RNA–Protein interactions for RNA: ENST00000517693.5

SPIDR-203, Transcript of scaffold protein involved in DNA repair, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SPIDR, Length 1,848 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-203ENST00000517693 TFIP11Q9UBB9 837 aaKnown RBP13.64□□□□□ -0.23
SPIDR-203ENST00000517693 SMIM22K7EJ46 135 aa13.63□□□□□ -0.23
SPIDR-203ENST00000517693 STK38Q15208 465 aa13.63□□□□□ -0.23
SPIDR-203ENST00000517693 SF3A1Q15459 793 aaKnown RBP13.63□□□□□ -0.23
SPIDR-203ENST00000517693 SLC4A8Q2Y0W8 1093 aa13.63□□□□□ -0.23
SPIDR-203ENST00000517693 DALRD3Q5D0E6 543 aaKnown RBP13.63□□□□□ -0.23
SPIDR-203ENST00000517693 NIM1KQ8IY84 436 aa13.63□□□□□ -0.23
SPIDR-203ENST00000517693 CCDC17Q96LX7 622 aa13.63□□□□□ -0.23
SPIDR-203ENST00000517693 PDGFDQ9GZP0 370 aaPredicted RBP13.63□□□□□ -0.23
SPIDR-203ENST00000517693 COL2A1P02458 1487 aaPredicted RBP13.63□□□□□ -0.23
SPIDR-203ENST00000517693 ZNF646O15015 1829 aaPredicted RBP13.63□□□□□ -0.23
SPIDR-203ENST00000517693 PPFIA3O75145 1194 aa13.62□□□□□ -0.23
SPIDR-203ENST00000517693 TOP1P11387 765 aaKnown RBP13.62□□□□□ -0.23
SPIDR-203ENST00000517693 NASPP49321 788 aaPredicted RBP13.62□□□□□ -0.23
SPIDR-203ENST00000517693 GABPAQ06546 454 aa13.62□□□□□ -0.23
SPIDR-203ENST00000517693 RCSD1Q6JBY9 416 aa13.62□□□□□ -0.23
SPIDR-203ENST00000517693 CCDC73Q6ZRK6 1079 aa13.62□□□□□ -0.23
SPIDR-203ENST00000517693 USP28Q96RU2 1077 aa13.62□□□□□ -0.23
SPIDR-203ENST00000517693 TRIM34Q9BYJ4 488 aa13.62□□□□□ -0.23
SPIDR-203ENST00000517693 STX8Q9UNK0 236 aa13.62□□□□□ -0.23
SPIDR-203ENST00000517693 MYH6P13533 1939 aa13.62□□□□□ -0.23
SPIDR-203ENST00000517693 SYCE3A1L190 88 aa13.62□□□□□ -0.23
SPIDR-203ENST00000517693 KCNA3P22001 575 aa13.62□□□□□ -0.23
SPIDR-203ENST00000517693 GRM4Q14833 912 aa13.62□□□□□ -0.23
SPIDR-203ENST00000517693 RSBN1LQ6PCB5 846 aaPredicted RBP13.62□□□□□ -0.23
SPIDR-203ENST00000517693 NOSTRINQ8IVI9 506 aa13.62□□□□□ -0.23
SPIDR-203ENST00000517693 OGFOD1Q8N543 542 aa13.62□□□□□ -0.23
SPIDR-203ENST00000517693 IL17RBQ9NRM6 502 aa13.62□□□□□ -0.23
SPIDR-203ENST00000517693 CEP131Q9UPN4 1083 aa13.62□□□□□ -0.23
SPIDR-203ENST00000517693 CD2APQ9Y5K6 639 aa13.62□□□□□ -0.23
SPIDR-203ENST00000517693 SCN9AQ15858 1988 aa13.62□□□□□ -0.23
SPIDR-203ENST00000517693 MYH8P13535 1937 aa13.61□□□□□ -0.23
SPIDR-203ENST00000517693 CNTNAP5Q8WYK1 1306 aa13.61□□□□□ -0.23
SPIDR-203ENST00000517693 NMT2O60551 498 aa13.61□□□□□ -0.23
SPIDR-203ENST00000517693 ENTPD3O75355 529 aa13.61□□□□□ -0.23
SPIDR-203ENST00000517693 ZBTB7AO95365 584 aa13.61□□□□□ -0.23
SPIDR-203ENST00000517693 SMARCA1P28370 1054 aa13.61□□□□□ -0.23
SPIDR-203ENST00000517693 ME1P48163 572 aa13.61□□□□□ -0.23
SPIDR-203ENST00000517693 RILPL1Q5EBL4 403 aa13.61□□□□□ -0.23
SPIDR-203ENST00000517693 ANO1Q5XXA6 986 aa13.61□□□□□ -0.23
SPIDR-203ENST00000517693 OTUD7BQ6GQQ9 843 aa13.61□□□□□ -0.23
SPIDR-203ENST00000517693 MXD3Q9BW11 206 aa13.61□□□□□ -0.23
SPIDR-203ENST00000517693 NUP62CLQ9H1M0 184 aa13.61□□□□□ -0.23
SPIDR-203ENST00000517693 TSPY26PQ9H489 355 aa13.61□□□□□ -0.23
SPIDR-203ENST00000517693 SH3GLB2Q9NR46 395 aa13.61□□□□□ -0.23
SPIDR-203ENST00000517693 A0A1W2PQ27 194 aa13.6□□□□□ -0.23
SPIDR-203ENST00000517693 A0A1W2PQ64 194 aa13.6□□□□□ -0.23
SPIDR-203ENST00000517693 A0A1W2PQD8 194 aa13.6□□□□□ -0.23
SPIDR-203ENST00000517693 CTAGE5O15320 804 aa13.6□□□□□ -0.23
SPIDR-203ENST00000517693 BMP15O95972 392 aa13.6□□□□□ -0.23
SPIDR-203ENST00000517693 CALML3P27482 149 aa13.6□□□□□ -0.23
SPIDR-203ENST00000517693 KRT2P35908 639 aa13.6□□□□□ -0.23
SPIDR-203ENST00000517693 NOVP48745 357 aa13.6□□□□□ -0.23
SPIDR-203ENST00000517693 EVX2Q03828 476 aa13.6□□□□□ -0.23
SPIDR-203ENST00000517693 FUT2Q10981 343 aa13.6□□□□□ -0.23
SPIDR-203ENST00000517693 DIS3L2Q8IYB7 885 aaKnown RBP13.6□□□□□ -0.23
SPIDR-203ENST00000517693 LINC00301Q8NCQ3 95 aa13.6□□□□□ -0.23
SPIDR-203ENST00000517693 SLC44A5Q8NCS7 719 aa13.6□□□□□ -0.23
SPIDR-203ENST00000517693 AGBL3Q8NEM8 1001 aa13.6□□□□□ -0.23
SPIDR-203ENST00000517693 CCDC148Q8NFR7 591 aa13.6□□□□□ -0.23
SPIDR-203ENST00000517693 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.6□□□□□ -0.23
SPIDR-203ENST00000517693 PI4KBQ9UBF8 816 aa13.6□□□□□ -0.23
SPIDR-203ENST00000517693 ZNRF3Q9ULT6 936 aa13.6□□□□□ -0.23
SPIDR-203ENST00000517693 SPTLC2O15270 562 aa13.6□□□□□ -0.23
SPIDR-203ENST00000517693 PPP6R2O75170 966 aa13.6□□□□□ -0.23
SPIDR-203ENST00000517693 PLEKHA8P1O95397 391 aa13.6□□□□□ -0.23
SPIDR-203ENST00000517693 VIL1P09327 827 aaKnown RBP13.6□□□□□ -0.23
SPIDR-203ENST00000517693 SCG2P13521 617 aa13.6□□□□□ -0.23
SPIDR-203ENST00000517693 ADALQ6DHV7 355 aa13.6□□□□□ -0.23
SPIDR-203ENST00000517693 CCDC82Q8N4S0 544 aa13.6□□□□□ -0.23
SPIDR-203ENST00000517693 CCDC12Q8WUD4 166 aaPredicted RBP13.6□□□□□ -0.23
SPIDR-203ENST00000517693 AIFM3Q96NN9 605 aa13.6□□□□□ -0.23
SPIDR-203ENST00000517693 TMEM47Q9BQJ4 181 aa13.6□□□□□ -0.23
SPIDR-203ENST00000517693 TAOK3Q9H2K8 898 aa13.6□□□□□ -0.23
SPIDR-203ENST00000517693 DDX4Q9NQI0 724 aaKnown RBP13.6□□□□□ -0.23
SPIDR-203ENST00000517693 NOL7Q9UMY1 257 aaKnown RBP13.6□□□□□ -0.23
SPIDR-203ENST00000517693 KIF28PB7ZC32 967 aa13.59□□□□□ -0.23
SPIDR-203ENST00000517693 PARP1P09874 1014 aaKnown RBP13.59□□□□□ -0.23
SPIDR-203ENST00000517693 CEBPZQ03701 1054 aaKnown RBP13.59□□□□□ -0.23
SPIDR-203ENST00000517693 MAP3K11Q16584 847 aa13.59□□□□□ -0.23
SPIDR-203ENST00000517693 PFKFB3Q16875 520 aaPredicted RBP13.59□□□□□ -0.23
SPIDR-203ENST00000517693 CFAP100Q494V2 611 aa13.59□□□□□ -0.23
SPIDR-203ENST00000517693 GALNT17Q6IS24 598 aa13.59□□□□□ -0.23
SPIDR-203ENST00000517693 FOXP4Q8IVH2 680 aaPredicted RBP13.59□□□□□ -0.23
SPIDR-203ENST00000517693 JDP2Q8WYK2 163 aa13.59□□□□□ -0.23
SPIDR-203ENST00000517693 MRPS27Q92552 414 aaKnown RBP13.59□□□□□ -0.23
SPIDR-203ENST00000517693 V9GY48 417 aaPredicted RBP13.59□□□□□ -0.23
SPIDR-203ENST00000517693 ATRNL1Q5VV63 1379 aa13.58□□□□□ -0.23
SPIDR-203ENST00000517693 YDJCA8MPS7 323 aa13.58□□□□□ -0.24
SPIDR-203ENST00000517693 hCG_1984214I3L0E3 225 aa13.58□□□□□ -0.24
SPIDR-203ENST00000517693 TTLL1O95922 423 aa13.58□□□□□ -0.24
SPIDR-203ENST00000517693 GUCY1A2P33402 732 aa13.58□□□□□ -0.24
SPIDR-203ENST00000517693 SLC39A14Q15043 492 aa13.58□□□□□ -0.24
SPIDR-203ENST00000517693 ASPRV1Q53RT3 343 aa13.58□□□□□ -0.24
SPIDR-203ENST00000517693 SRBD1Q8N5C6 995 aaKnown RBP13.58□□□□□ -0.24
SPIDR-203ENST00000517693 ZNF713Q8N859 430 aaPredicted RBP13.58□□□□□ -0.24
SPIDR-203ENST00000517693 CEP95Q96GE4 821 aa13.58□□□□□ -0.24
SPIDR-203ENST00000517693 PGBD1Q96JS3 809 aa13.58□□□□□ -0.24
SPIDR-203ENST00000517693 PHF20Q9BVI0 1012 aa13.58□□□□□ -0.24
SPIDR-203ENST00000517693 SPZ1Q9BXG8 430 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms