RNA–Protein interactions for RNA: ENST00000519583.5

CLK4-203, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 3,462 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-203ENST00000519583 NACAP1Q9BZK3 213 aa9.32□□□□□ -0.92
CLK4-203ENST00000519583 BRPF3Q9ULD4 1205 aa9.32□□□□□ -0.92
CLK4-203ENST00000519583 KLF18A0A0U1RQI7 1052 aa9.31□□□□□ -0.92
CLK4-203ENST00000519583 PTPDC1A2A3K4 754 aa9.31□□□□□ -0.92
CLK4-203ENST00000519583 DNM1Q05193 864 aaKnown RBP9.31□□□□□ -0.92
CLK4-203ENST00000519583 LDLRAD1Q5T700 205 aa9.31□□□□□ -0.92
CLK4-203ENST00000519583 RAB11FIP4Q86YS3 637 aa9.31□□□□□ -0.92
CLK4-203ENST00000519583 CLMNQ96JQ2 1002 aa9.31□□□□□ -0.92
CLK4-203ENST00000519583 ATRNL1Q5VV63 1379 aa9.31□□□□□ -0.92
CLK4-203ENST00000519583 GOLGA8BA8MQT2 603 aa9.31□□□□□ -0.92
CLK4-203ENST00000519583 FIBPO43427 364 aa9.31□□□□□ -0.92
CLK4-203ENST00000519583 GADD45BO75293 160 aaPredicted RBP9.31□□□□□ -0.92
CLK4-203ENST00000519583 EVCP57679 992 aa9.31□□□□□ -0.92
CLK4-203ENST00000519583 MAP3K9P80192 1104 aa9.31□□□□□ -0.92
CLK4-203ENST00000519583 ANKRD13AQ8IZ07 590 aa9.31□□□□□ -0.92
CLK4-203ENST00000519583 FAM184AQ8NB25 1140 aa9.31□□□□□ -0.92
CLK4-203ENST00000519583 SLC10A4Q96EP9 437 aa9.31□□□□□ -0.92
CLK4-203ENST00000519583 DHX36Q9H2U1 1008 aaKnown RBP9.31□□□□□ -0.92
CLK4-203ENST00000519583 TACC3Q9Y6A5 838 aa9.31□□□□□ -0.92
CLK4-203ENST00000519583 WDR19Q8NEZ3 1342 aa9.31□□□□□ -0.92
CLK4-203ENST00000519583 FAM196BA6NMK8 535 aa9.3□□□□□ -0.92
CLK4-203ENST00000519583 HLA-DOAP06340 250 aa9.3□□□□□ -0.92
CLK4-203ENST00000519583 FOSBP53539 338 aa9.3□□□□□ -0.92
CLK4-203ENST00000519583 L1TD1Q5T7N2 865 aaKnown RBP9.3□□□□□ -0.92
CLK4-203ENST00000519583 GAS2L3Q86XJ1 694 aa9.3□□□□□ -0.92
CLK4-203ENST00000519583 TRIM34Q9BYJ4 488 aa9.3□□□□□ -0.92
CLK4-203ENST00000519583 MCM9Q9NXL9 1143 aa9.3□□□□□ -0.92
CLK4-203ENST00000519583 PI4KBQ9UBF8 816 aa9.3□□□□□ -0.92
CLK4-203ENST00000519583 CSADQ9Y600 493 aa9.3□□□□□ -0.92
CLK4-203ENST00000519583 CEP350Q5VT06 3117 aa9.3□□□□□ -0.92
CLK4-203ENST00000519583 AOC2O75106 756 aa9.3□□□□□ -0.92
CLK4-203ENST00000519583 MBD3O95983 291 aa9.3□□□□□ -0.92
CLK4-203ENST00000519583 POLR3DP05423 398 aaPredicted RBP9.3□□□□□ -0.92
CLK4-203ENST00000519583 PDIA4P13667 645 aaKnown RBP9.3□□□□□ -0.92
CLK4-203ENST00000519583 MKRN3Q13064 507 aaKnown RBP9.3□□□□□ -0.92
CLK4-203ENST00000519583 FAM173BQ6P4H8 233 aa9.3□□□□□ -0.92
CLK4-203ENST00000519583 RASAL3Q86YV0 1011 aa9.3□□□□□ -0.92
CLK4-203ENST00000519583 STK11IPQ8N1F8 1099 aa9.3□□□□□ -0.92
CLK4-203ENST00000519583 TMEM87AQ8NBN3 555 aa9.3□□□□□ -0.92
CLK4-203ENST00000519583 DDX55Q8NHQ9 600 aaKnown RBP eCLIP9.3□□□□□ -0.92
CLK4-203ENST00000519583 ZKSCAN4Q969J2 545 aaPredicted RBP9.3□□□□□ -0.92
CLK4-203ENST00000519583 CCDC102AQ96A19 550 aa9.3□□□□□ -0.92
CLK4-203ENST00000519583 ELP3Q9H9T3 547 aa9.3□□□□□ -0.92
CLK4-203ENST00000519583 XPO5Q9HAV4 1204 aaKnown RBP eCLIP9.3□□□□□ -0.92
CLK4-203ENST00000519583 DCP1AQ9NPI6 582 aaPredicted RBP9.3□□□□□ -0.92
CLK4-203ENST00000519583 COL2A1P02458 1487 aaPredicted RBP9.3□□□□□ -0.92
CLK4-203ENST00000519583 CDK5RAP2Q96SN8 1893 aa9.3□□□□□ -0.92
CLK4-203ENST00000519583 INPP5BP32019 993 aa9.3□□□□□ -0.92
CLK4-203ENST00000519583 VGLL4Q14135 290 aa9.3□□□□□ -0.92
CLK4-203ENST00000519583 ZSCAN23Q3MJ62 389 aa9.3□□□□□ -0.92
CLK4-203ENST00000519583 TPRNQ4KMQ1 711 aa9.3□□□□□ -0.92
CLK4-203ENST00000519583 PPP1R3FQ6ZSY5 799 aaPredicted RBP9.3□□□□□ -0.92
CLK4-203ENST00000519583 CRACR2BQ8N4Y2 399 aaPredicted RBP9.3□□□□□ -0.92
CLK4-203ENST00000519583 HPS5Q9UPZ3 1129 aa9.3□□□□□ -0.92
CLK4-203ENST00000519583 SH2B2O14492 632 aaPredicted RBP9.29□□□□□ -0.92
CLK4-203ENST00000519583 SLC10A3P09131 477 aa9.29□□□□□ -0.92
CLK4-203ENST00000519583 HMGN5P82970 282 aaKnown RBP9.29□□□□□ -0.92
CLK4-203ENST00000519583 AKNAD1Q5T1N1 836 aa9.29□□□□□ -0.92
CLK4-203ENST00000519583 ATP8A2Q9NTI2 1148 aa9.29□□□□□ -0.92
CLK4-203ENST00000519583 TMEM63CQ9P1W3 806 aa9.29□□□□□ -0.92
CLK4-203ENST00000519583 H3BQV1 296 aa9.29□□□□□ -0.92
CLK4-203ENST00000519583 KDM4AO75164 1064 aa9.29□□□□□ -0.92
CLK4-203ENST00000519583 RRP12Q5JTH9 1297 aaKnown RBP9.29□□□□□ -0.92
CLK4-203ENST00000519583 IFFO2Q5TF58 517 aa9.29□□□□□ -0.92
CLK4-203ENST00000519583 TTC6Q86TZ1 520 aa9.29□□□□□ -0.92
CLK4-203ENST00000519583 SENP2Q9HC62 589 aa9.29□□□□□ -0.92
CLK4-203ENST00000519583 NOGQ13253 232 aa9.29□□□□□ -0.92
CLK4-203ENST00000519583 MFSD6Q6ZSS7 791 aa9.29□□□□□ -0.92
CLK4-203ENST00000519583 TOMM22Q9NS69 142 aa9.29□□□□□ -0.92
CLK4-203ENST00000519583 FOCADQ5VW36 1801 aa9.28□□□□□ -0.92
CLK4-203ENST00000519583 UNCXA6NJT0 531 aa9.28□□□□□ -0.92
CLK4-203ENST00000519583 MINDY4BA8MYZ0 360 aa9.28□□□□□ -0.92
CLK4-203ENST00000519583 FAM155AB1AL88 458 aaPredicted RBP9.28□□□□□ -0.92
CLK4-203ENST00000519583 SMIM22K7EJ46 135 aa9.28□□□□□ -0.92
CLK4-203ENST00000519583 TBC1D12O60347 775 aa9.28□□□□□ -0.92
CLK4-203ENST00000519583 CYP2D6P10635 497 aa9.28□□□□□ -0.92
CLK4-203ENST00000519583 PLCD1P51178 756 aa9.28□□□□□ -0.92
CLK4-203ENST00000519583 MAP3K10Q02779 954 aa9.28□□□□□ -0.92
CLK4-203ENST00000519583 PPARAQ07869 468 aa9.28□□□□□ -0.92
CLK4-203ENST00000519583 FOXP4Q8IVH2 680 aaPredicted RBP9.28□□□□□ -0.92
CLK4-203ENST00000519583 STAG1Q8WVM7 1258 aa9.28□□□□□ -0.92
CLK4-203ENST00000519583 ZIC5Q96T25 663 aa9.28□□□□□ -0.92
CLK4-203ENST00000519583 ZSWIM5Q9P217 1185 aa9.28□□□□□ -0.92
CLK4-203ENST00000519583 HERC5Q9UII4 1024 aaKnown RBP9.28□□□□□ -0.92
CLK4-203ENST00000519583 ZNF112Q9UJU3 913 aa9.28□□□□□ -0.92
CLK4-203ENST00000519583 MYH1P12882 1939 aa9.28□□□□□ -0.92
CLK4-203ENST00000519583 XRCC6P12956 609 aaKnown RBP eCLIP9.28□□□□□ -0.92
CLK4-203ENST00000519583 TMEM67Q5HYA8 995 aa9.28□□□□□ -0.92
CLK4-203ENST00000519583 AMOTL1Q8IY63 956 aa9.28□□□□□ -0.92
CLK4-203ENST00000519583 CNKSR2Q8WXI2 1034 aa9.28□□□□□ -0.92
CLK4-203ENST00000519583 TMEM87BQ96K49 555 aa9.28□□□□□ -0.92
CLK4-203ENST00000519583 KRT23Q9C075 422 aa9.28□□□□□ -0.92
CLK4-203ENST00000519583 CNNM2Q9H8M5 875 aa9.28□□□□□ -0.92
CLK4-203ENST00000519583 SNCAIPQ9Y6H5 919 aa9.28□□□□□ -0.92
CLK4-203ENST00000519583 PHF20L1A8MW92 1017 aa9.28□□□□□ -0.92
CLK4-203ENST00000519583 USP17L12C9JPN9 530 aa9.28□□□□□ -0.92
CLK4-203ENST00000519583 USP17L21D6R901 530 aa9.28□□□□□ -0.92
CLK4-203ENST00000519583 RXRAP19793 462 aa9.28□□□□□ -0.92
CLK4-203ENST00000519583 KRT85P78386 507 aa9.28□□□□□ -0.92
CLK4-203ENST00000519583 KIF23Q02241 960 aaPredicted RBP9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms