RNA–Protein interactions for RNA: ENST00000517554.1

MTCL1-204, Transcript of microtubule crosslinking factor 1, humanhuman

TSL 1 (best)

Gene MTCL1, Length 1,554 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTCL1-204ENST00000517554 CCDC136Q96JN2 1154 aa25.22■■□□□ 1.63
MTCL1-204ENST00000517554 SLC45A1Q9Y2W3 748 aa25.22■■□□□ 1.63
MTCL1-204ENST00000517554 TACC3Q9Y6A5 838 aa25.22■■□□□ 1.63
MTCL1-204ENST00000517554 C19orf81C9J6K1 198 aa25.21■■□□□ 1.63
MTCL1-204ENST00000517554 PPARAQ07869 468 aa25.21■■□□□ 1.63
MTCL1-204ENST00000517554 ALX1Q15699 326 aa25.21■■□□□ 1.63
MTCL1-204ENST00000517554 TMEM179Q6ZVK1 233 aa25.21■■□□□ 1.63
MTCL1-204ENST00000517554 CCDC17Q96LX7 622 aa25.21■■□□□ 1.63
MTCL1-204ENST00000517554 DIAPH3Q9NSV4 1193 aa25.21■■□□□ 1.63
MTCL1-204ENST00000517554 PRDM1O75626 825 aa25.2■■□□□ 1.62
MTCL1-204ENST00000517554 FGAP02671 866 aa25.2■■□□□ 1.62
MTCL1-204ENST00000517554 SP3Q02447 781 aa25.2■■□□□ 1.62
MTCL1-204ENST00000517554 CPA4Q9UI42 421 aa25.2■■□□□ 1.62
MTCL1-204ENST00000517554 ZYXQ15942 572 aaKnown RBP25.19■■□□□ 1.62
MTCL1-204ENST00000517554 CD99L2Q8TCZ2 262 aa25.19■■□□□ 1.62
MTCL1-204ENST00000517554 KIAA1683Q9H0B3 1180 aa25.19■■□□□ 1.62
MTCL1-204ENST00000517554 INCENPQ9NQS7 918 aa25.19■■□□□ 1.62
MTCL1-204ENST00000517554 HIP1O00291 1037 aa25.18■■□□□ 1.62
MTCL1-204ENST00000517554 C12orf42Q96LP6 360 aa25.18■■□□□ 1.62
MTCL1-204ENST00000517554 PARK7Q99497 189 aaKnown RBP25.18■■□□□ 1.62
MTCL1-204ENST00000517554 MCOLN1Q9GZU1 580 aa25.18■■□□□ 1.62
MTCL1-204ENST00000517554 MYH8P13535 1937 aa25.18■■□□□ 1.62
MTCL1-204ENST00000517554 CTDSPL2Q05D32 466 aa25.18■■□□□ 1.62
MTCL1-204ENST00000517554 USP17L2Q6R6M4 530 aa25.18■■□□□ 1.62
MTCL1-204ENST00000517554 CTU1Q7Z7A3 348 aaKnown RBP25.18■■□□□ 1.62
MTCL1-204ENST00000517554 MKNK2Q9HBH9 465 aa25.18■■□□□ 1.62
MTCL1-204ENST00000517554 BCRP11274 1271 aa25.17■■□□□ 1.62
MTCL1-204ENST00000517554 CHMLP26374 656 aa25.17■■□□□ 1.62
MTCL1-204ENST00000517554 KIAA1755Q5JYT7 1200 aa25.17■■□□□ 1.62
MTCL1-204ENST00000517554 ASCC2Q9H1I8 757 aaPredicted RBP25.17■■□□□ 1.62
MTCL1-204ENST00000517554 TMOD4Q9NZQ9 345 aa25.17■■□□□ 1.62
MTCL1-204ENST00000517554 ANAPC4Q9UJX5 808 aa25.17■■□□□ 1.62
MTCL1-204ENST00000517554 GREB1LQ9C091 1923 aaPredicted RBP25.16■■□□□ 1.62
MTCL1-204ENST00000517554 HOXA7P31268 230 aaPredicted RBP25.16■■□□□ 1.62
MTCL1-204ENST00000517554 FEZ1Q99689 392 aa25.16■■□□□ 1.62
MTCL1-204ENST00000517554 ARHGAP39Q9C0H5 1083 aa25.16■■□□□ 1.62
MTCL1-204ENST00000517554 DDX52Q9Y2R4 599 aaKnown RBP eCLIP25.16■■□□□ 1.62
MTCL1-204ENST00000517554 ZMYM6O95789 1325 aa25.15■■□□□ 1.62
MTCL1-204ENST00000517554 CTGFP29279 349 aa25.15■■□□□ 1.62
MTCL1-204ENST00000517554 ICA1Q05084 483 aa25.15■■□□□ 1.62
MTCL1-204ENST00000517554 IGKV6D-41A0A0C4DH26 115 aa25.14■■□□□ 1.62
MTCL1-204ENST00000517554 NBPF3Q9H094 633 aa25.14■■□□□ 1.62
MTCL1-204ENST00000517554 ZSWIM8A7E2V4 1837 aa25.14■■□□□ 1.61
MTCL1-204ENST00000517554 EEF2P13639 858 aaKnown RBP25.14■■□□□ 1.61
MTCL1-204ENST00000517554 MFAP1P55081 439 aaKnown RBP25.14■■□□□ 1.61
MTCL1-204ENST00000517554 POTEEQ6S8J3 1075 aa25.14■■□□□ 1.61
MTCL1-204ENST00000517554 OTOP1Q7RTM1 612 aa25.14■■□□□ 1.61
MTCL1-204ENST00000517554 ERO1AQ96HE7 468 aa25.14■■□□□ 1.61
MTCL1-204ENST00000517554 P2RX7Q99572 595 aaKnown RBP25.14■■□□□ 1.61
MTCL1-204ENST00000517554 TMX2Q9Y320 296 aa25.14■■□□□ 1.61
MTCL1-204ENST00000517554 FGRP09769 529 aa25.13■■□□□ 1.61
MTCL1-204ENST00000517554 VCAM1P19320 739 aa25.13■■□□□ 1.61
MTCL1-204ENST00000517554 USP14P54578 494 aa25.13■■□□□ 1.61
MTCL1-204ENST00000517554 LACTBP83111 547 aaPredicted RBP25.13■■□□□ 1.61
MTCL1-204ENST00000517554 KANSL2Q9H9L4 492 aa25.13■■□□□ 1.61
MTCL1-204ENST00000517554 PDE4BQ07343 736 aa25.12■■□□□ 1.61
MTCL1-204ENST00000517554 PABPC4Q13310 644 aaKnown RBP eCLIP25.12■■□□□ 1.61
MTCL1-204ENST00000517554 FAM47AQ5JRC9 791 aa25.12■■□□□ 1.61
MTCL1-204ENST00000517554 ZNF444Q8N0Y2 327 aaPredicted RBP25.12■■□□□ 1.61
MTCL1-204ENST00000517554 NKX2-3Q8TAU0 364 aa25.12■■□□□ 1.61
MTCL1-204ENST00000517554 SMCR8Q8TEV9 937 aaPredicted RBP25.12■■□□□ 1.61
MTCL1-204ENST00000517554 PNMA3Q9UL41 463 aa25.12■■□□□ 1.61
MTCL1-204ENST00000517554 PEX10O60683 326 aa25.11■■□□□ 1.61
MTCL1-204ENST00000517554 ECM2O94769 699 aaPredicted RBP25.11■■□□□ 1.61
MTCL1-204ENST00000517554 HAND2P61296 217 aa25.11■■□□□ 1.61
MTCL1-204ENST00000517554 ZNF287Q9HBT7 754 aa25.11■■□□□ 1.61
MTCL1-204ENST00000517554 TRIM17Q9Y577 477 aa25.11■■□□□ 1.61
MTCL1-204ENST00000517554 SLC3A2P08195 630 aaKnown RBP25.1■■□□□ 1.61
MTCL1-204ENST00000517554 OSBPP22059 807 aa25.1■■□□□ 1.61
MTCL1-204ENST00000517554 DSCC1Q9BVC3 393 aa25.1■■□□□ 1.61
MTCL1-204ENST00000517554 ARHGEF10LQ9HCE6 1279 aa25.1■■□□□ 1.61
MTCL1-204ENST00000517554 TFAP4Q01664 338 aa25.1■■□□□ 1.61
MTCL1-204ENST00000517554 CATSPERGQ6ZRH7 1159 aa25.1■■□□□ 1.61
MTCL1-204ENST00000517554 ANKRD13CQ8N6S4 541 aa25.1■■□□□ 1.61
MTCL1-204ENST00000517554 NEDD1Q8NHV4 660 aa25.1■■□□□ 1.61
MTCL1-204ENST00000517554 CEP95Q96GE4 821 aa25.1■■□□□ 1.61
MTCL1-204ENST00000517554 ABHD8Q96I13 439 aa25.1■■□□□ 1.61
MTCL1-204ENST00000517554 VCPKMTQ9H867 229 aa25.1■■□□□ 1.61
MTCL1-204ENST00000517554 PLIN4Q96Q06 1357 aa25.09■■□□□ 1.61
MTCL1-204ENST00000517554 HTTP42858 3142 aa25.09■■□□□ 1.61
MTCL1-204ENST00000517554 HERVK_113P62684 666 aa25.09■■□□□ 1.61
MTCL1-204ENST00000517554 IRX3P78415 501 aaPredicted RBP25.09■■□□□ 1.61
MTCL1-204ENST00000517554 ATP2B2Q01814 1243 aa25.09■■□□□ 1.61
MTCL1-204ENST00000517554 ERICH6BQ5W0A0 696 aa25.09■■□□□ 1.61
MTCL1-204ENST00000517554 TBC1D10CQ8IV04 446 aa25.09■■□□□ 1.61
MTCL1-204ENST00000517554 TRIM47Q96LD4 638 aa25.09■■□□□ 1.61
MTCL1-204ENST00000517554 RPAP3Q9H6T3 665 aaPredicted RBP25.09■■□□□ 1.61
MTCL1-204ENST00000517554 EFCC1Q9HA90 598 aa25.09■■□□□ 1.61
MTCL1-204ENST00000517554 NYAP2Q9P242 653 aa25.09■■□□□ 1.61
MTCL1-204ENST00000517554 RAD50Q92878 1312 aa25.08■■□□□ 1.61
MTCL1-204ENST00000517554 USP17L15C9J2P7 530 aa25.08■■□□□ 1.61
MTCL1-204ENST00000517554 USP17L13C9JLJ4 530 aa25.08■■□□□ 1.61
MTCL1-204ENST00000517554 USP17L11C9JVI0 530 aa25.08■■□□□ 1.61
MTCL1-204ENST00000517554 USP17L18D6R9N7 530 aa25.08■■□□□ 1.61
MTCL1-204ENST00000517554 USP17L22D6RA61 530 aa25.08■■□□□ 1.61
MTCL1-204ENST00000517554 USP17L17D6RBQ6 530 aa25.08■■□□□ 1.61
MTCL1-204ENST00000517554 USP17L19D6RCP7 530 aa25.08■■□□□ 1.61
MTCL1-204ENST00000517554 USP17L20D6RJB6 530 aa25.08■■□□□ 1.61
MTCL1-204ENST00000517554 SGSM2O43147 1006 aa25.08■■□□□ 1.61
MTCL1-204ENST00000517554 USP17L24Q0WX57 530 aa25.08■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms