RNA–Protein interactions for RNA: ENST00000517980.5

CTNNA1-206, Transcript of catenin alpha 1, humanhuman

TSL 4

Gene CTNNA1, Length 696 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-206ENST00000517980 HTATIP2Q9BUP3 242 aa20.96■□□□□ 0.95
CTNNA1-206ENST00000517980 XRN2Q9H0D6 950 aaKnown RBP eCLIP20.96■□□□□ 0.95
CTNNA1-206ENST00000517980 ARMT1Q9H993 441 aa20.96■□□□□ 0.95
CTNNA1-206ENST00000517980 PRKAB2O43741 272 aa20.95■□□□□ 0.94
CTNNA1-206ENST00000517980 HMGCRP04035 888 aa20.95■□□□□ 0.94
CTNNA1-206ENST00000517980 SEPT2Q15019 361 aa20.95■□□□□ 0.94
CTNNA1-206ENST00000517980 TMED8Q6PL24 325 aaPredicted RBP20.95■□□□□ 0.94
CTNNA1-206ENST00000517980 CHRDL2Q6WN34 429 aa20.95■□□□□ 0.94
CTNNA1-206ENST00000517980 CCAR1Q8IX12 1150 aaKnown RBP20.95■□□□□ 0.94
CTNNA1-206ENST00000517980 TRIB2Q92519 343 aa20.95■□□□□ 0.94
CTNNA1-206ENST00000517980 PAWRQ96IZ0 340 aaKnown RBP20.95■□□□□ 0.94
CTNNA1-206ENST00000517980 NUDT12Q9BQG2 462 aa20.95■□□□□ 0.94
CTNNA1-206ENST00000517980 PAG1Q9NWQ8 432 aa20.95■□□□□ 0.94
CTNNA1-206ENST00000517980 NAV1Q8NEY1 1877 aa20.94■□□□□ 0.94
CTNNA1-206ENST00000517980 BAZ2AQ9UIF9 1905 aaKnown RBP20.94■□□□□ 0.94
CTNNA1-206ENST00000517980 TRIOBPQ9H2D6 2365 aa20.94■□□□□ 0.94
CTNNA1-206ENST00000517980 USP17L15C9J2P7 530 aa20.94■□□□□ 0.94
CTNNA1-206ENST00000517980 USP17L13C9JLJ4 530 aa20.94■□□□□ 0.94
CTNNA1-206ENST00000517980 USP17L11C9JVI0 530 aa20.94■□□□□ 0.94
CTNNA1-206ENST00000517980 USP17L18D6R9N7 530 aa20.94■□□□□ 0.94
CTNNA1-206ENST00000517980 USP17L22D6RA61 530 aa20.94■□□□□ 0.94
CTNNA1-206ENST00000517980 USP17L17D6RBQ6 530 aa20.94■□□□□ 0.94
CTNNA1-206ENST00000517980 USP17L19D6RCP7 530 aa20.94■□□□□ 0.94
CTNNA1-206ENST00000517980 USP17L20D6RJB6 530 aa20.94■□□□□ 0.94
CTNNA1-206ENST00000517980 MPHOSPH10O00566 681 aaKnown RBP20.94■□□□□ 0.94
CTNNA1-206ENST00000517980 GABPAQ06546 454 aa20.94■□□□□ 0.94
CTNNA1-206ENST00000517980 USP17L24Q0WX57 530 aa20.94■□□□□ 0.94
CTNNA1-206ENST00000517980 CATSPERGQ6ZRH7 1159 aa20.94■□□□□ 0.94
CTNNA1-206ENST00000517980 SLC44A5Q8NCS7 719 aa20.94■□□□□ 0.94
CTNNA1-206ENST00000517980 DYNLL2Q96FJ2 89 aa20.94■□□□□ 0.94
CTNNA1-206ENST00000517980 CRISPLD2Q9H0B8 497 aa20.94■□□□□ 0.94
CTNNA1-206ENST00000517980 HMX1Q9NP08 348 aaPredicted RBP20.94■□□□□ 0.94
CTNNA1-206ENST00000517980 DCP1AQ9NPI6 582 aaPredicted RBP20.94■□□□□ 0.94
CTNNA1-206ENST00000517980 SMIM22K7EJ46 135 aa20.93■□□□□ 0.94
CTNNA1-206ENST00000517980 CNMDO75829 334 aa20.93■□□□□ 0.94
CTNNA1-206ENST00000517980 ATP5JP18859 108 aa20.93■□□□□ 0.94
CTNNA1-206ENST00000517980 FXR1P51114 621 aaKnown RBP eCLIP20.93■□□□□ 0.942e-6■■■□□ 17.9
CTNNA1-206ENST00000517980 DIS3LQ8TF46 1054 aaKnown RBP20.93■□□□□ 0.94
CTNNA1-206ENST00000517980 KIAA1683Q9H0B3 1180 aa20.93■□□□□ 0.94
CTNNA1-206ENST00000517980 RPTORQ8N122 1335 aa20.93■□□□□ 0.94
CTNNA1-206ENST00000517980 MAPK4P31152 587 aa20.92■□□□□ 0.94
CTNNA1-206ENST00000517980 ADD2P35612 726 aa20.92■□□□□ 0.94
CTNNA1-206ENST00000517980 USP14P54578 494 aa20.92■□□□□ 0.94
CTNNA1-206ENST00000517980 CCL14Q16627 93 aa20.92■□□□□ 0.94
CTNNA1-206ENST00000517980 GPR142Q7Z601 462 aa20.92■□□□□ 0.94
CTNNA1-206ENST00000517980 PLEKHH3Q7Z736 793 aa20.92■□□□□ 0.94
CTNNA1-206ENST00000517980 C12orf42Q96LP6 360 aa20.92■□□□□ 0.94
CTNNA1-206ENST00000517980 CHMP4BQ9H444 224 aaKnown RBP20.92■□□□□ 0.94
CTNNA1-206ENST00000517980 CYP2D7A0A087X1C5 515 aa20.91■□□□□ 0.94
CTNNA1-206ENST00000517980 A0A1W2PRG0 241 aa20.91■□□□□ 0.94
CTNNA1-206ENST00000517980 MBD4O95243 580 aa20.91■□□□□ 0.94
CTNNA1-206ENST00000517980 VCAM1P19320 739 aa20.91■□□□□ 0.94
CTNNA1-206ENST00000517980 PDE3AQ14432 1141 aa20.91■□□□□ 0.94
CTNNA1-206ENST00000517980 HAUS7Q99871 368 aa20.91■□□□□ 0.94
CTNNA1-206ENST00000517980 RPAP3Q9H6T3 665 aaPredicted RBP20.91■□□□□ 0.94
CTNNA1-206ENST00000517980 CWC22Q9HCG8 908 aaKnown RBP20.91■□□□□ 0.94
CTNNA1-206ENST00000517980 RBM27Q9P2N5 1060 aaKnown RBP20.91■□□□□ 0.94
CTNNA1-206ENST00000517980 RABGAP1Q9Y3P9 1069 aa20.91■□□□□ 0.94
CTNNA1-206ENST00000517980 NR2E3Q9Y5X4 410 aa20.91■□□□□ 0.94
CTNNA1-206ENST00000517980 EVI5O60447 810 aa20.9■□□□□ 0.94
CTNNA1-206ENST00000517980 MORN1Q5T089 497 aa20.9■□□□□ 0.94
CTNNA1-206ENST00000517980 WDR78Q5VTH9 848 aa20.9■□□□□ 0.94
CTNNA1-206ENST00000517980 USP6NLQ92738 828 aa20.9■□□□□ 0.94
CTNNA1-206ENST00000517980 LRRCC1Q9C099 1032 aa20.9■□□□□ 0.94
CTNNA1-206ENST00000517980 BTBD7Q9P203 1132 aa20.9■□□□□ 0.94
CTNNA1-206ENST00000517980 ALPK3Q96L96 1907 aa20.9■□□□□ 0.94
CTNNA1-206ENST00000517980 MYH8P13535 1937 aa20.89■□□□□ 0.93
CTNNA1-206ENST00000517980 XRCC5P13010 732 aaKnown RBP20.89■□□□□ 0.93
CTNNA1-206ENST00000517980 PRKAR2AP13861 404 aaKnown RBP20.89■□□□□ 0.93
CTNNA1-206ENST00000517980 CACNB2Q08289 660 aaPredicted RBP20.89■□□□□ 0.93
CTNNA1-206ENST00000517980 KIAA1755Q5JYT7 1200 aa20.89■□□□□ 0.93
CTNNA1-206ENST00000517980 NECAB2Q7Z6G3 386 aa20.89■□□□□ 0.93
CTNNA1-206ENST00000517980 GTF3C2Q8WUA4 911 aaPredicted RBP20.89■□□□□ 0.93
CTNNA1-206ENST00000517980 DDX60LQ5H9U9 1706 aaKnown RBP20.89■□□□□ 0.93
CTNNA1-206ENST00000517980 MYH7P12883 1935 aa20.88■□□□□ 0.93
CTNNA1-206ENST00000517980 CLEC10AQ8IUN9 316 aa20.88■□□□□ 0.93
CTNNA1-206ENST00000517980 SOCS4Q8WXH5 440 aa20.88■□□□□ 0.93
CTNNA1-206ENST00000517980 DDX24Q9GZR7 859 aaKnown RBP eCLIP20.88■□□□□ 0.93
CTNNA1-206ENST00000517980 USP17L12C9JPN9 530 aa20.87■□□□□ 0.93
CTNNA1-206ENST00000517980 USP17L21D6R901 530 aa20.87■□□□□ 0.93
CTNNA1-206ENST00000517980 AKR1B1P15121 316 aa20.87■□□□□ 0.93
CTNNA1-206ENST00000517980 ZKSCAN1P17029 563 aaPredicted RBP20.87■□□□□ 0.93
CTNNA1-206ENST00000517980 CCND3P30281 292 aaPredicted RBP20.87■□□□□ 0.93
CTNNA1-206ENST00000517980 RGS2P41220 211 aa20.87■□□□□ 0.93
CTNNA1-206ENST00000517980 MNX1P50219 401 aaPredicted RBP20.87■□□□□ 0.93
CTNNA1-206ENST00000517980 MAP3K21Q5TCX8 1036 aa20.87■□□□□ 0.93
CTNNA1-206ENST00000517980 SIAH1Q8IUQ4 282 aa20.87■□□□□ 0.93
CTNNA1-206ENST00000517980 ATP8A2Q9NTI2 1148 aa20.87■□□□□ 0.93
CTNNA1-206ENST00000517980 SPDYE16A6NNV3 312 aaPredicted RBP20.86■□□□□ 0.93
CTNNA1-206ENST00000517980 CAPN2P17655 700 aa20.86■□□□□ 0.93
CTNNA1-206ENST00000517980 MAP2K5Q13163 448 aa20.86■□□□□ 0.93
CTNNA1-206ENST00000517980 PUS7LQ9H0K6 701 aaKnown RBP20.86■□□□□ 0.93
CTNNA1-206ENST00000517980 SLC4A4Q9Y6R1 1079 aa20.86■□□□□ 0.93
CTNNA1-206ENST00000517980 PTPREP23469 700 aa20.85■□□□□ 0.93
CTNNA1-206ENST00000517980 CDK8P49336 464 aa20.85■□□□□ 0.93
CTNNA1-206ENST00000517980 CCNA1P78396 465 aa20.85■□□□□ 0.93
CTNNA1-206ENST00000517980 COG2Q14746 738 aa20.85■□□□□ 0.93
CTNNA1-206ENST00000517980 C12orf60Q5U649 245 aa20.85■□□□□ 0.93
CTNNA1-206ENST00000517980 SAMD1Q6SPF0 538 aaPredicted RBP20.85■□□□□ 0.93
CTNNA1-206ENST00000517980 FLRT1Q9NZU1 646 aa20.85■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms