RNA–Protein interactions for RNA: ENST00000519115.5

SDCBP-206, Transcript of syndecan binding protein, humanhuman

TSL 2

Gene SDCBP, Length 812 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-206ENST00000519115 C12orf60Q5U649 245 aa9.02□□□□□ -0.97
SDCBP-206ENST00000519115 OTUD7BQ6GQQ9 843 aa9.02□□□□□ -0.97
SDCBP-206ENST00000519115 GADL1Q6ZQY3 521 aa9.02□□□□□ -0.97
SDCBP-206ENST00000519115 MAP4K1Q92918 833 aa9.02□□□□□ -0.97
SDCBP-206ENST00000519115 KCNB2Q92953 911 aa9.02□□□□□ -0.97
SDCBP-206ENST00000519115 PRDM10Q9NQV6 1147 aa9.02□□□□□ -0.97
SDCBP-206ENST00000519115 ARPP21Q9UBL0 812 aaPredicted RBP9.02□□□□□ -0.97
SDCBP-206ENST00000519115 MGAMO43451 1857 aa9.02□□□□□ -0.97
SDCBP-206ENST00000519115 A0A0G2JLL6 359 aaPredicted RBP9.01□□□□□ -0.97
SDCBP-206ENST00000519115 MINDY4BA8MYZ0 360 aa9.01□□□□□ -0.97
SDCBP-206ENST00000519115 MPHOSPH10O00566 681 aaKnown RBP9.01□□□□□ -0.97
SDCBP-206ENST00000519115 CXCL11O14625 94 aa9.01□□□□□ -0.97
SDCBP-206ENST00000519115 FOXP2O15409 715 aa9.01□□□□□ -0.97
SDCBP-206ENST00000519115 ALDH1A1P00352 501 aa9.01□□□□□ -0.97
SDCBP-206ENST00000519115 GNAT2P19087 354 aa9.01□□□□□ -0.97
SDCBP-206ENST00000519115 CDK8P49336 464 aa9.01□□□□□ -0.97
SDCBP-206ENST00000519115 NT5C2P49902 561 aa9.01□□□□□ -0.97
SDCBP-206ENST00000519115 HMGCS2P54868 508 aa9.01□□□□□ -0.97
SDCBP-206ENST00000519115 MTMR2Q13614 643 aa9.01□□□□□ -0.97
SDCBP-206ENST00000519115 RAB3GAP1Q15042 981 aa9.01□□□□□ -0.97
SDCBP-206ENST00000519115 ABCB5Q2M3G0 1257 aa9.01□□□□□ -0.97
SDCBP-206ENST00000519115 VPS53Q5VIR6 699 aa9.01□□□□□ -0.97
SDCBP-206ENST00000519115 TATDN1Q6P1N9 297 aa9.01□□□□□ -0.97
SDCBP-206ENST00000519115 PRRT2Q7Z6L0 340 aaPredicted RBP9.01□□□□□ -0.97
SDCBP-206ENST00000519115 ZNF589Q86UQ0 364 aaPredicted RBP9.01□□□□□ -0.97
SDCBP-206ENST00000519115 CLEC10AQ8IUN9 316 aa9.01□□□□□ -0.97
SDCBP-206ENST00000519115 ZNF280CQ8ND82 737 aa9.01□□□□□ -0.97
SDCBP-206ENST00000519115 SNX21Q969T3 373 aa9.01□□□□□ -0.97
SDCBP-206ENST00000519115 IPO9Q96P70 1041 aaKnown RBP9.01□□□□□ -0.97
SDCBP-206ENST00000519115 NAPBQ9H115 298 aa9.01□□□□□ -0.97
SDCBP-206ENST00000519115 ROBO3Q96MS0 1386 aa9□□□□□ -0.97
SDCBP-206ENST00000519115 DOCK3Q8IZD9 2030 aa9□□□□□ -0.97
SDCBP-206ENST00000519115 PATL2C9JE40 543 aaKnown RBP9□□□□□ -0.97
SDCBP-206ENST00000519115 GPR25O00155 361 aa9□□□□□ -0.97
SDCBP-206ENST00000519115 PDHXO00330 501 aa9□□□□□ -0.97
SDCBP-206ENST00000519115 AKR1B1P15121 316 aa9□□□□□ -0.97
SDCBP-206ENST00000519115 MCM2P49736 904 aa9□□□□□ -0.97
SDCBP-206ENST00000519115 BECN1Q14457 450 aa9□□□□□ -0.97
SDCBP-206ENST00000519115 SEPT2Q15019 361 aa9□□□□□ -0.97
SDCBP-206ENST00000519115 RABEP1Q15276 862 aa9□□□□□ -0.97
SDCBP-206ENST00000519115 ZYXQ15942 572 aaKnown RBP9□□□□□ -0.97
SDCBP-206ENST00000519115 RNF20Q5VTR2 975 aa9□□□□□ -0.97
SDCBP-206ENST00000519115 GPAT2Q6NUI2 795 aa9□□□□□ -0.97
SDCBP-206ENST00000519115 GIMAP6Q6P9H5 292 aa9□□□□□ -0.97
SDCBP-206ENST00000519115 CWC27Q6UX04 472 aaKnown RBP9□□□□□ -0.97
SDCBP-206ENST00000519115 C16orf86Q6ZW13 317 aa9□□□□□ -0.97
SDCBP-206ENST00000519115 IFNL3Q8IZI9 196 aa9□□□□□ -0.97
SDCBP-206ENST00000519115 ZNF296Q8WUU4 475 aaPredicted RBP9□□□□□ -0.97
SDCBP-206ENST00000519115 FEZ1Q99689 392 aa9□□□□□ -0.97
SDCBP-206ENST00000519115 DSCC1Q9BVC3 393 aa9□□□□□ -0.97
SDCBP-206ENST00000519115 NACAP1Q9BZK3 213 aa9□□□□□ -0.97
SDCBP-206ENST00000519115 TM6SF1Q9BZW5 370 aa9□□□□□ -0.97
SDCBP-206ENST00000519115 AS3MTQ9HBK9 375 aa9□□□□□ -0.97
SDCBP-206ENST00000519115 CABP5Q9NP86 173 aa9□□□□□ -0.97
SDCBP-206ENST00000519115 SWAP70Q9UH65 585 aa9□□□□□ -0.97
SDCBP-206ENST00000519115 CCDC171Q6TFL3 1326 aa9□□□□□ -0.97
SDCBP-206ENST00000519115 PARP14Q460N5 1801 aa8.99□□□□□ -0.97
SDCBP-206ENST00000519115 GUCY1A2P33402 732 aa8.99□□□□□ -0.97
SDCBP-206ENST00000519115 HSPA4P34932 840 aa8.99□□□□□ -0.97
SDCBP-206ENST00000519115 KRT32Q14532 448 aa8.99□□□□□ -0.97
SDCBP-206ENST00000519115 ALX1Q15699 326 aa8.99□□□□□ -0.97
SDCBP-206ENST00000519115 SBK1Q52WX2 424 aa8.99□□□□□ -0.97
SDCBP-206ENST00000519115 TREML2Q5T2D2 321 aa8.99□□□□□ -0.97
SDCBP-206ENST00000519115 FASTKD5Q7L8L6 764 aaKnown RBP8.99□□□□□ -0.97
SDCBP-206ENST00000519115 ANKRD23Q86SG2 305 aa8.99□□□□□ -0.97
SDCBP-206ENST00000519115 TNS4Q8IZW8 715 aa8.99□□□□□ -0.97
SDCBP-206ENST00000519115 ACER1Q8TDN7 264 aa8.99□□□□□ -0.97
SDCBP-206ENST00000519115 WDR18Q9BV38 432 aa8.99□□□□□ -0.97
SDCBP-206ENST00000519115 CFHR5Q9BXR6 569 aa8.99□□□□□ -0.97
SDCBP-206ENST00000519115 TBC1D2Q9BYX2 928 aa8.99□□□□□ -0.97
SDCBP-206ENST00000519115 LSG1Q9H089 658 aaKnown RBP8.99□□□□□ -0.97
SDCBP-206ENST00000519115 ALDH8A1Q9H2A2 487 aaPredicted RBP8.99□□□□□ -0.97
SDCBP-206ENST00000519115 ZFYVE28Q9HCC9 887 aa8.99□□□□□ -0.97
SDCBP-206ENST00000519115 GINM1Q9NU53 330 aa8.99□□□□□ -0.97
SDCBP-206ENST00000519115 CTNNA3Q9UI47 895 aa8.99□□□□□ -0.97
SDCBP-206ENST00000519115 USP17L10C9JJH3 530 aa8.98□□□□□ -0.97
SDCBP-206ENST00000519115 FKTNO75072 461 aa8.98□□□□□ -0.97
SDCBP-206ENST00000519115 PRDM1O75626 825 aa8.98□□□□□ -0.97
SDCBP-206ENST00000519115 ECM2O94769 699 aaPredicted RBP8.98□□□□□ -0.97
SDCBP-206ENST00000519115 PRR29P0C7W0 189 aa8.98□□□□□ -0.97
SDCBP-206ENST00000519115 CYP2C8P10632 490 aa8.98□□□□□ -0.97
SDCBP-206ENST00000519115 ZKSCAN1P17029 563 aaPredicted RBP8.98□□□□□ -0.97
SDCBP-206ENST00000519115 RASA1P20936 1047 aa8.98□□□□□ -0.97
SDCBP-206ENST00000519115 BACE1P56817 501 aa8.98□□□□□ -0.97
SDCBP-206ENST00000519115 CTDSPL2Q05D32 466 aa8.98□□□□□ -0.97
SDCBP-206ENST00000519115 PPARAQ07869 468 aa8.98□□□□□ -0.97
SDCBP-206ENST00000519115 NECTIN1Q15223 517 aa8.98□□□□□ -0.97
SDCBP-206ENST00000519115 TMEM179Q6ZVK1 233 aa8.98□□□□□ -0.97
SDCBP-206ENST00000519115 IL25Q9H293 177 aa8.98□□□□□ -0.97
SDCBP-206ENST00000519115 MKNK2Q9HBH9 465 aa8.98□□□□□ -0.97
SDCBP-206ENST00000519115 ZCCHC17Q9NP64 241 aaKnown RBP8.98□□□□□ -0.97
SDCBP-206ENST00000519115 TMOD4Q9NZQ9 345 aa8.98□□□□□ -0.97
SDCBP-206ENST00000519115 CPA4Q9UI42 421 aa8.98□□□□□ -0.97
SDCBP-206ENST00000519115 AGTPBP1Q9UPW5 1226 aa8.98□□□□□ -0.97
SDCBP-206ENST00000519115 ZMYM6O95789 1325 aa8.98□□□□□ -0.97
SDCBP-206ENST00000519115 ADGRA2Q96PE1 1338 aa8.98□□□□□ -0.97
SDCBP-206ENST00000519115 COL11A1P12107 1806 aaPredicted RBP8.98□□□□□ -0.97
SDCBP-206ENST00000519115 RLFQ13129 1914 aa8.97□□□□□ -0.97
SDCBP-206ENST00000519115 TLR2O60603 784 aa8.97□□□□□ -0.97
SDCBP-206ENST00000519115 HMGB1P09429 215 aaKnown RBP8.97□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 64.9 ms