RNA–Protein interactions for RNA: ENST00000516991.1

SCARNA20.5-201, small Cajal body-specific RNA 20, humanhuman

BASIC

Gene SCARNA20, Length 142 nt, Biotype scaRNA, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA20.5-201ENST00000516991 PRKAR2AP13861 404 aaKnown RBP17.72■□□□□ 0.43
SCARNA20.5-201ENST00000516991 RGS2P41220 211 aa17.72■□□□□ 0.43
SCARNA20.5-201ENST00000516991 CCNA1P78396 465 aa17.72■□□□□ 0.43
SCARNA20.5-201ENST00000516991 ABCB5Q2M3G0 1257 aa17.72■□□□□ 0.43
SCARNA20.5-201ENST00000516991 PLEKHH3Q7Z736 793 aa17.72■□□□□ 0.43
SCARNA20.5-201ENST00000516991 PPIL4Q8WUA2 492 aaKnown RBP eCLIP17.72■□□□□ 0.43
SCARNA20.5-201ENST00000516991 APBA2Q99767 749 aa17.72■□□□□ 0.43
SCARNA20.5-201ENST00000516991 RIOK1Q9BRS2 568 aaKnown RBP17.72■□□□□ 0.43
SCARNA20.5-201ENST00000516991 CRNKL1Q9BZJ0 848 aaKnown RBP17.72■□□□□ 0.43
SCARNA20.5-201ENST00000516991 NBPF3Q9H094 633 aa17.72■□□□□ 0.43
SCARNA20.5-201ENST00000516991 CWC22Q9HCG8 908 aaKnown RBP17.72■□□□□ 0.43
SCARNA20.5-201ENST00000516991 IL1RAPL2Q9NP60 686 aa17.72■□□□□ 0.43
SCARNA20.5-201ENST00000516991 RABGAP1Q9Y3P9 1069 aa17.72■□□□□ 0.43
SCARNA20.5-201ENST00000516991 GLRX3O76003 335 aaKnown RBP17.71■□□□□ 0.43
SCARNA20.5-201ENST00000516991 TRIM32Q13049 653 aa17.71■□□□□ 0.43
SCARNA20.5-201ENST00000516991 RAB3GAP1Q15042 981 aa17.71■□□□□ 0.43
SCARNA20.5-201ENST00000516991 ZYXQ15942 572 aaKnown RBP17.71■□□□□ 0.43
SCARNA20.5-201ENST00000516991 GPR142Q7Z601 462 aa17.71■□□□□ 0.43
SCARNA20.5-201ENST00000516991 RPAP2Q8IXW5 612 aaPredicted RBP17.71■□□□□ 0.43
SCARNA20.5-201ENST00000516991 DIS3LQ8TF46 1054 aaKnown RBP17.71■□□□□ 0.43
SCARNA20.5-201ENST00000516991 USP6NLQ92738 828 aa17.71■□□□□ 0.43
SCARNA20.5-201ENST00000516991 PORCNQ9H237 461 aa17.71■□□□□ 0.43
SCARNA20.5-201ENST00000516991 OGDHLQ9ULD0 1010 aa17.71■□□□□ 0.43
SCARNA20.5-201ENST00000516991 POLR3DP05423 398 aaPredicted RBP17.7■□□□□ 0.42
SCARNA20.5-201ENST00000516991 PDE6AP16499 860 aa17.7■□□□□ 0.42
SCARNA20.5-201ENST00000516991 SHMT1P34896 483 aa17.7■□□□□ 0.42
SCARNA20.5-201ENST00000516991 MORN1Q5T089 497 aa17.7■□□□□ 0.42
SCARNA20.5-201ENST00000516991 SLC9C2Q5TAH2 1124 aa17.7■□□□□ 0.42
SCARNA20.5-201ENST00000516991 DIEXFQ68CQ4 756 aaKnown RBP17.7■□□□□ 0.42
SCARNA20.5-201ENST00000516991 CHMP4BQ9H444 224 aaKnown RBP17.7■□□□□ 0.42
SCARNA20.5-201ENST00000516991 DDX19BQ9UMR2 479 aa17.7■□□□□ 0.42
SCARNA20.5-201ENST00000516991 RANBP2P49792 3224 aaKnown RBP17.7■□□□□ 0.42
SCARNA20.5-201ENST00000516991 PEX10O60683 326 aa17.69■□□□□ 0.42
SCARNA20.5-201ENST00000516991 IFIT2P09913 472 aaKnown RBP17.69■□□□□ 0.42
SCARNA20.5-201ENST00000516991 VCAM1P19320 739 aa17.69■□□□□ 0.42
SCARNA20.5-201ENST00000516991 LBX2Q6XYB7 198 aa17.69■□□□□ 0.42
SCARNA20.5-201ENST00000516991 CATSPERGQ6ZRH7 1159 aa17.69■□□□□ 0.42
SCARNA20.5-201ENST00000516991 C11orf49Q9H6J7 331 aa17.69■□□□□ 0.42
SCARNA20.5-201ENST00000516991 RAB11FIP3O75154 756 aa17.68■□□□□ 0.42
SCARNA20.5-201ENST00000516991 PLCD1P51178 756 aa17.68■□□□□ 0.42
SCARNA20.5-201ENST00000516991 GABPAQ06546 454 aa17.68■□□□□ 0.42
SCARNA20.5-201ENST00000516991 MAP2K5Q13163 448 aa17.68■□□□□ 0.42
SCARNA20.5-201ENST00000516991 Q3C1V9 767 aa17.68■□□□□ 0.42
SCARNA20.5-201ENST00000516991 DNAJC2Q99543 621 aaKnown RBP17.68■□□□□ 0.42
SCARNA20.5-201ENST00000516991 MYH8P13535 1937 aa17.68■□□□□ 0.42
SCARNA20.5-201ENST00000516991 GOLIM4O00461 696 aa17.67■□□□□ 0.42
SCARNA20.5-201ENST00000516991 CACNB2Q08289 660 aaPredicted RBP17.67■□□□□ 0.42
SCARNA20.5-201ENST00000516991 C7orf61Q8IZ16 206 aa17.67■□□□□ 0.42
SCARNA20.5-201ENST00000516991 ACER1Q8TDN7 264 aa17.67■□□□□ 0.42
SCARNA20.5-201ENST00000516991 MCM9Q9NXL9 1143 aa17.67■□□□□ 0.42
SCARNA20.5-201ENST00000516991 IVNS1ABPQ9Y6Y0 642 aa17.67■□□□□ 0.42
SCARNA20.5-201ENST00000516991 ZNF532Q9HCE3 1301 aa17.67■□□□□ 0.42
SCARNA20.5-201ENST00000516991 ZNF236Q9UL36 1845 aa17.66■□□□□ 0.42
SCARNA20.5-201ENST00000516991 SLC15A5A6NIM6 579 aa17.66■□□□□ 0.42
SCARNA20.5-201ENST00000516991 APBB1O00213 710 aa17.66■□□□□ 0.42
SCARNA20.5-201ENST00000516991 CNMDO75829 334 aa17.66■□□□□ 0.42
SCARNA20.5-201ENST00000516991 MNX1P50219 401 aaPredicted RBP17.66■□□□□ 0.42
SCARNA20.5-201ENST00000516991 MFSD14CQ5VZR4 134 aa17.66■□□□□ 0.42
SCARNA20.5-201ENST00000516991 POTEEQ6S8J3 1075 aa17.66■□□□□ 0.42
SCARNA20.5-201ENST00000516991 RPAP3Q9H6T3 665 aaPredicted RBP17.66■□□□□ 0.42
SCARNA20.5-201ENST00000516991 ZBTB40Q9NUA8 1239 aa17.66■□□□□ 0.42
SCARNA20.5-201ENST00000516991 SWAP70Q9UH65 585 aa17.66■□□□□ 0.42
SCARNA20.5-201ENST00000516991 FRMPD3Q5JV73 1810 aa17.65■□□□□ 0.42
SCARNA20.5-201ENST00000516991 MYH7P12883 1935 aa17.65■□□□□ 0.42
SCARNA20.5-201ENST00000516991 TCRBV5S4A2TA0A5A2 114 aa17.65■□□□□ 0.42
SCARNA20.5-201ENST00000516991 SPDYE16A6NNV3 312 aaPredicted RBP17.65■□□□□ 0.42
SCARNA20.5-201ENST00000516991 GUCY1A2P33402 732 aa17.65■□□□□ 0.42
SCARNA20.5-201ENST00000516991 SEPT2Q15019 361 aa17.65■□□□□ 0.42
SCARNA20.5-201ENST00000516991 CCL14Q16627 93 aa17.65■□□□□ 0.42
SCARNA20.5-201ENST00000516991 WDR78Q5VTH9 848 aa17.65■□□□□ 0.42
SCARNA20.5-201ENST00000516991 TMEM179Q6ZVK1 233 aa17.65■□□□□ 0.42
SCARNA20.5-201ENST00000516991 EDC3Q96F86 508 aaKnown RBP17.65■□□□□ 0.42
SCARNA20.5-201ENST00000516991 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.65■□□□□ 0.42
SCARNA20.5-201ENST00000516991 DCP1AQ9NPI6 582 aaPredicted RBP17.65■□□□□ 0.42
SCARNA20.5-201ENST00000516991 A0A0G2JMZ2 1700 aa17.64■□□□□ 0.41
SCARNA20.5-201ENST00000516991 MPHOSPH10O00566 681 aaKnown RBP17.64■□□□□ 0.41
SCARNA20.5-201ENST00000516991 HOXC6P09630 235 aa17.64■□□□□ 0.41
SCARNA20.5-201ENST00000516991 PTPREP23469 700 aa17.64■□□□□ 0.41
SCARNA20.5-201ENST00000516991 BMP8BP34820 402 aa17.64■□□□□ 0.41
SCARNA20.5-201ENST00000516991 GRB14Q14449 540 aa17.64■□□□□ 0.41
SCARNA20.5-201ENST00000516991 LCORLQ8N3X6 602 aa17.64■□□□□ 0.41
SCARNA20.5-201ENST00000516991 SDR42E1Q8WUS8 393 aa17.64■□□□□ 0.41
SCARNA20.5-201ENST00000516991 SH2D4AQ9H788 454 aa17.64■□□□□ 0.41
SCARNA20.5-201ENST00000516991 ATP8A2Q9NTI2 1148 aa17.64■□□□□ 0.41
SCARNA20.5-201ENST00000516991 PAG1Q9NWQ8 432 aa17.64■□□□□ 0.41
SCARNA20.5-201ENST00000516991 STAP2Q9UGK3 403 aa17.64■□□□□ 0.41
SCARNA20.5-201ENST00000516991 COG6Q9Y2V7 657 aa17.64■□□□□ 0.41
SCARNA20.5-201ENST00000516991 MSCO60682 206 aa17.63■□□□□ 0.41
SCARNA20.5-201ENST00000516991 ATP5JP18859 108 aa17.63■□□□□ 0.41
SCARNA20.5-201ENST00000516991 CCND3P30281 292 aaPredicted RBP17.63■□□□□ 0.41
SCARNA20.5-201ENST00000516991 SIRT2Q8IXJ6 389 aa17.63■□□□□ 0.41
SCARNA20.5-201ENST00000516991 AMOTL1Q8IY63 956 aa17.63■□□□□ 0.41
SCARNA20.5-201ENST00000516991 LPAR1Q92633 364 aa17.63■□□□□ 0.41
SCARNA20.5-201ENST00000516991 GDF15Q99988 308 aa17.63■□□□□ 0.41
SCARNA20.5-201ENST00000516991 BTBD7Q9P203 1132 aa17.63■□□□□ 0.41
SCARNA20.5-201ENST00000516991 PFASO15067 1338 aa17.63■□□□□ 0.41
SCARNA20.5-201ENST00000516991 MBD4O95243 580 aa17.62■□□□□ 0.41
SCARNA20.5-201ENST00000516991 COL6A1P12109 1028 aa17.62■□□□□ 0.41
SCARNA20.5-201ENST00000516991 ADD2P35612 726 aa17.62■□□□□ 0.41
SCARNA20.5-201ENST00000516991 COG2Q14746 738 aa17.62■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 9.2 ms