RNA–Protein interactions for RNA: ENST00000517667.5

TRAPPC9-203, Transcript of trafficking protein particle complex 9, humanhuman

TSL 3

Gene TRAPPC9, Length 518 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-203ENST00000517667 PTPREP23469 700 aa14.06□□□□□ -0.16
TRAPPC9-203ENST00000517667 ATN1P54259 1190 aaPredicted RBP14.06□□□□□ -0.16
TRAPPC9-203ENST00000517667 RTP1P59025 263 aa14.06□□□□□ -0.16
TRAPPC9-203ENST00000517667 ATP2B2Q01814 1243 aa14.06□□□□□ -0.16
TRAPPC9-203ENST00000517667 WDR78Q5VTH9 848 aa14.06□□□□□ -0.16
TRAPPC9-203ENST00000517667 LBX2Q6XYB7 198 aa14.06□□□□□ -0.16
TRAPPC9-203ENST00000517667 ARRDC4Q8NCT1 418 aa14.06□□□□□ -0.16
TRAPPC9-203ENST00000517667 MAFAQ8NHW3 353 aaPredicted RBP14.06□□□□□ -0.16
TRAPPC9-203ENST00000517667 CDX2Q99626 313 aaPredicted RBP14.06□□□□□ -0.16
TRAPPC9-203ENST00000517667 FEZ1Q99689 392 aa14.06□□□□□ -0.16
TRAPPC9-203ENST00000517667 PALD1Q9ULE6 856 aa14.06□□□□□ -0.16
TRAPPC9-203ENST00000517667 CNMDO75829 334 aa14.05□□□□□ -0.16
TRAPPC9-203ENST00000517667 GRB14Q14449 540 aa14.05□□□□□ -0.16
TRAPPC9-203ENST00000517667 POTEEQ6S8J3 1075 aa14.05□□□□□ -0.16
TRAPPC9-203ENST00000517667 CERS3Q8IU89 383 aa14.05□□□□□ -0.16
TRAPPC9-203ENST00000517667 SYMPKQ92797 1274 aaKnown RBP14.05□□□□□ -0.16
TRAPPC9-203ENST00000517667 FLRT1Q9NZU1 646 aa14.05□□□□□ -0.16
TRAPPC9-203ENST00000517667 ATP11BQ9Y2G3 1177 aa14.05□□□□□ -0.16
TRAPPC9-203ENST00000517667 MYO5AQ9Y4I1 1855 aaKnown RBP14.05□□□□□ -0.16
TRAPPC9-203ENST00000517667 PRUNE2Q8WUY3 3088 aa14.04□□□□□ -0.16
TRAPPC9-203ENST00000517667 KBTBD13C9JR72 458 aa14.04□□□□□ -0.16
TRAPPC9-203ENST00000517667 GH2P01242 217 aa14.04□□□□□ -0.16
TRAPPC9-203ENST00000517667 SMAD3P84022 425 aaKnown RBP14.04□□□□□ -0.16
TRAPPC9-203ENST00000517667 G3BP1Q13283 466 aaKnown RBP eCLIP14.04□□□□□ -0.16
TRAPPC9-203ENST00000517667 SHROOM1Q2M3G4 852 aaPredicted RBP14.04□□□□□ -0.16
TRAPPC9-203ENST00000517667 CATSPERGQ6ZRH7 1159 aa14.04□□□□□ -0.16
TRAPPC9-203ENST00000517667 SEMA6BQ9H3T3 888 aa14.04□□□□□ -0.16
TRAPPC9-203ENST00000517667 PRDM6Q9NQX0 595 aa14.04□□□□□ -0.16
TRAPPC9-203ENST00000517667 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP14.04□□□□□ -0.16
TRAPPC9-203ENST00000517667 CYBAP13498 195 aa14.03□□□□□ -0.16
TRAPPC9-203ENST00000517667 VCAM1P19320 739 aa14.03□□□□□ -0.16
TRAPPC9-203ENST00000517667 CYP2C19P33261 490 aa14.03□□□□□ -0.16
TRAPPC9-203ENST00000517667 SHHQ15465 462 aa14.03□□□□□ -0.16
TRAPPC9-203ENST00000517667 ZYXQ15942 572 aaKnown RBP14.03□□□□□ -0.16
TRAPPC9-203ENST00000517667 CCDC158Q5M9N0 1113 aa14.03□□□□□ -0.16
TRAPPC9-203ENST00000517667 TTC39AQ5SRH9 613 aa14.03□□□□□ -0.16
TRAPPC9-203ENST00000517667 TATDN1Q6P1N9 297 aa14.03□□□□□ -0.16
TRAPPC9-203ENST00000517667 ADGRA1Q86SQ6 560 aa14.03□□□□□ -0.16
TRAPPC9-203ENST00000517667 ARHGAP45Q92619 1136 aa14.03□□□□□ -0.16
TRAPPC9-203ENST00000517667 KIAA1683Q9H0B3 1180 aa14.03□□□□□ -0.16
TRAPPC9-203ENST00000517667 PRDM5Q9NQX1 630 aaPredicted RBP14.03□□□□□ -0.16
TRAPPC9-203ENST00000517667 NDUFB9Q9Y6M9 179 aa14.03□□□□□ -0.16
TRAPPC9-203ENST00000517667 A0A0G2JMZ2 1700 aa14.03□□□□□ -0.16
TRAPPC9-203ENST00000517667 TMEM265A0A087WTH1 108 aa14.02□□□□□ -0.17
TRAPPC9-203ENST00000517667 STRNO43815 780 aa14.02□□□□□ -0.17
TRAPPC9-203ENST00000517667 FOSL2P15408 326 aa14.02□□□□□ -0.17
TRAPPC9-203ENST00000517667 SNX17Q15036 470 aa14.02□□□□□ -0.17
TRAPPC9-203ENST00000517667 OLFML2BQ68BL8 750 aa14.02□□□□□ -0.17
TRAPPC9-203ENST00000517667 SLC39A5Q6ZMH5 540 aa14.02□□□□□ -0.17
TRAPPC9-203ENST00000517667 DPP9Q86TI2 863 aa14.02□□□□□ -0.17
TRAPPC9-203ENST00000517667 EHD4Q9H223 541 aa14.02□□□□□ -0.17
TRAPPC9-203ENST00000517667 SAP30BPQ9UHR5 308 aaKnown RBP14.02□□□□□ -0.17
TRAPPC9-203ENST00000517667 SERPINB13Q9UIV8 391 aa14.02□□□□□ -0.17
TRAPPC9-203ENST00000517667 TTC28Q96AY4 2481 aa14.02□□□□□ -0.17
TRAPPC9-203ENST00000517667 MUC3AQ02505 3323 aa14.02□□□□□ -0.17
TRAPPC9-203ENST00000517667 SEPT4O43236 478 aa14.01□□□□□ -0.17
TRAPPC9-203ENST00000517667 IGHA2P01877 340 aa14.01□□□□□ -0.17
TRAPPC9-203ENST00000517667 RAB3GAP1Q15042 981 aa14.01□□□□□ -0.17
TRAPPC9-203ENST00000517667 C9orf50Q5SZB4 431 aa14.01□□□□□ -0.17
TRAPPC9-203ENST00000517667 GJC2Q5T442 439 aaPredicted RBP14.01□□□□□ -0.17
TRAPPC9-203ENST00000517667 C1orf53Q5VUE5 145 aa14.01□□□□□ -0.17
TRAPPC9-203ENST00000517667 TRPV1Q8NER1 839 aa14.01□□□□□ -0.17
TRAPPC9-203ENST00000517667 NPLOC4Q8TAT6 608 aa14.01□□□□□ -0.17
TRAPPC9-203ENST00000517667 MYLIPQ8WY64 445 aa14.01□□□□□ -0.17
TRAPPC9-203ENST00000517667 ZNF512BQ96KM6 892 aaPredicted RBP14.01□□□□□ -0.17
TRAPPC9-203ENST00000517667 GPR108Q9NPR9 543 aa14.01□□□□□ -0.17
TRAPPC9-203ENST00000517667 SNRKQ9NRH2 765 aa14.01□□□□□ -0.17
TRAPPC9-203ENST00000517667 SLC5A4Q9NY91 659 aa14.01□□□□□ -0.17
TRAPPC9-203ENST00000517667 BTBD7Q9P203 1132 aa14.01□□□□□ -0.17
TRAPPC9-203ENST00000517667 SPDYE16A6NNV3 312 aaPredicted RBP14□□□□□ -0.17
TRAPPC9-203ENST00000517667 GNAI2P04899 355 aa14□□□□□ -0.17
TRAPPC9-203ENST00000517667 CYP2E1P05181 493 aaPredicted RBP14□□□□□ -0.17
TRAPPC9-203ENST00000517667 ABCB5Q2M3G0 1257 aa14□□□□□ -0.17
TRAPPC9-203ENST00000517667 TRIM60Q495X7 471 aa14□□□□□ -0.17
TRAPPC9-203ENST00000517667 CERKLQ49MI3 558 aaPredicted RBP14□□□□□ -0.17
TRAPPC9-203ENST00000517667 TRMT2AQ8IZ69 625 aaKnown RBP14□□□□□ -0.17
TRAPPC9-203ENST00000517667 BADQ92934 168 aa14□□□□□ -0.17
TRAPPC9-203ENST00000517667 TTYH1Q9H313 450 aaPredicted RBP14□□□□□ -0.17
TRAPPC9-203ENST00000517667 CABP5Q9NP86 173 aa14□□□□□ -0.17
TRAPPC9-203ENST00000517667 PDLIM7Q9NR12 457 aa14□□□□□ -0.17
TRAPPC9-203ENST00000517667 NAV1Q8NEY1 1877 aa13.99□□□□□ -0.17
TRAPPC9-203ENST00000517667 ADORA2AP29274 412 aa13.99□□□□□ -0.17
TRAPPC9-203ENST00000517667 USP5P45974 858 aa13.99□□□□□ -0.17
TRAPPC9-203ENST00000517667 TNNI3KQ59H18 835 aa13.99□□□□□ -0.17
TRAPPC9-203ENST00000517667 TMED8Q6PL24 325 aaPredicted RBP13.99□□□□□ -0.17
TRAPPC9-203ENST00000517667 TTC6Q86TZ1 520 aa13.99□□□□□ -0.17
TRAPPC9-203ENST00000517667 SHCBP1Q8NEM2 672 aa13.99□□□□□ -0.17
TRAPPC9-203ENST00000517667 CDCA7LQ96GN5 454 aa13.99□□□□□ -0.17
TRAPPC9-203ENST00000517667 RPAP3Q9H6T3 665 aaPredicted RBP13.99□□□□□ -0.17
TRAPPC9-203ENST00000517667 HOXC10Q9NYD6 342 aa13.99□□□□□ -0.17
TRAPPC9-203ENST00000517667 FPGT-TNNI3KV9GXZ4 949 aa13.99□□□□□ -0.17
TRAPPC9-203ENST00000517667 CYP7A1P22680 504 aa13.98□□□□□ -0.17
TRAPPC9-203ENST00000517667 DYNLL1P63167 89 aaKnown RBP13.98□□□□□ -0.17
TRAPPC9-203ENST00000517667 MB21D1Q8N884 522 aa13.98□□□□□ -0.17
TRAPPC9-203ENST00000517667 TACC3Q9Y6A5 838 aa13.98□□□□□ -0.17
TRAPPC9-203ENST00000517667 PNMA6EA0A0J9YXQ4 647 aa13.97□□□□□ -0.17
TRAPPC9-203ENST00000517667 MYCNP04198 464 aaPredicted RBP13.97□□□□□ -0.17
TRAPPC9-203ENST00000517667 ADCYAP1R1P41586 468 aa13.97□□□□□ -0.17
TRAPPC9-203ENST00000517667 COG2Q14746 738 aa13.97□□□□□ -0.17
TRAPPC9-203ENST00000517667 ABRAQ8N0Z2 381 aa13.97□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms