RNA–Protein interactions for RNA: ENST00000519482.1

TRAPPC9-206, Transcript of trafficking protein particle complex 9, humanhuman

TSL 4

Gene TRAPPC9, Length 551 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-206ENST00000519482 DDX24Q9GZR7 859 aaKnown RBP eCLIP15.03■□□□□ -0
TRAPPC9-206ENST00000519482 KIAA1683Q9H0B3 1180 aa15.03■□□□□ -0
TRAPPC9-206ENST00000519482 BOLA2Q9H3K6 86 aa15.03■□□□□ -0
TRAPPC9-206ENST00000519482 DCP1AQ9NPI6 582 aaPredicted RBP15.03■□□□□ -0
TRAPPC9-206ENST00000519482 PAK6Q9NQU5 681 aaPredicted RBP15.03■□□□□ -0
TRAPPC9-206ENST00000519482 MCM9Q9NXL9 1143 aa15.03■□□□□ -0
TRAPPC9-206ENST00000519482 RBPJLQ9UBG7 517 aa15.03■□□□□ -0
TRAPPC9-206ENST00000519482 USP17L15C9J2P7 530 aa15.02■□□□□ -0
TRAPPC9-206ENST00000519482 USP17L13C9JLJ4 530 aa15.02■□□□□ -0
TRAPPC9-206ENST00000519482 USP17L11C9JVI0 530 aa15.02■□□□□ -0
TRAPPC9-206ENST00000519482 USP17L18D6R9N7 530 aa15.02■□□□□ -0
TRAPPC9-206ENST00000519482 USP17L22D6RA61 530 aa15.02■□□□□ -0
TRAPPC9-206ENST00000519482 USP17L17D6RBQ6 530 aa15.02■□□□□ -0
TRAPPC9-206ENST00000519482 USP17L19D6RCP7 530 aa15.02■□□□□ -0
TRAPPC9-206ENST00000519482 USP17L20D6RJB6 530 aa15.02■□□□□ -0
TRAPPC9-206ENST00000519482 HMGCRP04035 888 aa15.02■□□□□ -0
TRAPPC9-206ENST00000519482 MAPK4P31152 587 aa15.02■□□□□ -0
TRAPPC9-206ENST00000519482 USP17L24Q0WX57 530 aa15.02■□□□□ -0
TRAPPC9-206ENST00000519482 LCORLQ8N3X6 602 aa15.02■□□□□ -0
TRAPPC9-206ENST00000519482 EDC3Q96F86 508 aaKnown RBP15.02■□□□□ -0
TRAPPC9-206ENST00000519482 BCL11AQ9H165 835 aa15.02■□□□□ -0
TRAPPC9-206ENST00000519482 TXNRD2Q9NNW7 524 aa15.02■□□□□ -0
TRAPPC9-206ENST00000519482 ERVK-9P63128 1117 aa15.01□□□□□ -0.01
TRAPPC9-206ENST00000519482 ERVK-24P63145 666 aa15.01□□□□□ -0.01
TRAPPC9-206ENST00000519482 UBE3CQ15386 1083 aa15.01□□□□□ -0.01
TRAPPC9-206ENST00000519482 HABP4Q5JVS0 413 aaKnown RBP15.01□□□□□ -0.01
TRAPPC9-206ENST00000519482 ZSCAN25Q6NSZ9 544 aa15.01□□□□□ -0.01
TRAPPC9-206ENST00000519482 SDR42E1Q8WUS8 393 aa15.01□□□□□ -0.01
TRAPPC9-206ENST00000519482 SOCS4Q8WXH5 440 aa15.01□□□□□ -0.01
TRAPPC9-206ENST00000519482 DEFB118Q96PH6 123 aa15.01□□□□□ -0.01
TRAPPC9-206ENST00000519482 NUDT12Q9BQG2 462 aa15.01□□□□□ -0.01
TRAPPC9-206ENST00000519482 ARMT1Q9H993 441 aa15.01□□□□□ -0.01
TRAPPC9-206ENST00000519482 ATP8A2Q9NTI2 1148 aa15.01□□□□□ -0.01
TRAPPC9-206ENST00000519482 SWAP70Q9UH65 585 aa15.01□□□□□ -0.01
TRAPPC9-206ENST00000519482 RPTORQ8N122 1335 aa15□□□□□ -0.01
TRAPPC9-206ENST00000519482 FARP2O94887 1054 aaPredicted RBP15□□□□□ -0.01
TRAPPC9-206ENST00000519482 TFRCP02786 760 aaKnown RBP15□□□□□ -0.01
TRAPPC9-206ENST00000519482 XRCC5P13010 732 aaKnown RBP15□□□□□ -0.01
TRAPPC9-206ENST00000519482 GUCY1A2P33402 732 aa15□□□□□ -0.01
TRAPPC9-206ENST00000519482 ZYXQ15942 572 aaKnown RBP15□□□□□ -0.01
TRAPPC9-206ENST00000519482 Q3C1V9 767 aa15□□□□□ -0.01
TRAPPC9-206ENST00000519482 CATSPERGQ6ZRH7 1159 aa15□□□□□ -0.01
TRAPPC9-206ENST00000519482 CCAR1Q8IX12 1150 aaKnown RBP15□□□□□ -0.01
TRAPPC9-206ENST00000519482 TRMT44Q8IYL2 757 aaKnown RBP15□□□□□ -0.01
TRAPPC9-206ENST00000519482 DPF3Q92784 378 aa15□□□□□ -0.01
TRAPPC9-206ENST00000519482 CRISPLD2Q9H0B8 497 aa15□□□□□ -0.01
TRAPPC9-206ENST00000519482 XRN2Q9H0D6 950 aaKnown RBP eCLIP15□□□□□ -0.01
TRAPPC9-206ENST00000519482 RABGAP1Q9Y3P9 1069 aa15□□□□□ -0.01
TRAPPC9-206ENST00000519482 H0YGN5 161 aa14.99□□□□□ -0.01
TRAPPC9-206ENST00000519482 PEX10O60683 326 aa14.99□□□□□ -0.01
TRAPPC9-206ENST00000519482 MBD4O95243 580 aa14.99□□□□□ -0.01
TRAPPC9-206ENST00000519482 VCAM1P19320 739 aa14.99□□□□□ -0.01
TRAPPC9-206ENST00000519482 SEPT2Q15019 361 aa14.99□□□□□ -0.01
TRAPPC9-206ENST00000519482 LBX2Q6XYB7 198 aa14.99□□□□□ -0.01
TRAPPC9-206ENST00000519482 ACER1Q8TDN7 264 aa14.99□□□□□ -0.01
TRAPPC9-206ENST00000519482 PAGR1Q9BTK6 254 aa14.99□□□□□ -0.01
TRAPPC9-206ENST00000519482 DCTPP1Q9H773 170 aa14.99□□□□□ -0.01
TRAPPC9-206ENST00000519482 HMX1Q9NP08 348 aaPredicted RBP14.99□□□□□ -0.01
TRAPPC9-206ENST00000519482 PCDH10Q9P2E7 1040 aa14.99□□□□□ -0.01
TRAPPC9-206ENST00000519482 RLFQ13129 1914 aa14.98□□□□□ -0.01
TRAPPC9-206ENST00000519482 MPHOSPH10O00566 681 aaKnown RBP14.98□□□□□ -0.01
TRAPPC9-206ENST00000519482 SMARCA5O60264 1052 aaPredicted RBP14.98□□□□□ -0.01
TRAPPC9-206ENST00000519482 CYP2B6P20813 491 aa14.98□□□□□ -0.01
TRAPPC9-206ENST00000519482 CCNA1P78396 465 aa14.98□□□□□ -0.01
TRAPPC9-206ENST00000519482 POTEEQ6S8J3 1075 aa14.98□□□□□ -0.01
TRAPPC9-206ENST00000519482 TMEM179Q6ZVK1 233 aa14.98□□□□□ -0.01
TRAPPC9-206ENST00000519482 GPR142Q7Z601 462 aa14.98□□□□□ -0.01
TRAPPC9-206ENST00000519482 PLEKHH3Q7Z736 793 aa14.98□□□□□ -0.01
TRAPPC9-206ENST00000519482 AMOTL1Q8IY63 956 aa14.98□□□□□ -0.01
TRAPPC9-206ENST00000519482 ANKLE1Q8NAG6 615 aa14.98□□□□□ -0.01
TRAPPC9-206ENST00000519482 TRIB2Q92519 343 aa14.98□□□□□ -0.01
TRAPPC9-206ENST00000519482 USP6NLQ92738 828 aa14.98□□□□□ -0.01
TRAPPC9-206ENST00000519482 DDRGK1Q96HY6 314 aa14.98□□□□□ -0.01
TRAPPC9-206ENST00000519482 PORCNQ9H237 461 aa14.98□□□□□ -0.01
TRAPPC9-206ENST00000519482 ECHDC1Q9NTX5 307 aa14.98□□□□□ -0.01
TRAPPC9-206ENST00000519482 ALPK3Q96L96 1907 aa14.98□□□□□ -0.01
TRAPPC9-206ENST00000519482 PARP14Q460N5 1801 aa14.97□□□□□ -0.01
TRAPPC9-206ENST00000519482 PRKAB2O43741 272 aa14.97□□□□□ -0.01
TRAPPC9-206ENST00000519482 CNMDO75829 334 aa14.97□□□□□ -0.01
TRAPPC9-206ENST00000519482 GLRX3O76003 335 aaKnown RBP14.97□□□□□ -0.01
TRAPPC9-206ENST00000519482 CYP2D6P10635 497 aa14.97□□□□□ -0.01
TRAPPC9-206ENST00000519482 RGS2P41220 211 aa14.97□□□□□ -0.01
TRAPPC9-206ENST00000519482 EVX2Q03828 476 aa14.97□□□□□ -0.01
TRAPPC9-206ENST00000519482 MORN1Q5T089 497 aa14.97□□□□□ -0.01
TRAPPC9-206ENST00000519482 MAP3K21Q5TCX8 1036 aa14.97□□□□□ -0.01
TRAPPC9-206ENST00000519482 C12orf60Q5U649 245 aa14.97□□□□□ -0.01
TRAPPC9-206ENST00000519482 CENPQQ7L2Z9 268 aaPredicted RBP14.97□□□□□ -0.01
TRAPPC9-206ENST00000519482 RPAP3Q9H6T3 665 aaPredicted RBP14.97□□□□□ -0.01
TRAPPC9-206ENST00000519482 COLQQ9Y215 455 aaPredicted RBP14.97□□□□□ -0.01
TRAPPC9-206ENST00000519482 NR2E3Q9Y5X4 410 aa14.97□□□□□ -0.01
TRAPPC9-206ENST00000519482 A0A0G2JMZ2 1700 aa14.97□□□□□ -0.01
TRAPPC9-206ENST00000519482 A0A1W2PRG0 241 aa14.96□□□□□ -0.01
TRAPPC9-206ENST00000519482 TRIM32Q13049 653 aa14.96□□□□□ -0.01
TRAPPC9-206ENST00000519482 SLFNL1Q499Z3 407 aa14.96□□□□□ -0.01
TRAPPC9-206ENST00000519482 DYNLL2Q96FJ2 89 aa14.96□□□□□ -0.01
TRAPPC9-206ENST00000519482 GPATCH3Q96I76 525 aa14.96□□□□□ -0.01
TRAPPC9-206ENST00000519482 CCDC17Q96LX7 622 aa14.96□□□□□ -0.01
TRAPPC9-206ENST00000519482 CWC22Q9HCG8 908 aaKnown RBP14.96□□□□□ -0.01
TRAPPC9-206ENST00000519482 SLC4A4Q9Y6R1 1079 aa14.96□□□□□ -0.01
TRAPPC9-206ENST00000519482 FRMPD3Q5JV73 1810 aa14.95□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms