RNA–Protein interactions for RNA: ENST00000517211.2

RN7SKP40-201, Transcript of RNA, 7SK small nuclear pseudogene 40, humanhuman

BASIC

Gene RN7SKP40, Length 242 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SKP40-201ENST00000517211 ING1Q9UK53 422 aaPredicted RBP4.5□□□□□ -1.69
RN7SKP40-201ENST00000517211 NOTOA8MTQ0 251 aa4.49□□□□□ -1.69
RN7SKP40-201ENST00000517211 LILRA2Q8N149 483 aa4.49□□□□□ -1.69
RN7SKP40-201ENST00000517211 CLUAP1Q96AJ1 413 aa4.49□□□□□ -1.69
RN7SKP40-201ENST00000517211 TNFRSF18Q9Y5U5 241 aa4.49□□□□□ -1.69
RN7SKP40-201ENST00000517211 ZNF20P17024 532 aa4.48□□□□□ -1.69
RN7SKP40-201ENST00000517211 KCNC1P48547 511 aa4.48□□□□□ -1.69
RN7SKP40-201ENST00000517211 NCKAP1LP55160 1127 aa4.48□□□□□ -1.69
RN7SKP40-201ENST00000517211 NKG7Q16617 165 aa4.48□□□□□ -1.69
RN7SKP40-201ENST00000517211 ZBTB37Q5TC79 503 aa4.48□□□□□ -1.69
RN7SKP40-201ENST00000517211 IGDCC3Q8IVU1 814 aa4.48□□□□□ -1.69
RN7SKP40-201ENST00000517211 HELQQ8TDG4 1101 aa4.48□□□□□ -1.69
RN7SKP40-201ENST00000517211 DDX1Q92499 740 aaKnown RBP4.48□□□□□ -1.69
RN7SKP40-201ENST00000517211 C8orf49Q96NF6 230 aa4.48□□□□□ -1.69
RN7SKP40-201ENST00000517211 DUSP15Q9H1R2 295 aaPredicted RBP4.48□□□□□ -1.69
RN7SKP40-201ENST00000517211 CCDC87Q9NVE4 849 aa4.48□□□□□ -1.69
RN7SKP40-201ENST00000517211 OR14I1A6ND48 311 aa4.47□□□□□ -1.69
RN7SKP40-201ENST00000517211 C1QTNF3-AMACRE9PGA6 284 aa4.47□□□□□ -1.69
RN7SKP40-201ENST00000517211 FZD6O60353 706 aa4.47□□□□□ -1.69
RN7SKP40-201ENST00000517211 LRIG2O94898 1065 aa4.47□□□□□ -1.69
RN7SKP40-201ENST00000517211 FBLN1P23142 703 aa4.47□□□□□ -1.69
RN7SKP40-201ENST00000517211 TPP2P29144 1249 aaPredicted RBP4.47□□□□□ -1.69
RN7SKP40-201ENST00000517211 EGR3Q06889 387 aa4.47□□□□□ -1.69
RN7SKP40-201ENST00000517211 KLF10Q13118 480 aa4.47□□□□□ -1.69
RN7SKP40-201ENST00000517211 AAMPQ13685 434 aa4.47□□□□□ -1.69
RN7SKP40-201ENST00000517211 SLBPQ14493 270 aaKnown RBP eCLIP4.47□□□□□ -1.69
RN7SKP40-201ENST00000517211 GAB4Q2WGN9 574 aa4.47□□□□□ -1.69
RN7SKP40-201ENST00000517211 CPZQ66K79 652 aa4.47□□□□□ -1.69
RN7SKP40-201ENST00000517211 TMPRSS7Q7RTY8 843 aa4.47□□□□□ -1.69
RN7SKP40-201ENST00000517211 GRIN3AQ8TCU5 1115 aa4.47□□□□□ -1.69
RN7SKP40-201ENST00000517211 XAGE3Q8WTP9 111 aa4.47□□□□□ -1.69
RN7SKP40-201ENST00000517211 NPHS2Q9NP85 383 aa4.47□□□□□ -1.69
RN7SKP40-201ENST00000517211 PICK1Q9NRD5 415 aa4.47□□□□□ -1.69
RN7SKP40-201ENST00000517211 TACC3Q9Y6A5 838 aa4.47□□□□□ -1.69
RN7SKP40-201ENST00000517211 FITM1A5D6W6 292 aa4.46□□□□□ -1.7
RN7SKP40-201ENST00000517211 NR0B2Q15466 257 aa4.46□□□□□ -1.7
RN7SKP40-201ENST00000517211 TMEM164Q5U3C3 297 aa4.46□□□□□ -1.7
RN7SKP40-201ENST00000517211 CDC37L1Q7L3B6 337 aa4.46□□□□□ -1.7
RN7SKP40-201ENST00000517211 CDH24Q86UP0 819 aa4.46□□□□□ -1.7
RN7SKP40-201ENST00000517211 SULF2Q8IWU5 870 aa4.46□□□□□ -1.7
RN7SKP40-201ENST00000517211 OXR1Q8N573 874 aa4.46□□□□□ -1.7
RN7SKP40-201ENST00000517211 MZB1Q8WU39 189 aa4.46□□□□□ -1.7
RN7SKP40-201ENST00000517211 PPP1R13LQ8WUF5 828 aa4.46□□□□□ -1.7
RN7SKP40-201ENST00000517211 RBM15Q96T37 977 aaKnown RBP eCLIP4.46□□□□□ -1.7
RN7SKP40-201ENST00000517211 PCED1AQ9H1Q7 454 aa4.46□□□□□ -1.7
RN7SKP40-201ENST00000517211 TMEM238LA0A1B0GVL6 79 aa4.45□□□□□ -1.7
RN7SKP40-201ENST00000517211 ITGB3P05106 788 aa4.45□□□□□ -1.7
RN7SKP40-201ENST00000517211 PLCB3Q01970 1234 aa4.45□□□□□ -1.7
RN7SKP40-201ENST00000517211 NT5DC1Q5TFE4 455 aa4.45□□□□□ -1.7
RN7SKP40-201ENST00000517211 ACSBG1Q96GR2 724 aa4.45□□□□□ -1.7
RN7SKP40-201ENST00000517211 NAF1Q96HR8 494 aaKnown RBP4.45□□□□□ -1.7
RN7SKP40-201ENST00000517211 Q96M66 194 aa4.45□□□□□ -1.7
RN7SKP40-201ENST00000517211 GPN3Q9UHW5 284 aaPredicted RBP4.45□□□□□ -1.7
RN7SKP40-201ENST00000517211 CNOT11Q9UKZ1 510 aaKnown RBP4.45□□□□□ -1.7
RN7SKP40-201ENST00000517211 CYR61O00622 381 aa4.44□□□□□ -1.7
RN7SKP40-201ENST00000517211 LETMD1Q6P1Q0 360 aa4.44□□□□□ -1.7
RN7SKP40-201ENST00000517211 SH3RF3Q8TEJ3 882 aaPredicted RBP4.44□□□□□ -1.7
RN7SKP40-201ENST00000517211 SPATA25Q9BR10 227 aa4.44□□□□□ -1.7
RN7SKP40-201ENST00000517211 PCDHA11Q9Y5I1 949 aa4.44□□□□□ -1.7
RN7SKP40-201ENST00000517211 ARNTP27540 789 aa4.43□□□□□ -1.7
RN7SKP40-201ENST00000517211 CNR2P34972 360 aa4.43□□□□□ -1.7
RN7SKP40-201ENST00000517211 PTPN12Q05209 780 aaKnown RBP4.43□□□□□ -1.7
RN7SKP40-201ENST00000517211 ZNF252P-AS1Q0IIN9 211 aa4.43□□□□□ -1.7
RN7SKP40-201ENST00000517211 RPS26P11Q5JNZ5 115 aaPredicted RBP4.43□□□□□ -1.7
RN7SKP40-201ENST00000517211 CRIP3Q6Q6R5 217 aa4.43□□□□□ -1.7
RN7SKP40-201ENST00000517211 GJD3Q8N144 294 aa4.43□□□□□ -1.7
RN7SKP40-201ENST00000517211 CACNA2D2Q9NY47 1150 aa4.43□□□□□ -1.7
RN7SKP40-201ENST00000517211 FANCGO15287 622 aa4.42□□□□□ -1.7
RN7SKP40-201ENST00000517211 LIMS1P48059 325 aa4.42□□□□□ -1.7
RN7SKP40-201ENST00000517211 EHHADHQ08426 723 aa4.42□□□□□ -1.7
RN7SKP40-201ENST00000517211 RASIP1Q5U651 963 aa4.42□□□□□ -1.7
RN7SKP40-201ENST00000517211 NLRX1Q86UT6 975 aa4.42□□□□□ -1.7
RN7SKP40-201ENST00000517211 LDHDQ86WU2 507 aa4.42□□□□□ -1.7
RN7SKP40-201ENST00000517211 GTF3C2Q8WUA4 911 aaPredicted RBP4.42□□□□□ -1.7
RN7SKP40-201ENST00000517211 TMEM39AQ9NV64 488 aa4.42□□□□□ -1.7
RN7SKP40-201ENST00000517211 DUSP13Q9UII6 198 aa4.42□□□□□ -1.7
RN7SKP40-201ENST00000517211 KRTAP10-9P60411 292 aa4.41□□□□□ -1.7
RN7SKP40-201ENST00000517211 ORC1Q13415 861 aa4.41□□□□□ -1.7
RN7SKP40-201ENST00000517211 INPP5AQ14642 412 aa4.41□□□□□ -1.7
RN7SKP40-201ENST00000517211 KIR3DS1Q14943 382 aa4.41□□□□□ -1.7
RN7SKP40-201ENST00000517211 CLP1Q92989 425 aaKnown RBP4.41□□□□□ -1.7
RN7SKP40-201ENST00000517211 LOXL4Q96JB6 756 aa4.41□□□□□ -1.7
RN7SKP40-201ENST00000517211 C1QTNF3Q9BXJ4 246 aa4.41□□□□□ -1.7
RN7SKP40-201ENST00000517211 CBX8Q9HC52 389 aa4.41□□□□□ -1.7
RN7SKP40-201ENST00000517211 USP40Q9NVE5 1235 aa4.41□□□□□ -1.7
RN7SKP40-201ENST00000517211 HS3ST3A1Q9Y663 406 aa4.41□□□□□ -1.7
RN7SKP40-201ENST00000517211 ATP2B4P23634 1241 aa4.4□□□□□ -1.71
RN7SKP40-201ENST00000517211 TRIM26Q12899 539 aaPredicted RBP4.4□□□□□ -1.71
RN7SKP40-201ENST00000517211 ELOAQ14241 798 aaKnown RBP4.4□□□□□ -1.71
RN7SKP40-201ENST00000517211 SNX17Q15036 470 aa4.4□□□□□ -1.71
RN7SKP40-201ENST00000517211 ZNF575Q86XF7 245 aa4.4□□□□□ -1.71
RN7SKP40-201ENST00000517211 C11orf21Q9P2W6 132 aa4.4□□□□□ -1.71
RN7SKP40-201ENST00000517211 PRAMEF27A3QJZ7 478 aa4.39□□□□□ -1.71
RN7SKP40-201ENST00000517211 SUPT5HO00267 1087 aaKnown RBP4.39□□□□□ -1.71
RN7SKP40-201ENST00000517211 BUB1BO60566 1050 aaPredicted RBP4.39□□□□□ -1.71
RN7SKP40-201ENST00000517211 YBX1P67809 324 aaKnown RBP4.39□□□□□ -1.71
RN7SKP40-201ENST00000517211 GRM2Q14416 872 aa4.39□□□□□ -1.71
RN7SKP40-201ENST00000517211 CDSNQ15517 529 aa4.39□□□□□ -1.71
RN7SKP40-201ENST00000517211 PRAMEF13Q5VWM6 474 aa4.39□□□□□ -1.71
RN7SKP40-201ENST00000517211 PRPF40BQ6NWY9 871 aaKnown RBP4.39□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms