RNA–Protein interactions for RNA: ENST00000518224.1

IGHV3-25-201, Transcript of immunoglobulin heavy variable 3-25 (pseudogene), humanhuman

BASIC

Gene IGHV3-25, Length 351 nt, Biotype IG V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-25-201ENST00000518224 OSBPP22059 807 aa13.6□□□□□ -0.23
IGHV3-25-201ENST00000518224 CDK8P49336 464 aa13.6□□□□□ -0.23
IGHV3-25-201ENST00000518224 USP14P54578 494 aa13.6□□□□□ -0.23
IGHV3-25-201ENST00000518224 POTEEQ6S8J3 1075 aa13.6□□□□□ -0.23
IGHV3-25-201ENST00000518224 TMEM179Q6ZVK1 233 aa13.6□□□□□ -0.23
IGHV3-25-201ENST00000518224 CHD1LQ86WJ1 897 aa13.6□□□□□ -0.23
IGHV3-25-201ENST00000518224 ACER1Q8TDN7 264 aa13.6□□□□□ -0.23
IGHV3-25-201ENST00000518224 EVI5LQ96CN4 794 aa13.6□□□□□ -0.23
IGHV3-25-201ENST00000518224 DYNLL2Q96FJ2 89 aa13.6□□□□□ -0.23
IGHV3-25-201ENST00000518224 ZNF333Q96JL9 665 aa13.6□□□□□ -0.23
IGHV3-25-201ENST00000518224 CABP5Q9NP86 173 aa13.6□□□□□ -0.23
IGHV3-25-201ENST00000518224 TMOD4Q9NZQ9 345 aa13.6□□□□□ -0.23
IGHV3-25-201ENST00000518224 DOCK3Q8IZD9 2030 aa13.59□□□□□ -0.23
IGHV3-25-201ENST00000518224 MYH8P13535 1937 aa13.59□□□□□ -0.23
IGHV3-25-201ENST00000518224 CYP2D7A0A087X1C5 515 aa13.59□□□□□ -0.23
IGHV3-25-201ENST00000518224 A0A1W2PRG0 241 aa13.59□□□□□ -0.23
IGHV3-25-201ENST00000518224 FOXP2O15409 715 aa13.59□□□□□ -0.23
IGHV3-25-201ENST00000518224 SEPT2Q15019 361 aa13.59□□□□□ -0.23
IGHV3-25-201ENST00000518224 LBX2Q6XYB7 198 aa13.59□□□□□ -0.23
IGHV3-25-201ENST00000518224 SMCR8Q8TEV9 937 aaPredicted RBP13.59□□□□□ -0.23
IGHV3-25-201ENST00000518224 DDRGK1Q96HY6 314 aa13.59□□□□□ -0.23
IGHV3-25-201ENST00000518224 LNPKQ9C0E8 428 aa13.59□□□□□ -0.23
IGHV3-25-201ENST00000518224 PATL2C9JE40 543 aaKnown RBP13.58□□□□□ -0.24
IGHV3-25-201ENST00000518224 AKR1B1P15121 316 aa13.58□□□□□ -0.24
IGHV3-25-201ENST00000518224 HOXD10P28358 340 aa13.58□□□□□ -0.24
IGHV3-25-201ENST00000518224 FCGRTP55899 365 aa13.58□□□□□ -0.24
IGHV3-25-201ENST00000518224 HERVK_113P62684 666 aa13.58□□□□□ -0.24
IGHV3-25-201ENST00000518224 RAB3GAP1Q15042 981 aa13.58□□□□□ -0.24
IGHV3-25-201ENST00000518224 PLEKHM2Q8IWE5 1019 aa13.58□□□□□ -0.24
IGHV3-25-201ENST00000518224 AMOTL1Q8IY63 956 aa13.58□□□□□ -0.24
IGHV3-25-201ENST00000518224 ANKRD13CQ8N6S4 541 aa13.58□□□□□ -0.24
IGHV3-25-201ENST00000518224 GTF3C2Q8WUA4 911 aaPredicted RBP13.58□□□□□ -0.24
IGHV3-25-201ENST00000518224 SEC62Q99442 399 aaKnown RBP13.58□□□□□ -0.24
IGHV3-25-201ENST00000518224 P2RX7Q99572 595 aaKnown RBP13.58□□□□□ -0.24
IGHV3-25-201ENST00000518224 FSD1Q9BTV5 496 aa13.58□□□□□ -0.24
IGHV3-25-201ENST00000518224 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.58□□□□□ -0.24
IGHV3-25-201ENST00000518224 ZBTB47Q9UFB7 747 aaPredicted RBP13.58□□□□□ -0.24
IGHV3-25-201ENST00000518224 PDE4DIPQ5VU43 2346 aa13.58□□□□□ -0.24
IGHV3-25-201ENST00000518224 RLFQ13129 1914 aa13.57□□□□□ -0.24
IGHV3-25-201ENST00000518224 VCAM1P19320 739 aa13.57□□□□□ -0.24
IGHV3-25-201ENST00000518224 IRF5Q13568 498 aa13.57□□□□□ -0.24
IGHV3-25-201ENST00000518224 CATSPERGQ6ZRH7 1159 aa13.57□□□□□ -0.24
IGHV3-25-201ENST00000518224 RBPJLQ9UBG7 517 aa13.57□□□□□ -0.24
IGHV3-25-201ENST00000518224 TMX2Q9Y320 296 aa13.57□□□□□ -0.24
IGHV3-25-201ENST00000518224 USP17L15C9J2P7 530 aa13.56□□□□□ -0.24
IGHV3-25-201ENST00000518224 USP17L13C9JLJ4 530 aa13.56□□□□□ -0.24
IGHV3-25-201ENST00000518224 USP17L11C9JVI0 530 aa13.56□□□□□ -0.24
IGHV3-25-201ENST00000518224 USP17L18D6R9N7 530 aa13.56□□□□□ -0.24
IGHV3-25-201ENST00000518224 USP17L22D6RA61 530 aa13.56□□□□□ -0.24
IGHV3-25-201ENST00000518224 USP17L17D6RBQ6 530 aa13.56□□□□□ -0.24
IGHV3-25-201ENST00000518224 USP17L19D6RCP7 530 aa13.56□□□□□ -0.24
IGHV3-25-201ENST00000518224 USP17L20D6RJB6 530 aa13.56□□□□□ -0.24
IGHV3-25-201ENST00000518224 FMNL1O95466 1100 aaPredicted RBP13.56□□□□□ -0.24
IGHV3-25-201ENST00000518224 RASA1P20936 1047 aa13.56□□□□□ -0.24
IGHV3-25-201ENST00000518224 SOX10P56693 466 aa13.56□□□□□ -0.24
IGHV3-25-201ENST00000518224 IRX3P78415 501 aaPredicted RBP13.56□□□□□ -0.24
IGHV3-25-201ENST00000518224 PRKCZQ05513 592 aa13.56□□□□□ -0.24
IGHV3-25-201ENST00000518224 USP17L24Q0WX57 530 aa13.56□□□□□ -0.24
IGHV3-25-201ENST00000518224 SLC9C1Q4G0N8 1177 aa13.56□□□□□ -0.24
IGHV3-25-201ENST00000518224 NBPF11Q86T75 865 aa13.56□□□□□ -0.24
IGHV3-25-201ENST00000518224 IFNL3Q8IZI9 196 aa13.56□□□□□ -0.24
IGHV3-25-201ENST00000518224 TXNRD2Q9NNW7 524 aa13.56□□□□□ -0.24
IGHV3-25-201ENST00000518224 HELLSQ9NRZ9 838 aa13.56□□□□□ -0.24
IGHV3-25-201ENST00000518224 GJD2Q9UKL4 321 aa13.56□□□□□ -0.24
IGHV3-25-201ENST00000518224 MYPNQ86TC9 1320 aa13.56□□□□□ -0.24
IGHV3-25-201ENST00000518224 IGKV6D-41A0A0C4DH26 115 aa13.55□□□□□ -0.24
IGHV3-25-201ENST00000518224 MLLT1Q03111 559 aaPredicted RBP13.55□□□□□ -0.24
IGHV3-25-201ENST00000518224 ALX1Q15699 326 aa13.55□□□□□ -0.24
IGHV3-25-201ENST00000518224 KIAA1755Q5JYT7 1200 aa13.55□□□□□ -0.24
IGHV3-25-201ENST00000518224 PXYLP1Q8TE99 480 aa13.55□□□□□ -0.24
IGHV3-25-201ENST00000518224 LPAR1Q92633 364 aa13.55□□□□□ -0.24
IGHV3-25-201ENST00000518224 FEZ1Q99689 392 aa13.55□□□□□ -0.24
IGHV3-25-201ENST00000518224 KANSL2Q9H9L4 492 aa13.55□□□□□ -0.24
IGHV3-25-201ENST00000518224 GABRQQ9UN88 632 aa13.55□□□□□ -0.24
IGHV3-25-201ENST00000518224 RABGAP1Q9Y3P9 1069 aa13.55□□□□□ -0.24
IGHV3-25-201ENST00000518224 PLIN4Q96Q06 1357 aa13.55□□□□□ -0.24
IGHV3-25-201ENST00000518224 PLXNB2O15031 1838 aa13.55□□□□□ -0.24
IGHV3-25-201ENST00000518224 A0A0G2JMZ2 1700 aa13.54□□□□□ -0.24
IGHV3-25-201ENST00000518224 CNMDO75829 334 aa13.54□□□□□ -0.24
IGHV3-25-201ENST00000518224 ICA1Q05084 483 aa13.54□□□□□ -0.24
IGHV3-25-201ENST00000518224 B4GALNT3Q6L9W6 998 aa13.54□□□□□ -0.24
IGHV3-25-201ENST00000518224 GPRC5AQ8NFJ5 357 aa13.54□□□□□ -0.24
IGHV3-25-201ENST00000518224 NACAP1Q9BZK3 213 aa13.54□□□□□ -0.24
IGHV3-25-201ENST00000518224 VCPKMTQ9H867 229 aa13.54□□□□□ -0.24
IGHV3-25-201ENST00000518224 ANAPC4Q9UJX5 808 aa13.54□□□□□ -0.24
IGHV3-25-201ENST00000518224 SYNPO2Q9UMS6 1093 aa13.54□□□□□ -0.24
IGHV3-25-201ENST00000518224 PARP14Q460N5 1801 aa13.53□□□□□ -0.24
IGHV3-25-201ENST00000518224 A0A0D9SFI3 127 aa13.53□□□□□ -0.24
IGHV3-25-201ENST00000518224 POTEFA5A3E0 1075 aa13.53□□□□□ -0.24
IGHV3-25-201ENST00000518224 SPDYE16A6NNV3 312 aaPredicted RBP13.53□□□□□ -0.24
IGHV3-25-201ENST00000518224 MPHOSPH10O00566 681 aaKnown RBP13.53□□□□□ -0.24
IGHV3-25-201ENST00000518224 TNPO2O14787 897 aaKnown RBP13.53□□□□□ -0.24
IGHV3-25-201ENST00000518224 FGRP09769 529 aa13.53□□□□□ -0.24
IGHV3-25-201ENST00000518224 GRK4P32298 578 aa13.53□□□□□ -0.24
IGHV3-25-201ENST00000518224 FLT3LGP49771 235 aa13.53□□□□□ -0.24
IGHV3-25-201ENST00000518224 ERVK-9P63128 1117 aa13.53□□□□□ -0.24
IGHV3-25-201ENST00000518224 ERVK-24P63145 666 aa13.53□□□□□ -0.24
IGHV3-25-201ENST00000518224 Q3C1V9 767 aa13.53□□□□□ -0.24
IGHV3-25-201ENST00000518224 CLEC10AQ8IUN9 316 aa13.53□□□□□ -0.24
IGHV3-25-201ENST00000518224 SLAIN1Q8ND83 568 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms