RNA–Protein interactions for RNA: ENST00000517732.5

LINCR-0001-201, humanhuman

TSL 4 BASIC

Gene LINCR-0001, Length 562 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINCR-0001-201ENST00000517732 PI16Q6UXB8 463 aa11.12□□□□□ -0.63
LINCR-0001-201ENST00000517732 MEIS3Q99687 375 aa11.12□□□□□ -0.63
LINCR-0001-201ENST00000517732 NOB1Q9ULX3 412 aaKnown RBP11.12□□□□□ -0.63
LINCR-0001-201ENST00000517732 ZNF236Q9UL36 1845 aa11.12□□□□□ -0.63
LINCR-0001-201ENST00000517732 FLT1P17948 1338 aa11.11□□□□□ -0.63
LINCR-0001-201ENST00000517732 KBTBD13C9JR72 458 aa11.11□□□□□ -0.63
LINCR-0001-201ENST00000517732 IGSF3O75054 1194 aa11.11□□□□□ -0.63
LINCR-0001-201ENST00000517732 CT47B1P0C2W7 299 aaPredicted RBP11.11□□□□□ -0.63
LINCR-0001-201ENST00000517732 MCAMP43121 646 aa11.11□□□□□ -0.63
LINCR-0001-201ENST00000517732 RTP1P59025 263 aa11.11□□□□□ -0.63
LINCR-0001-201ENST00000517732 SLFN5Q08AF3 891 aa11.11□□□□□ -0.63
LINCR-0001-201ENST00000517732 ZYXQ15942 572 aaKnown RBP11.11□□□□□ -0.63
LINCR-0001-201ENST00000517732 CCDC158Q5M9N0 1113 aa11.11□□□□□ -0.63
LINCR-0001-201ENST00000517732 TTC39AQ5SRH9 613 aa11.11□□□□□ -0.63
LINCR-0001-201ENST00000517732 ARRDC4Q8NCT1 418 aa11.11□□□□□ -0.63
LINCR-0001-201ENST00000517732 MAFAQ8NHW3 353 aaPredicted RBP11.11□□□□□ -0.63
LINCR-0001-201ENST00000517732 DNAJC18Q9H819 358 aa11.11□□□□□ -0.63
LINCR-0001-201ENST00000517732 PRDM5Q9NQX1 630 aaPredicted RBP11.11□□□□□ -0.63
LINCR-0001-201ENST00000517732 EMILIN3Q9NT22 766 aa11.11□□□□□ -0.63
LINCR-0001-201ENST00000517732 PALD1Q9ULE6 856 aa11.11□□□□□ -0.63
LINCR-0001-201ENST00000517732 ATP11BQ9Y2G3 1177 aa11.11□□□□□ -0.63
LINCR-0001-201ENST00000517732 NAV1Q8NEY1 1877 aa11.1□□□□□ -0.63
LINCR-0001-201ENST00000517732 PTPREP23469 700 aa11.1□□□□□ -0.63
LINCR-0001-201ENST00000517732 PPP4CP60510 307 aa11.1□□□□□ -0.63
LINCR-0001-201ENST00000517732 MTX1Q13505 466 aa11.1□□□□□ -0.63
LINCR-0001-201ENST00000517732 METTL16Q86W50 562 aaKnown RBP11.1□□□□□ -0.63
LINCR-0001-201ENST00000517732 CERS3Q8IU89 383 aa11.1□□□□□ -0.63
LINCR-0001-201ENST00000517732 SYMPKQ92797 1274 aaKnown RBP11.1□□□□□ -0.63
LINCR-0001-201ENST00000517732 C12orf42Q96LP6 360 aa11.1□□□□□ -0.63
LINCR-0001-201ENST00000517732 CDX2Q99626 313 aaPredicted RBP11.1□□□□□ -0.63
LINCR-0001-201ENST00000517732 SAP30BPQ9UHR5 308 aaKnown RBP11.1□□□□□ -0.63
LINCR-0001-201ENST00000517732 NDUFB9Q9Y6M9 179 aa11.1□□□□□ -0.63
LINCR-0001-201ENST00000517732 GH2P01242 217 aa11.09□□□□□ -0.63
LINCR-0001-201ENST00000517732 HOXC6P09630 235 aa11.09□□□□□ -0.63
LINCR-0001-201ENST00000517732 USP5P45974 858 aa11.09□□□□□ -0.63
LINCR-0001-201ENST00000517732 JAG1P78504 1218 aa11.09□□□□□ -0.63
LINCR-0001-201ENST00000517732 DPP9Q86TI2 863 aa11.09□□□□□ -0.63
LINCR-0001-201ENST00000517732 CABP5Q9NP86 173 aa11.09□□□□□ -0.63
LINCR-0001-201ENST00000517732 SLC5A4Q9NY91 659 aa11.09□□□□□ -0.63
LINCR-0001-201ENST00000517732 FLRT1Q9NZU1 646 aa11.09□□□□□ -0.63
LINCR-0001-201ENST00000517732 PLXNA1Q9UIW2 1896 aa11.08□□□□□ -0.64
LINCR-0001-201ENST00000517732 SMCHD1A6NHR9 2005 aa11.08□□□□□ -0.64
LINCR-0001-201ENST00000517732 FOSL2P15408 326 aa11.08□□□□□ -0.64
LINCR-0001-201ENST00000517732 CYP2C19P33261 490 aa11.08□□□□□ -0.64
LINCR-0001-201ENST00000517732 SMAD3P84022 425 aaKnown RBP11.08□□□□□ -0.64
LINCR-0001-201ENST00000517732 OS9Q13438 667 aaPredicted RBP11.08□□□□□ -0.64
LINCR-0001-201ENST00000517732 POLA2Q14181 598 aa11.08□□□□□ -0.64
LINCR-0001-201ENST00000517732 GRB14Q14449 540 aa11.08□□□□□ -0.64
LINCR-0001-201ENST00000517732 RAB3GAP1Q15042 981 aa11.08□□□□□ -0.64
LINCR-0001-201ENST00000517732 SHHQ15465 462 aa11.08□□□□□ -0.64
LINCR-0001-201ENST00000517732 GJC2Q5T442 439 aaPredicted RBP11.08□□□□□ -0.64
LINCR-0001-201ENST00000517732 CATSPERGQ6ZRH7 1159 aa11.08□□□□□ -0.64
LINCR-0001-201ENST00000517732 SEMA6BQ9H3T3 888 aa11.08□□□□□ -0.64
LINCR-0001-201ENST00000517732 SNRKQ9NRH2 765 aa11.08□□□□□ -0.64
LINCR-0001-201ENST00000517732 A0A0G2JMZ2 1700 aa11.07□□□□□ -0.64
LINCR-0001-201ENST00000517732 STRNO43815 780 aa11.07□□□□□ -0.64
LINCR-0001-201ENST00000517732 CNMDO75829 334 aa11.07□□□□□ -0.64
LINCR-0001-201ENST00000517732 GNAI2P04899 355 aa11.07□□□□□ -0.64
LINCR-0001-201ENST00000517732 CYBAP13498 195 aa11.07□□□□□ -0.64
LINCR-0001-201ENST00000517732 VCAM1P19320 739 aa11.07□□□□□ -0.64
LINCR-0001-201ENST00000517732 ABCB5Q2M3G0 1257 aa11.07□□□□□ -0.64
LINCR-0001-201ENST00000517732 SHROOM1Q2M3G4 852 aaPredicted RBP11.07□□□□□ -0.64
LINCR-0001-201ENST00000517732 CERKLQ49MI3 558 aaPredicted RBP11.07□□□□□ -0.64
LINCR-0001-201ENST00000517732 LBX2Q6XYB7 198 aa11.07□□□□□ -0.64
LINCR-0001-201ENST00000517732 SLC39A5Q6ZMH5 540 aa11.07□□□□□ -0.64
LINCR-0001-201ENST00000517732 TTC6Q86TZ1 520 aa11.07□□□□□ -0.64
LINCR-0001-201ENST00000517732 NPLOC4Q8TAT6 608 aa11.07□□□□□ -0.64
LINCR-0001-201ENST00000517732 MYLIPQ8WY64 445 aa11.07□□□□□ -0.64
LINCR-0001-201ENST00000517732 KIAA1683Q9H0B3 1180 aa11.07□□□□□ -0.64
LINCR-0001-201ENST00000517732 PRDM6Q9NQX0 595 aa11.07□□□□□ -0.64
LINCR-0001-201ENST00000517732 SERPINB13Q9UIV8 391 aa11.07□□□□□ -0.64
LINCR-0001-201ENST00000517732 MYO9BQ13459 2157 aa11.06□□□□□ -0.64
LINCR-0001-201ENST00000517732 TMEM265A0A087WTH1 108 aa11.06□□□□□ -0.64
LINCR-0001-201ENST00000517732 SPDYE16A6NNV3 312 aaPredicted RBP11.06□□□□□ -0.64
LINCR-0001-201ENST00000517732 SEPT4O43236 478 aa11.06□□□□□ -0.64
LINCR-0001-201ENST00000517732 CYP7A1P22680 504 aa11.06□□□□□ -0.64
LINCR-0001-201ENST00000517732 TRIM60Q495X7 471 aa11.06□□□□□ -0.64
LINCR-0001-201ENST00000517732 C9orf50Q5SZB4 431 aa11.06□□□□□ -0.64
LINCR-0001-201ENST00000517732 OLFML2BQ68BL8 750 aa11.06□□□□□ -0.64
LINCR-0001-201ENST00000517732 TATDN1Q6P1N9 297 aa11.06□□□□□ -0.64
LINCR-0001-201ENST00000517732 ADGRA1Q86SQ6 560 aa11.06□□□□□ -0.64
LINCR-0001-201ENST00000517732 ARHGAP45Q92619 1136 aa11.06□□□□□ -0.64
LINCR-0001-201ENST00000517732 BADQ92934 168 aa11.06□□□□□ -0.64
LINCR-0001-201ENST00000517732 EHD4Q9H223 541 aa11.06□□□□□ -0.64
LINCR-0001-201ENST00000517732 RPAP3Q9H6T3 665 aaPredicted RBP11.06□□□□□ -0.64
LINCR-0001-201ENST00000517732 GPR108Q9NPR9 543 aa11.06□□□□□ -0.64
LINCR-0001-201ENST00000517732 BTBD7Q9P203 1132 aa11.06□□□□□ -0.64
LINCR-0001-201ENST00000517732 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP11.06□□□□□ -0.64
LINCR-0001-201ENST00000517732 COL11A1P12107 1806 aaPredicted RBP11.06□□□□□ -0.64
LINCR-0001-201ENST00000517732 PARP14Q460N5 1801 aa11.06□□□□□ -0.64
LINCR-0001-201ENST00000517732 A0A0C4DFX4 3053 aa11.06□□□□□ -0.64
LINCR-0001-201ENST00000517732 IPO8O15397 1037 aaKnown RBP11.05□□□□□ -0.64
LINCR-0001-201ENST00000517732 CYP2E1P05181 493 aaPredicted RBP11.05□□□□□ -0.64
LINCR-0001-201ENST00000517732 ADORA2AP29274 412 aa11.05□□□□□ -0.64
LINCR-0001-201ENST00000517732 DYNLL1P63167 89 aaKnown RBP11.05□□□□□ -0.64
LINCR-0001-201ENST00000517732 TNNI3KQ59H18 835 aa11.05□□□□□ -0.64
LINCR-0001-201ENST00000517732 POTEEQ6S8J3 1075 aa11.05□□□□□ -0.64
LINCR-0001-201ENST00000517732 SHCBP1Q8NEM2 672 aa11.05□□□□□ -0.64
LINCR-0001-201ENST00000517732 CDCA7LQ96GN5 454 aa11.05□□□□□ -0.64
LINCR-0001-201ENST00000517732 RNPC3Q96LT9 517 aaKnown RBP11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms