RNA–Protein interactions for RNA: ENST00000518723.1

TRAPPC9-204, Transcript of trafficking protein particle complex 9, humanhuman

TSL 4

Gene TRAPPC9, Length 558 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-204ENST00000518723 IGHA2P01877 340 aa15.15■□□□□ 0.02
TRAPPC9-204ENST00000518723 HLA-DOAP06340 250 aa15.15■□□□□ 0.02
TRAPPC9-204ENST00000518723 GRB14Q14449 540 aa15.15■□□□□ 0.02
TRAPPC9-204ENST00000518723 ADGRA1Q86SQ6 560 aa15.15■□□□□ 0.02
TRAPPC9-204ENST00000518723 ARHGAP45Q92619 1136 aa15.15■□□□□ 0.02
TRAPPC9-204ENST00000518723 FAM161BQ96MY7 647 aa15.15■□□□□ 0.02
TRAPPC9-204ENST00000518723 PRKAG2Q9UGJ0 569 aa15.15■□□□□ 0.02
TRAPPC9-204ENST00000518723 ATN1P54259 1190 aaPredicted RBP15.14■□□□□ 0.01
TRAPPC9-204ENST00000518723 USP14P54578 494 aa15.14■□□□□ 0.01
TRAPPC9-204ENST00000518723 RTP1P59025 263 aa15.14■□□□□ 0.01
TRAPPC9-204ENST00000518723 ATP2B2Q01814 1243 aa15.14■□□□□ 0.01
TRAPPC9-204ENST00000518723 TATDN1Q6P1N9 297 aa15.14■□□□□ 0.01
TRAPPC9-204ENST00000518723 CATSPERGQ6ZRH7 1159 aa15.14■□□□□ 0.01
TRAPPC9-204ENST00000518723 CDX2Q99626 313 aaPredicted RBP15.14■□□□□ 0.01
TRAPPC9-204ENST00000518723 KIAA1683Q9H0B3 1180 aa15.14■□□□□ 0.01
TRAPPC9-204ENST00000518723 SNRKQ9NRH2 765 aa15.14■□□□□ 0.01
TRAPPC9-204ENST00000518723 FRMPD3Q5JV73 1810 aa15.14■□□□□ 0.01
TRAPPC9-204ENST00000518723 CYP2E1P05181 493 aaPredicted RBP15.13■□□□□ 0.01
TRAPPC9-204ENST00000518723 G3BP1Q13283 466 aaKnown RBP eCLIP15.13■□□□□ 0.01
TRAPPC9-204ENST00000518723 ZNF512BQ96KM6 892 aaPredicted RBP15.13■□□□□ 0.01
TRAPPC9-204ENST00000518723 GPR108Q9NPR9 543 aa15.13■□□□□ 0.01
TRAPPC9-204ENST00000518723 SAP30BPQ9UHR5 308 aaKnown RBP15.13■□□□□ 0.01
TRAPPC9-204ENST00000518723 NDUFB9Q9Y6M9 179 aa15.13■□□□□ 0.01
TRAPPC9-204ENST00000518723 IVNS1ABPQ9Y6Y0 642 aa15.13■□□□□ 0.01
TRAPPC9-204ENST00000518723 CYBAP13498 195 aa15.12■□□□□ 0.01
TRAPPC9-204ENST00000518723 VCAM1P19320 739 aa15.12■□□□□ 0.01
TRAPPC9-204ENST00000518723 CNGA1P29973 690 aa15.12■□□□□ 0.01
TRAPPC9-204ENST00000518723 CYP2C19P33261 490 aa15.12■□□□□ 0.01
TRAPPC9-204ENST00000518723 SHHQ15465 462 aa15.12■□□□□ 0.01
TRAPPC9-204ENST00000518723 TTC39AQ5SRH9 613 aa15.12■□□□□ 0.01
TRAPPC9-204ENST00000518723 WDR78Q5VTH9 848 aa15.12■□□□□ 0.01
TRAPPC9-204ENST00000518723 CERS3Q8IU89 383 aa15.12■□□□□ 0.01
TRAPPC9-204ENST00000518723 ARRDC4Q8NCT1 418 aa15.12■□□□□ 0.01
TRAPPC9-204ENST00000518723 TRPV1Q8NER1 839 aa15.12■□□□□ 0.01
TRAPPC9-204ENST00000518723 MAFAQ8NHW3 353 aaPredicted RBP15.12■□□□□ 0.01
TRAPPC9-204ENST00000518723 NPLOC4Q8TAT6 608 aa15.12■□□□□ 0.01
TRAPPC9-204ENST00000518723 FEZ1Q99689 392 aa15.12■□□□□ 0.01
TRAPPC9-204ENST00000518723 EHD4Q9H223 541 aa15.12■□□□□ 0.01
TRAPPC9-204ENST00000518723 SEMA6BQ9H3T3 888 aa15.12■□□□□ 0.01
TRAPPC9-204ENST00000518723 BTBD7Q9P203 1132 aa15.12■□□□□ 0.01
TRAPPC9-204ENST00000518723 FOCADQ5VW36 1801 aa15.12■□□□□ 0.01
TRAPPC9-204ENST00000518723 LTBP2Q14767 1821 aa15.11■□□□□ 0.01
TRAPPC9-204ENST00000518723 PNMA6EA0A0J9YXQ4 647 aa15.11■□□□□ 0.01
TRAPPC9-204ENST00000518723 SPDYE16A6NNV3 312 aaPredicted RBP15.11■□□□□ 0.01
TRAPPC9-204ENST00000518723 GNAI2P04899 355 aa15.11■□□□□ 0.01
TRAPPC9-204ENST00000518723 RARSP54136 660 aaKnown RBP15.11■□□□□ 0.01
TRAPPC9-204ENST00000518723 SMAD3P84022 425 aaKnown RBP15.11■□□□□ 0.01
TRAPPC9-204ENST00000518723 SNX17Q15036 470 aa15.11■□□□□ 0.01
TRAPPC9-204ENST00000518723 ZYXQ15942 572 aaKnown RBP15.11■□□□□ 0.01
TRAPPC9-204ENST00000518723 CCDC158Q5M9N0 1113 aa15.11■□□□□ 0.01
TRAPPC9-204ENST00000518723 OLFML2BQ68BL8 750 aa15.11■□□□□ 0.01
TRAPPC9-204ENST00000518723 SERPINB13Q9UIV8 391 aa15.11■□□□□ 0.01
TRAPPC9-204ENST00000518723 ATP11BQ9Y2G3 1177 aa15.11■□□□□ 0.01
TRAPPC9-204ENST00000518723 CDK5RAP2Q96SN8 1893 aa15.1■□□□□ 0.01
TRAPPC9-204ENST00000518723 DYNLL1P63167 89 aaKnown RBP15.1■□□□□ 0.01
TRAPPC9-204ENST00000518723 TNNI3KQ59H18 835 aa15.1■□□□□ 0.01
TRAPPC9-204ENST00000518723 C9orf50Q5SZB4 431 aa15.1■□□□□ 0.01
TRAPPC9-204ENST00000518723 SLC39A5Q6ZMH5 540 aa15.1■□□□□ 0.01
TRAPPC9-204ENST00000518723 ACER1Q8TDN7 264 aa15.1■□□□□ 0.01
TRAPPC9-204ENST00000518723 DBNDD2Q9BQY9 259 aa15.1■□□□□ 0.01
TRAPPC9-204ENST00000518723 FPGT-TNNI3KV9GXZ4 949 aa15.1■□□□□ 0.01
TRAPPC9-204ENST00000518723 MUC3AQ02505 3323 aa15.1■□□□□ 0.01
TRAPPC9-204ENST00000518723 KBTBD13C9JR72 458 aa15.09■□□□□ 0.01
TRAPPC9-204ENST00000518723 STRNO43815 780 aa15.09■□□□□ 0.01
TRAPPC9-204ENST00000518723 CYP7A1P22680 504 aa15.09■□□□□ 0.01
TRAPPC9-204ENST00000518723 ZAP70P43403 619 aa15.09■□□□□ 0.01
TRAPPC9-204ENST00000518723 RAB3GAP1Q15042 981 aa15.09■□□□□ 0.01
TRAPPC9-204ENST00000518723 CERKLQ49MI3 558 aaPredicted RBP15.09■□□□□ 0.01
TRAPPC9-204ENST00000518723 GJC2Q5T442 439 aaPredicted RBP15.09■□□□□ 0.01
TRAPPC9-204ENST00000518723 C1orf53Q5VUE5 145 aa15.09■□□□□ 0.01
TRAPPC9-204ENST00000518723 RPAP3Q9H6T3 665 aaPredicted RBP15.09■□□□□ 0.01
TRAPPC9-204ENST00000518723 PIH1D3Q9NQM4 214 aaKnown RBP15.09■□□□□ 0.01
TRAPPC9-204ENST00000518723 PRDM6Q9NQX0 595 aa15.09■□□□□ 0.01
TRAPPC9-204ENST00000518723 ZNF236Q9UL36 1845 aa15.08■□□□□ 0.01
TRAPPC9-204ENST00000518723 SEPT4O43236 478 aa15.08■□□□□ 0
TRAPPC9-204ENST00000518723 ADORA2AP29274 412 aa15.08■□□□□ 0
TRAPPC9-204ENST00000518723 ABCB5Q2M3G0 1257 aa15.08■□□□□ 0
TRAPPC9-204ENST00000518723 TMED8Q6PL24 325 aaPredicted RBP15.08■□□□□ 0
TRAPPC9-204ENST00000518723 DPP9Q86TI2 863 aa15.08■□□□□ 0
TRAPPC9-204ENST00000518723 SHCBP1Q8NEM2 672 aa15.08■□□□□ 0
TRAPPC9-204ENST00000518723 BADQ92934 168 aa15.08■□□□□ 0
TRAPPC9-204ENST00000518723 TTYH1Q9H313 450 aaPredicted RBP15.08■□□□□ 0
TRAPPC9-204ENST00000518723 PDLIM7Q9NR12 457 aa15.08■□□□□ 0
TRAPPC9-204ENST00000518723 RLFQ13129 1914 aa15.07■□□□□ 0
TRAPPC9-204ENST00000518723 TMEM265A0A087WTH1 108 aa15.07■□□□□ 0
TRAPPC9-204ENST00000518723 ZNF316A6NFI3 1004 aaPredicted RBP15.07■□□□□ 0
TRAPPC9-204ENST00000518723 USP5P45974 858 aa15.07■□□□□ 0
TRAPPC9-204ENST00000518723 POLA2Q14181 598 aa15.07■□□□□ 0
TRAPPC9-204ENST00000518723 TRIM60Q495X7 471 aa15.07■□□□□ 0
TRAPPC9-204ENST00000518723 TTC6Q86TZ1 520 aa15.07■□□□□ 0
TRAPPC9-204ENST00000518723 MYLIPQ8WY64 445 aa15.07■□□□□ 0
TRAPPC9-204ENST00000518723 MOV10L1Q9BXT6 1211 aaKnown RBP15.07■□□□□ 0
TRAPPC9-204ENST00000518723 CABP5Q9NP86 173 aa15.07■□□□□ 0
TRAPPC9-204ENST00000518723 PRDM5Q9NQX1 630 aaPredicted RBP15.07■□□□□ 0
TRAPPC9-204ENST00000518723 HOXC10Q9NYD6 342 aa15.07■□□□□ 0
TRAPPC9-204ENST00000518723 IPO8O15397 1037 aaKnown RBP15.06■□□□□ 0
TRAPPC9-204ENST00000518723 TRIM27P14373 513 aa15.06■□□□□ 0
TRAPPC9-204ENST00000518723 GUCY1A2P33402 732 aa15.06■□□□□ 0
TRAPPC9-204ENST00000518723 SHMT1P34896 483 aa15.06■□□□□ 0
TRAPPC9-204ENST00000518723 COG2Q14746 738 aa15.06■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms