RNA–Protein interactions for RNA: ENST00000517276.1

SCARNA11.3-201, small Cajal body-specific RNA 11, humanhuman

BASIC

Gene SCARNA11, Length 130 nt, Biotype scaRNA, Subcellular localisation Cytoplasm, Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA11.3-201ENST00000517276 SLC52A2Q9HAB3 445 aa3.42□□□□□ -1.86
SCARNA11.3-201ENST00000517276 CRTAC1Q9NQ79 661 aa3.42□□□□□ -1.86
SCARNA11.3-201ENST00000517276 EIF4ENIF1Q9NRA8 985 aaKnown RBP3.42□□□□□ -1.86
SCARNA11.3-201ENST00000517276 INTS7Q9NVH2 962 aaKnown RBP3.42□□□□□ -1.86
SCARNA11.3-201ENST00000517276 KLHL3Q9UH77 587 aa3.42□□□□□ -1.86
SCARNA11.3-201ENST00000517276 PUF60Q9UHX1 559 aaKnown RBP3.42□□□□□ -1.86
SCARNA11.3-201ENST00000517276 HCN2Q9UL51 889 aa3.42□□□□□ -1.86
SCARNA11.3-201ENST00000517276 LUC7L2Q9Y383 392 aaKnown RBP3.42□□□□□ -1.86
SCARNA11.3-201ENST00000517276 SLC12A7Q9Y666 1083 aa3.42□□□□□ -1.86
SCARNA11.3-201ENST00000517276 RASSF10A6NK89 507 aa3.41□□□□□ -1.86
SCARNA11.3-201ENST00000517276 ZBTB42B2RXF5 422 aa3.41□□□□□ -1.86
SCARNA11.3-201ENST00000517276 CHURC1-FNTBB4DL54 471 aa3.41□□□□□ -1.86
SCARNA11.3-201ENST00000517276 AGRPO00253 132 aa3.41□□□□□ -1.86
SCARNA11.3-201ENST00000517276 GFRA2O00451 464 aa3.41□□□□□ -1.86
SCARNA11.3-201ENST00000517276 TNFRSF10CO14798 259 aa3.41□□□□□ -1.86
SCARNA11.3-201ENST00000517276 TCEA3O75764 348 aa3.41□□□□□ -1.86
SCARNA11.3-201ENST00000517276 PRKD3O94806 890 aa3.41□□□□□ -1.86
SCARNA11.3-201ENST00000517276 FBXO21O94952 628 aa3.41□□□□□ -1.86
SCARNA11.3-201ENST00000517276 APBA3O96018 575 aa3.41□□□□□ -1.86
SCARNA11.3-201ENST00000517276 B3GALT4O96024 378 aa3.41□□□□□ -1.86
SCARNA11.3-201ENST00000517276 TP53P04637 393 aaPredicted RBP3.41□□□□□ -1.86
SCARNA11.3-201ENST00000517276 ITGAVP06756 1048 aa3.41□□□□□ -1.86
SCARNA11.3-201ENST00000517276 MYL3P08590 195 aa3.41□□□□□ -1.86
SCARNA11.3-201ENST00000517276 C6orf222P0C671 652 aaPredicted RBP3.41□□□□□ -1.86
SCARNA11.3-201ENST00000517276 MYBL2P10244 700 aa3.41□□□□□ -1.86
SCARNA11.3-201ENST00000517276 PF4V1P10720 104 aa3.41□□□□□ -1.86
SCARNA11.3-201ENST00000517276 RAG1P15918 1043 aa3.41□□□□□ -1.86
SCARNA11.3-201ENST00000517276 PLCG1P19174 1290 aa3.41□□□□□ -1.86
SCARNA11.3-201ENST00000517276 SOX18P35713 384 aa3.41□□□□□ -1.86
SCARNA11.3-201ENST00000517276 IARSP41252 1262 aaKnown RBP3.41□□□□□ -1.86
SCARNA11.3-201ENST00000517276 DGKGP49619 791 aa3.41□□□□□ -1.86
SCARNA11.3-201ENST00000517276 KCNQ4P56696 695 aa3.41□□□□□ -1.86
SCARNA11.3-201ENST00000517276 SUMO1P63165 101 aaKnown RBP3.41□□□□□ -1.86
SCARNA11.3-201ENST00000517276 PURAQ00577 322 aaKnown RBP3.41□□□□□ -1.86
SCARNA11.3-201ENST00000517276 PLAURQ03405 335 aa3.41□□□□□ -1.86
SCARNA11.3-201ENST00000517276 KCNC4Q03721 635 aa3.41□□□□□ -1.86
SCARNA11.3-201ENST00000517276 GRB10Q13322 594 aa3.41□□□□□ -1.86
SCARNA11.3-201ENST00000517276 MAP7Q14244 749 aa3.41□□□□□ -1.86
SCARNA11.3-201ENST00000517276 GALEQ14376 348 aa3.41□□□□□ -1.86
SCARNA11.3-201ENST00000517276 HSP90AA2PQ14568 343 aaPredicted RBP3.41□□□□□ -1.86
SCARNA11.3-201ENST00000517276 DHCR24Q15392 516 aa3.41□□□□□ -1.86
SCARNA11.3-201ENST00000517276 DIEXFQ68CQ4 756 aaKnown RBP3.41□□□□□ -1.86
SCARNA11.3-201ENST00000517276 CDCA2Q69YH5 1023 aaPredicted RBP3.41□□□□□ -1.86
SCARNA11.3-201ENST00000517276 LRFN4Q6PJG9 635 aa3.41□□□□□ -1.86
SCARNA11.3-201ENST00000517276 DHX32Q7L7V1 743 aaKnown RBP3.41□□□□□ -1.86
SCARNA11.3-201ENST00000517276 LYSMD3Q7Z3D4 306 aa3.41□□□□□ -1.86
SCARNA11.3-201ENST00000517276 PDZD3Q86UT5 571 aa3.41□□□□□ -1.86
SCARNA11.3-201ENST00000517276 SCUBE1Q8IWY4 988 aa3.41□□□□□ -1.86
SCARNA11.3-201ENST00000517276 AMOTL1Q8IY63 956 aa3.41□□□□□ -1.86
SCARNA11.3-201ENST00000517276 AHI1Q8N157 1196 aa3.41□□□□□ -1.86
SCARNA11.3-201ENST00000517276 ANKRD42Q8N9B4 389 aa3.41□□□□□ -1.86
SCARNA11.3-201ENST00000517276 PI4K2BQ8TCG2 481 aa3.41□□□□□ -1.86
SCARNA11.3-201ENST00000517276 GPBAR1Q8TDU6 330 aa3.41□□□□□ -1.86
SCARNA11.3-201ENST00000517276 USP7Q93009 1102 aa3.41□□□□□ -1.86
SCARNA11.3-201ENST00000517276 BHMTQ93088 406 aa3.41□□□□□ -1.86
SCARNA11.3-201ENST00000517276 OSBP2Q969R2 916 aa3.41□□□□□ -1.86
SCARNA11.3-201ENST00000517276 PLPPR2Q96GM1 343 aa3.41□□□□□ -1.86
SCARNA11.3-201ENST00000517276 SCLYQ96I15 445 aa3.41□□□□□ -1.86
SCARNA11.3-201ENST00000517276 FGD4Q96M96 766 aa3.41□□□□□ -1.86
SCARNA11.3-201ENST00000517276 CAMKK2Q96RR4 588 aa3.41□□□□□ -1.86
SCARNA11.3-201ENST00000517276 STRBPQ96SI9 672 aaKnown RBP3.41□□□□□ -1.86
SCARNA11.3-201ENST00000517276 TTC1Q99614 292 aa3.41□□□□□ -1.86
SCARNA11.3-201ENST00000517276 SLC30A3Q99726 388 aa3.41□□□□□ -1.86
SCARNA11.3-201ENST00000517276 SARGQ9BW04 601 aa3.41□□□□□ -1.86
SCARNA11.3-201ENST00000517276 PCGF6Q9BYE7 350 aa3.41□□□□□ -1.86
SCARNA11.3-201ENST00000517276 PBX4Q9BYU1 374 aa3.41□□□□□ -1.86
SCARNA11.3-201ENST00000517276 CRISPLD1Q9H336 500 aa3.41□□□□□ -1.86
SCARNA11.3-201ENST00000517276 CNNM2Q9H8M5 875 aa3.41□□□□□ -1.86
SCARNA11.3-201ENST00000517276 VTA1Q9NP79 307 aa3.41□□□□□ -1.86
SCARNA11.3-201ENST00000517276 C11orf16Q9NQ32 467 aa3.41□□□□□ -1.86
SCARNA11.3-201ENST00000517276 ANLNQ9NQW6 1124 aa3.41□□□□□ -1.86
SCARNA11.3-201ENST00000517276 GMIPQ9P107 970 aa3.41□□□□□ -1.86
SCARNA11.3-201ENST00000517276 LRP2BPQ9P2M1 347 aa3.41□□□□□ -1.86
SCARNA11.3-201ENST00000517276 APEX2Q9UBZ4 518 aa3.41□□□□□ -1.86
SCARNA11.3-201ENST00000517276 SUSD2Q9UGT4 822 aa3.41□□□□□ -1.86
SCARNA11.3-201ENST00000517276 DACH1Q9UI36 760 aa3.41□□□□□ -1.86
SCARNA11.3-201ENST00000517276 PCDHA4Q9UN74 947 aa3.41□□□□□ -1.86
SCARNA11.3-201ENST00000517276 LZTS1Q9Y250 596 aa3.41□□□□□ -1.86
SCARNA11.3-201ENST00000517276 LOC102724428A0A0B4J2F2 783 aa3.4□□□□□ -1.87
SCARNA11.3-201ENST00000517276 FIGNL2A6NMB9 653 aa3.4□□□□□ -1.87
SCARNA11.3-201ENST00000517276 ZNF891A8MT65 544 aaPredicted RBP3.4□□□□□ -1.87
SCARNA11.3-201ENST00000517276 PIP5K1CO60331 668 aa3.4□□□□□ -1.87
SCARNA11.3-201ENST00000517276 BRINP1O60477 761 aa3.4□□□□□ -1.87
SCARNA11.3-201ENST00000517276 NBNO60934 754 aa3.4□□□□□ -1.87
SCARNA11.3-201ENST00000517276 ECEL1O95672 775 aa3.4□□□□□ -1.87
SCARNA11.3-201ENST00000517276 EPHX1P07099 455 aa3.4□□□□□ -1.87
SCARNA11.3-201ENST00000517276 THBS1P07996 1170 aa3.4□□□□□ -1.87
SCARNA11.3-201ENST00000517276 PYGMP11217 842 aa3.4□□□□□ -1.87
SCARNA11.3-201ENST00000517276 PABPC1P11940 636 aaKnown RBP3.4□□□□□ -1.87
SCARNA11.3-201ENST00000517276 BPIP17213 487 aa3.4□□□□□ -1.87
SCARNA11.3-201ENST00000517276 HALP42357 657 aa3.4□□□□□ -1.87
SCARNA11.3-201ENST00000517276 SIK1P57059 783 aa3.4□□□□□ -1.87
SCARNA11.3-201ENST00000517276 PICALMQ13492 652 aa3.4□□□□□ -1.87
SCARNA11.3-201ENST00000517276 PCBP2Q15366 365 aaKnown RBP eCLIP3.4□□□□□ -1.87
SCARNA11.3-201ENST00000517276 TRIM61Q5EBN2 209 aa3.4□□□□□ -1.87
SCARNA11.3-201ENST00000517276 C6orf118Q5T5N4 469 aa3.4□□□□□ -1.87
SCARNA11.3-201ENST00000517276 SAMD5Q5TGI4 173 aa3.4□□□□□ -1.87
SCARNA11.3-201ENST00000517276 CEP135Q66GS9 1140 aa3.4□□□□□ -1.87
SCARNA11.3-201ENST00000517276 CXorf57Q6NSI4 855 aaKnown RBP3.4□□□□□ -1.87
SCARNA11.3-201ENST00000517276 NSMFQ6X4W1 530 aa3.4□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms