RNA–Protein interactions for RNA: ENST00000519254.2

CLN8-204, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLN8, Length 1,769 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-204ENST00000519254 KIF3AQ9Y496 699 aa16.89■□□□□ 0.29
CLN8-204ENST00000519254 COL2A1P02458 1487 aaPredicted RBP16.88■□□□□ 0.29
CLN8-204ENST00000519254 H3BQV1 296 aa16.88■□□□□ 0.29
CLN8-204ENST00000519254 NMT2O60551 498 aa16.88■□□□□ 0.29
CLN8-204ENST00000519254 TSPY3P0CV98 308 aa16.88■□□□□ 0.29
CLN8-204ENST00000519254 TSPY8P0CW00 308 aa16.88■□□□□ 0.29
CLN8-204ENST00000519254 METAP2P50579 478 aaKnown RBP eCLIP16.88■□□□□ 0.29
CLN8-204ENST00000519254 RESTQ13127 1097 aa16.88■□□□□ 0.29
CLN8-204ENST00000519254 TNFAIP1Q13829 316 aa16.88■□□□□ 0.29
CLN8-204ENST00000519254 RASA3Q14644 834 aa16.88■□□□□ 0.29
CLN8-204ENST00000519254 IFFO2Q5TF58 517 aa16.88■□□□□ 0.29
CLN8-204ENST00000519254 FAM173BQ6P4H8 233 aa16.88■□□□□ 0.29
CLN8-204ENST00000519254 NFXL1Q6ZNB6 911 aa16.88■□□□□ 0.29
CLN8-204ENST00000519254 FAM83AQ86UY5 434 aa16.88■□□□□ 0.29
CLN8-204ENST00000519254 IQCA1Q86XH1 822 aa16.88■□□□□ 0.29
CLN8-204ENST00000519254 EHD4Q9H223 541 aa16.88■□□□□ 0.29
CLN8-204ENST00000519254 SWAP70Q9UH65 585 aa16.88■□□□□ 0.29
CLN8-204ENST00000519254 TNKSO95271 1327 aa16.88■□□□□ 0.29
CLN8-204ENST00000519254 MYH8P13535 1937 aa16.88■□□□□ 0.29
CLN8-204ENST00000519254 FSD2A1L4K1 749 aa16.87■□□□□ 0.29
CLN8-204ENST00000519254 ZBTB43O43298 467 aa16.87■□□□□ 0.29
CLN8-204ENST00000519254 RXRAP19793 462 aa16.87■□□□□ 0.29
CLN8-204ENST00000519254 CDC27P30260 824 aa16.87■□□□□ 0.29
CLN8-204ENST00000519254 ADD1P35611 737 aaKnown RBP16.87■□□□□ 0.29
CLN8-204ENST00000519254 WTAPQ15007 396 aa16.87■□□□□ 0.29
CLN8-204ENST00000519254 CAVIN1Q6NZI2 390 aaKnown RBP16.87■□□□□ 0.29
CLN8-204ENST00000519254 L3MBTL3Q96JM7 780 aaPredicted RBP16.87■□□□□ 0.29
CLN8-204ENST00000519254 ZSCAN10Q96SZ4 725 aaPredicted RBP16.87■□□□□ 0.29
CLN8-204ENST00000519254 DNAJC18Q9H819 358 aa16.87■□□□□ 0.29
CLN8-204ENST00000519254 FAM217BQ9NTX9 383 aaPredicted RBP16.87■□□□□ 0.29
CLN8-204ENST00000519254 CPLX1O14810 134 aa16.87■□□□□ 0.29
CLN8-204ENST00000519254 FIBPO43427 364 aa16.87■□□□□ 0.29
CLN8-204ENST00000519254 MBD3O95983 291 aa16.87■□□□□ 0.29
CLN8-204ENST00000519254 SHMT1P34896 483 aa16.87■□□□□ 0.29
CLN8-204ENST00000519254 FOSBP53539 338 aa16.87■□□□□ 0.29
CLN8-204ENST00000519254 SEC23AQ15436 765 aa16.87■□□□□ 0.29
CLN8-204ENST00000519254 MICU3Q86XE3 530 aa16.87■□□□□ 0.29
CLN8-204ENST00000519254 MYL10Q9BUA6 226 aa16.87■□□□□ 0.29
CLN8-204ENST00000519254 NID2Q14112 1375 aa16.86■□□□□ 0.29
CLN8-204ENST00000519254 CCDC69A6NI79 296 aa16.86■□□□□ 0.29
CLN8-204ENST00000519254 ENAHQ8N8S7 591 aaPredicted RBP16.86■□□□□ 0.29
CLN8-204ENST00000519254 RBM27Q9P2N5 1060 aaKnown RBP16.86■□□□□ 0.29
CLN8-204ENST00000519254 ORC3Q9UBD5 711 aaPredicted RBP16.86■□□□□ 0.29
CLN8-204ENST00000519254 SLC12A7Q9Y666 1083 aa16.86■□□□□ 0.29
CLN8-204ENST00000519254 MPHOSPH10O00566 681 aaKnown RBP16.85■□□□□ 0.29
CLN8-204ENST00000519254 AKR1B1P15121 316 aa16.85■□□□□ 0.29
CLN8-204ENST00000519254 EPHX2P34913 555 aa16.85■□□□□ 0.29
CLN8-204ENST00000519254 NTRK3Q16288 839 aa16.85■□□□□ 0.29
CLN8-204ENST00000519254 APOBEC3FQ8IUX4 373 aaKnown RBP16.85■□□□□ 0.29
CLN8-204ENST00000519254 FOXP4Q8IVH2 680 aaPredicted RBP16.85■□□□□ 0.29
CLN8-204ENST00000519254 TMTC2Q8N394 836 aa16.85■□□□□ 0.29
CLN8-204ENST00000519254 DEFB129Q9H1M3 183 aa16.85■□□□□ 0.29
CLN8-204ENST00000519254 ZSCAN16Q9H4T2 348 aaPredicted RBP16.85■□□□□ 0.29
CLN8-204ENST00000519254 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.85■□□□□ 0.293e-6■■■■■ 29.3
CLN8-204ENST00000519254 MYH6P13533 1939 aa16.85■□□□□ 0.29
CLN8-204ENST00000519254 GOLGA8AA7E2F4 631 aa16.84■□□□□ 0.29
CLN8-204ENST00000519254 KRT85P78386 507 aa16.84■□□□□ 0.29
CLN8-204ENST00000519254 IFIT1BQ5T764 474 aaKnown RBP16.84■□□□□ 0.29
CLN8-204ENST00000519254 MIGA2Q7L4E1 593 aa16.84■□□□□ 0.29
CLN8-204ENST00000519254 CCDC144CPQ8IYA2 1237 aa16.84■□□□□ 0.29
CLN8-204ENST00000519254 TMEM63CQ9P1W3 806 aa16.84■□□□□ 0.29
CLN8-204ENST00000519254 IL17RBQ9NRM6 502 aa16.84■□□□□ 0.29
CLN8-204ENST00000519254 GDF11O95390 407 aa16.83■□□□□ 0.28
CLN8-204ENST00000519254 UBE2HP62256 183 aa16.83■□□□□ 0.28
CLN8-204ENST00000519254 GUCY1B3Q02153 619 aa16.83■□□□□ 0.28
CLN8-204ENST00000519254 CSPP1Q1MSJ5 1256 aa16.83■□□□□ 0.28
CLN8-204ENST00000519254 ZSCAN23Q3MJ62 389 aa16.83■□□□□ 0.28
CLN8-204ENST00000519254 CERKLQ49MI3 558 aaPredicted RBP16.83■□□□□ 0.28
CLN8-204ENST00000519254 EAPPQ56P03 285 aaPredicted RBP16.83■□□□□ 0.28
CLN8-204ENST00000519254 PRAMEF18Q5VWM3 479 aa16.83■□□□□ 0.28
CLN8-204ENST00000519254 SYNE3Q6ZMZ3 975 aa16.83■□□□□ 0.28
CLN8-204ENST00000519254 GAS2L3Q86XJ1 694 aa16.83■□□□□ 0.28
CLN8-204ENST00000519254 NEDD1Q8NHV4 660 aa16.83■□□□□ 0.28
CLN8-204ENST00000519254 TFIP11Q9UBB9 837 aaKnown RBP16.83■□□□□ 0.28
CLN8-204ENST00000519254 PGAP2Q9UHJ9 254 aa16.83■□□□□ 0.28
CLN8-204ENST00000519254 HERC5Q9UII4 1024 aaKnown RBP16.83■□□□□ 0.28
CLN8-204ENST00000519254 IQCA1LA6NCM1 817 aa16.82■□□□□ 0.28
CLN8-204ENST00000519254 GOLGA6L3A6NEY3 463 aa16.82■□□□□ 0.28
CLN8-204ENST00000519254 CDKL5O76039 1030 aa16.82■□□□□ 0.28
CLN8-204ENST00000519254 NT5C2P49902 561 aa16.82■□□□□ 0.28
CLN8-204ENST00000519254 RCAN1P53805 252 aa16.82■□□□□ 0.28
CLN8-204ENST00000519254 SHROOM1Q2M3G4 852 aaPredicted RBP16.82■□□□□ 0.28
CLN8-204ENST00000519254 OTUD7BQ6GQQ9 843 aa16.82■□□□□ 0.28
CLN8-204ENST00000519254 ZNF654Q8IZM8 581 aa16.82■□□□□ 0.28
CLN8-204ENST00000519254 TEPSINQ96N21 525 aa16.82■□□□□ 0.28
CLN8-204ENST00000519254 STX8Q9UNK0 236 aa16.82■□□□□ 0.28
CLN8-204ENST00000519254 ZNF445P59923 1031 aa16.82■□□□□ 0.28
CLN8-204ENST00000519254 TATDN1Q6P1N9 297 aa16.82■□□□□ 0.28
CLN8-204ENST00000519254 CPLX2Q6PUV4 134 aaKnown RBP16.82■□□□□ 0.28
CLN8-204ENST00000519254 USP50Q70EL3 339 aaPredicted RBP16.82■□□□□ 0.28
CLN8-204ENST00000519254 METTL16Q86W50 562 aaKnown RBP16.82■□□□□ 0.28
CLN8-204ENST00000519254 CLEC10AQ8IUN9 316 aa16.82■□□□□ 0.28
CLN8-204ENST00000519254 FBXO18Q8NFZ0 1043 aa16.82■□□□□ 0.28
CLN8-204ENST00000519254 PHKBQ93100 1093 aa16.82■□□□□ 0.28
CLN8-204ENST00000519254 DCPSQ96C86 337 aaKnown RBP16.82■□□□□ 0.28
CLN8-204ENST00000519254 CEP95Q96GE4 821 aa16.82■□□□□ 0.28
CLN8-204ENST00000519254 C8orf76Q96K31 380 aa16.82■□□□□ 0.28
CLN8-204ENST00000519254 ELP1O95163 1332 aa16.81■□□□□ 0.28
CLN8-204ENST00000519254 WDR90Q96KV7 1748 aa16.81■□□□□ 0.28
CLN8-204ENST00000519254 NBPF12Q5TAG4 269 aaPredicted RBP16.81■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms