RNA–Protein interactions for RNA: ENST00000519485.1

CSMD3-209, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 3

Gene CSMD3, Length 452 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-209ENST00000519485 PARD6AQ9NPB6 346 aa5.79□□□□□ -1.48
CSMD3-209ENST00000519485 GFRA2O00451 464 aa5.78□□□□□ -1.48
CSMD3-209ENST00000519485 SEMA7AO75326 666 aa5.78□□□□□ -1.48
CSMD3-209ENST00000519485 RPS26P62854 115 aaKnown RBP5.78□□□□□ -1.48
CSMD3-209ENST00000519485 FMR1Q06787 632 aaKnown RBP eCLIP5.78□□□□□ -1.48
CSMD3-209ENST00000519485 ALG1LQ6GMV1 187 aa5.78□□□□□ -1.48
CSMD3-209ENST00000519485 RETREG2Q8NC44 543 aa5.78□□□□□ -1.48
CSMD3-209ENST00000519485 BAHD1Q8TBE0 780 aaPredicted RBP5.78□□□□□ -1.48
CSMD3-209ENST00000519485 DUSP15Q9H1R2 295 aaPredicted RBP5.78□□□□□ -1.48
CSMD3-209ENST00000519485 FAM8A1Q9UBU6 413 aa5.78□□□□□ -1.48
CSMD3-209ENST00000519485 GNEQ9Y223 722 aaKnown RBP5.78□□□□□ -1.48
CSMD3-209ENST00000519485 GRK4P32298 578 aa5.77□□□□□ -1.49
CSMD3-209ENST00000519485 ETV3P41162 512 aa5.77□□□□□ -1.49
CSMD3-209ENST00000519485 HK2P52789 917 aa5.77□□□□□ -1.49
CSMD3-209ENST00000519485 WIPI1Q5MNZ9 446 aaPredicted RBP5.77□□□□□ -1.49
CSMD3-209ENST00000519485 PDZRN4Q6ZMN7 1036 aaPredicted RBP5.77□□□□□ -1.49
CSMD3-209ENST00000519485 GPR62Q9BZJ7 368 aa5.77□□□□□ -1.49
CSMD3-209ENST00000519485 RNF32Q9H0A6 362 aa5.77□□□□□ -1.49
CSMD3-209ENST00000519485 SLC6A17Q9H1V8 727 aa5.77□□□□□ -1.49
CSMD3-209ENST00000519485 ADAMTS10Q9H324 1103 aa5.77□□□□□ -1.49
CSMD3-209ENST00000519485 TRIT1Q9H3H1 467 aaKnown RBP5.77□□□□□ -1.49
CSMD3-209ENST00000519485 CWC22Q9HCG8 908 aaKnown RBP5.77□□□□□ -1.49
CSMD3-209ENST00000519485 SLC6A19Q695T7 634 aa5.76□□□□□ -1.49
CSMD3-209ENST00000519485 RELTQ969Z4 430 aa5.76□□□□□ -1.49
CSMD3-209ENST00000519485 Q96M66 194 aa5.76□□□□□ -1.49
CSMD3-209ENST00000519485 MCOLN1Q9GZU1 580 aa5.76□□□□□ -1.49
CSMD3-209ENST00000519485 C12orf49Q9H741 205 aa5.76□□□□□ -1.49
CSMD3-209ENST00000519485 SPG7Q9UQ90 795 aa5.76□□□□□ -1.49
CSMD3-209ENST00000519485 JAG2Q9Y219 1238 aa5.76□□□□□ -1.49
CSMD3-209ENST00000519485 FITM1A5D6W6 292 aa5.75□□□□□ -1.49
CSMD3-209ENST00000519485 ZGLP1P0C6A0 271 aa5.75□□□□□ -1.49
CSMD3-209ENST00000519485 DLG4P78352 724 aa5.75□□□□□ -1.49
CSMD3-209ENST00000519485 CDH24Q86UP0 819 aa5.75□□□□□ -1.49
CSMD3-209ENST00000519485 CREG2Q8IUH2 290 aa5.75□□□□□ -1.49
CSMD3-209ENST00000519485 OXR1Q8N573 874 aa5.75□□□□□ -1.49
CSMD3-209ENST00000519485 DNAJB8Q8NHS0 232 aa5.75□□□□□ -1.49
CSMD3-209ENST00000519485 KCNC2Q96PR1 638 aa5.75□□□□□ -1.49
CSMD3-209ENST00000519485 IRF2BPLQ9H1B7 796 aa5.75□□□□□ -1.49
CSMD3-209ENST00000519485 TEX51A0A1B0GUA7 166 aa5.74□□□□□ -1.49
CSMD3-209ENST00000519485 MYOCOSA0A1B0GUC4 107 aa5.74□□□□□ -1.49
CSMD3-209ENST00000519485 TPP2P29144 1249 aaPredicted RBP5.74□□□□□ -1.49
CSMD3-209ENST00000519485 CDK8P49336 464 aa5.74□□□□□ -1.49
CSMD3-209ENST00000519485 SNX17Q15036 470 aa5.74□□□□□ -1.49
CSMD3-209ENST00000519485 TTBK2Q6IQ55 1244 aa5.74□□□□□ -1.49
CSMD3-209ENST00000519485 TSPYL5Q86VY4 417 aaPredicted RBP5.74□□□□□ -1.49
CSMD3-209ENST00000519485 TMEM87BQ96K49 555 aa5.74□□□□□ -1.49
CSMD3-209ENST00000519485 FRMD6Q96NE9 622 aa5.74□□□□□ -1.49
CSMD3-209ENST00000519485 ZNF552Q9H707 407 aaPredicted RBP5.74□□□□□ -1.49
CSMD3-209ENST00000519485 TJP2Q9UDY2 1190 aa5.74□□□□□ -1.49
CSMD3-209ENST00000519485 YBX2Q9Y2T7 364 aaKnown RBP5.74□□□□□ -1.49
CSMD3-209ENST00000519485 USP17L7P0C7H9 530 aa5.73□□□□□ -1.49
CSMD3-209ENST00000519485 MAPK1P28482 360 aa5.73□□□□□ -1.49
CSMD3-209ENST00000519485 MCATQ8IVS2 390 aaKnown RBP5.73□□□□□ -1.49
CSMD3-209ENST00000519485 XAGE3Q8WTP9 111 aa5.73□□□□□ -1.49
CSMD3-209ENST00000519485 DHX38Q92620 1227 aaKnown RBP5.73□□□□□ -1.49
CSMD3-209ENST00000519485 GPATCH2Q9NW75 528 aa5.73□□□□□ -1.49
CSMD3-209ENST00000519485 ADAM30Q9UKF2 790 aa5.73□□□□□ -1.49
CSMD3-209ENST00000519485 CEP131Q9UPN4 1083 aa5.73□□□□□ -1.49
CSMD3-209ENST00000519485 A0A0G2JLL6 359 aaPredicted RBP5.72□□□□□ -1.49
CSMD3-209ENST00000519485 WASH4PA8MWX3 477 aa5.72□□□□□ -1.49
CSMD3-209ENST00000519485 FOXD2O60548 495 aaPredicted RBP5.72□□□□□ -1.49
CSMD3-209ENST00000519485 TRHRP34981 398 aaPredicted RBP5.72□□□□□ -1.49
CSMD3-209ENST00000519485 INTS4Q96HW7 963 aaKnown RBP5.72□□□□□ -1.49
CSMD3-209ENST00000519485 GCM1Q9NP62 436 aa5.72□□□□□ -1.49
CSMD3-209ENST00000519485 BIN2Q9UBW5 565 aaPredicted RBP5.72□□□□□ -1.49
CSMD3-209ENST00000519485 DUSP13Q9UII6 198 aa5.72□□□□□ -1.49
CSMD3-209ENST00000519485 HRKO00198 91 aa5.71□□□□□ -1.5
CSMD3-209ENST00000519485 PGRP06401 933 aa5.71□□□□□ -1.5
CSMD3-209ENST00000519485 MAPK8P45983 427 aa5.71□□□□□ -1.5
CSMD3-209ENST00000519485 CHRNEQ04844 493 aa5.71□□□□□ -1.5
CSMD3-209ENST00000519485 EGR3Q06889 387 aa5.71□□□□□ -1.5
CSMD3-209ENST00000519485 TIGD5Q53EQ6 642 aa5.71□□□□□ -1.5
CSMD3-209ENST00000519485 ZNF385BQ569K4 471 aa5.71□□□□□ -1.5
CSMD3-209ENST00000519485 TCERG1LQ5VWI1 586 aa5.71□□□□□ -1.5
CSMD3-209ENST00000519485 AGMOQ6ZNB7 445 aa5.71□□□□□ -1.5
CSMD3-209ENST00000519485 SPPL2CQ8IUH8 684 aa5.71□□□□□ -1.5
CSMD3-209ENST00000519485 TMEM151BQ8IW70 566 aa5.71□□□□□ -1.5
CSMD3-209ENST00000519485 ZSCAN29Q8IWY8 852 aaPredicted RBP5.71□□□□□ -1.5
CSMD3-209ENST00000519485 MARCH10Q8NA82 808 aaPredicted RBP5.71□□□□□ -1.5
CSMD3-209ENST00000519485 PPP1R13LQ8WUF5 828 aa5.71□□□□□ -1.5
CSMD3-209ENST00000519485 ZCCHC4Q9H5U6 513 aa5.71□□□□□ -1.5
CSMD3-209ENST00000519485 C19orf44Q9H6X5 657 aa5.71□□□□□ -1.5
CSMD3-209ENST00000519485 RTEL1Q9NZ71 1219 aa5.71□□□□□ -1.5
CSMD3-209ENST00000519485 ZNF281Q9Y2X9 895 aa5.71□□□□□ -1.5
CSMD3-209ENST00000519485 ATP2B2Q01814 1243 aa5.7□□□□□ -1.5
CSMD3-209ENST00000519485 PDE4BQ07343 736 aa5.7□□□□□ -1.5
CSMD3-209ENST00000519485 DBX2Q6ZNG2 339 aa5.7□□□□□ -1.5
CSMD3-209ENST00000519485 DTWD2Q8NBA8 298 aa5.7□□□□□ -1.5
CSMD3-209ENST00000519485 ASB16Q96NS5 453 aa5.7□□□□□ -1.5
CSMD3-209ENST00000519485 SETDB2Q96T68 719 aa5.7□□□□□ -1.5
CSMD3-209ENST00000519485 KCNH3Q9ULD8 1083 aa5.7□□□□□ -1.5
CSMD3-209ENST00000519485 CNOT6Q9ULM6 557 aaKnown RBP5.7□□□□□ -1.5
CSMD3-209ENST00000519485 RFXAPO00287 272 aa5.69□□□□□ -1.5
CSMD3-209ENST00000519485 SYN1P17600 705 aa5.69□□□□□ -1.5
CSMD3-209ENST00000519485 BMP7P18075 431 aa5.69□□□□□ -1.5
CSMD3-209ENST00000519485 ZNF605Q86T29 641 aa5.69□□□□□ -1.5
CSMD3-209ENST00000519485 ANKS4BQ8N8V4 417 aa5.69□□□□□ -1.5
CSMD3-209ENST00000519485 CXorf38Q8TB03 319 aa5.69□□□□□ -1.5
CSMD3-209ENST00000519485 CYB5D2Q8WUJ1 264 aa5.69□□□□□ -1.5
CSMD3-209ENST00000519485 SHISA4Q96DD7 197 aa5.69□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms