IGKV3D-25-201ENST00000519599 MORN1Q5T089 497 aa7.44□□□□□ -1.22
IGKV3D-25-201ENST00000519599 USP17L2Q6R6M4 530 aa7.44□□□□□ -1.22
IGKV3D-25-201ENST00000519599 CATSPERGQ6ZRH7 1159 aa7.44□□□□□ -1.22
IGKV3D-25-201ENST00000519599 TTC6Q86TZ1 520 aa7.44□□□□□ -1.22
IGKV3D-25-201ENST00000519599 OSBP2Q969R2 916 aa7.44□□□□□ -1.22
IGKV3D-25-201ENST00000519599 STRBPQ96SI9 672 aaKnown RBP7.44□□□□□ -1.22
IGKV3D-25-201ENST00000519599 TMEM106CQ9BVX2 250 aa7.44□□□□□ -1.22
IGKV3D-25-201ENST00000519599 CRNKL1Q9BZJ0 848 aaKnown RBP7.44□□□□□ -1.22
IGKV3D-25-201ENST00000519599 ECHDC1Q9NTX5 307 aa7.44□□□□□ -1.22
IGKV3D-25-201ENST00000519599 MCM9Q9NXL9 1143 aa7.44□□□□□ -1.22
IGKV3D-25-201ENST00000519599 PCDH10Q9P2E7 1040 aa7.44□□□□□ -1.22
IGKV3D-25-201ENST00000519599 GSG1L2A8MUP6 293 aa7.43□□□□□ -1.22
IGKV3D-25-201ENST00000519599 USP17L12C9JPN9 530 aa7.43□□□□□ -1.22
IGKV3D-25-201ENST00000519599 USP17L21D6R901 530 aa7.43□□□□□ -1.22
IGKV3D-25-201ENST00000519599 PABPC4Q13310 644 aaKnown RBP eCLIP7.43□□□□□ -1.22
IGKV3D-25-201ENST00000519599 RAB3GAP1Q15042 981 aa7.43□□□□□ -1.22
IGKV3D-25-201ENST00000519599 ZYXQ15942 572 aaKnown RBP7.43□□□□□ -1.22
IGKV3D-25-201ENST00000519599 CTR9Q6PD62 1173 aa7.43□□□□□ -1.22
IGKV3D-25-201ENST00000519599 C16orf86Q6ZW13 317 aa7.43□□□□□ -1.22
IGKV3D-25-201ENST00000519599 GPR142Q7Z601 462 aa7.43□□□□□ -1.22
IGKV3D-25-201ENST00000519599 KBTBD3Q8NAB2 608 aa7.43□□□□□ -1.22
IGKV3D-25-201ENST00000519599 DIS3LQ8TF46 1054 aaKnown RBP7.43□□□□□ -1.22
IGKV3D-25-201ENST00000519599 SEC62Q99442 399 aaKnown RBP7.43□□□□□ -1.22
IGKV3D-25-201ENST00000519599 XRN2Q9H0D6 950 aaKnown RBP eCLIP7.43□□□□□ -1.22
IGKV3D-25-201ENST00000519599 RNF208Q9H0X6 261 aa7.43□□□□□ -1.22
IGKV3D-25-201ENST00000519599 FLRT1Q9NZU1 646 aa7.43□□□□□ -1.22
IGKV3D-25-201ENST00000519599 TACC3Q9Y6A5 838 aa7.43□□□□□ -1.22
IGKV3D-25-201ENST00000519599 RANBP2P49792 3224 aaKnown RBP7.42□□□□□ -1.22
IGKV3D-25-201ENST00000519599 IGKV6D-41A0A0C4DH26 115 aa7.42□□□□□ -1.22
IGKV3D-25-201ENST00000519599 USP17L15C9J2P7 530 aa7.42□□□□□ -1.22
IGKV3D-25-201ENST00000519599 USP17L13C9JLJ4 530 aa7.42□□□□□ -1.22
IGKV3D-25-201ENST00000519599 USP17L11C9JVI0 530 aa7.42□□□□□ -1.22
IGKV3D-25-201ENST00000519599 USP17L18D6R9N7 530 aa7.42□□□□□ -1.22
IGKV3D-25-201ENST00000519599 USP17L22D6RA61 530 aa7.42□□□□□ -1.22
IGKV3D-25-201ENST00000519599 USP17L17D6RBQ6 530 aa7.42□□□□□ -1.22
IGKV3D-25-201ENST00000519599 USP17L19D6RCP7 530 aa7.42□□□□□ -1.22
IGKV3D-25-201ENST00000519599 USP17L20D6RJB6 530 aa7.42□□□□□ -1.22
IGKV3D-25-201ENST00000519599 H0YGN5 161 aa7.42□□□□□ -1.22
IGKV3D-25-201ENST00000519599 POLR3DP05423 398 aaPredicted RBP7.42□□□□□ -1.22
IGKV3D-25-201ENST00000519599 XRCC5P13010 732 aaKnown RBP7.42□□□□□ -1.22
IGKV3D-25-201ENST00000519599 CYP2B6P20813 491 aa7.42□□□□□ -1.22
IGKV3D-25-201ENST00000519599 CDK8P49336 464 aa7.42□□□□□ -1.22
IGKV3D-25-201ENST00000519599 UBXN2AP68543 259 aa7.42□□□□□ -1.22
IGKV3D-25-201ENST00000519599 IRX3P78415 501 aaPredicted RBP7.42□□□□□ -1.22
IGKV3D-25-201ENST00000519599 USP17L24Q0WX57 530 aa7.42□□□□□ -1.22
IGKV3D-25-201ENST00000519599 HABP4Q5JVS0 413 aaKnown RBP7.42□□□□□ -1.22
IGKV3D-25-201ENST00000519599 LHX8Q68G74 356 aa7.42□□□□□ -1.22
IGKV3D-25-201ENST00000519599 REPS2Q8NFH8 660 aa7.42□□□□□ -1.22
IGKV3D-25-201ENST00000519599 GPRC5AQ8NFJ5 357 aa7.42□□□□□ -1.22
IGKV3D-25-201ENST00000519599 NPLOC4Q8TAT6 608 aa7.42□□□□□ -1.22
IGKV3D-25-201ENST00000519599 COA7Q96BR5 231 aa7.42□□□□□ -1.22
IGKV3D-25-201ENST00000519599 DEFB118Q96PH6 123 aa7.42□□□□□ -1.22
IGKV3D-25-201ENST00000519599 CRBNQ96SW2 442 aa7.42□□□□□ -1.22
IGKV3D-25-201ENST00000519599 BCL11AQ9H165 835 aa7.42□□□□□ -1.22
IGKV3D-25-201ENST00000519599 RPAP3Q9H6T3 665 aaPredicted RBP7.42□□□□□ -1.22
IGKV3D-25-201ENST00000519599 ATP8A2Q9NTI2 1148 aa7.42□□□□□ -1.22
IGKV3D-25-201ENST00000519599 TMOD4Q9NZQ9 345 aa7.42□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms