RNA–Protein interactions for RNA: ENST00000515736.2

SFXN1-211, Transcript of sideroflexin 1, humanhuman

TSL 3

Gene SFXN1, Length 453 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-211ENST00000515736 CNTN3Q9P232 1028 aa10.04□□□□□ -0.8
SFXN1-211ENST00000515736 C4BP0C0L5 1744 aa10.04□□□□□ -0.8
SFXN1-211ENST00000515736 PALLDQ8WX93 1383 aa10.03□□□□□ -0.8
SFXN1-211ENST00000515736 GRIN3BO60391 1043 aa10.03□□□□□ -0.8
SFXN1-211ENST00000515736 GADD45BO75293 160 aaPredicted RBP10.03□□□□□ -0.8
SFXN1-211ENST00000515736 GNAI2P04899 355 aa10.03□□□□□ -0.8
SFXN1-211ENST00000515736 EPB42P16452 691 aa10.03□□□□□ -0.8
SFXN1-211ENST00000515736 HMGB2P26583 209 aaKnown RBP10.03□□□□□ -0.8
SFXN1-211ENST00000515736 TYRO3Q06418 890 aa10.03□□□□□ -0.8
SFXN1-211ENST00000515736 ARSJQ5FYB0 599 aaPredicted RBP10.03□□□□□ -0.8
SFXN1-211ENST00000515736 ANKRD45Q5TZF3 282 aa10.03□□□□□ -0.8
SFXN1-211ENST00000515736 ZNF530Q6P9A1 599 aaPredicted RBP10.03□□□□□ -0.8
SFXN1-211ENST00000515736 PRICKLE2Q7Z3G6 844 aa10.03□□□□□ -0.8
SFXN1-211ENST00000515736 SIRT2Q8IXJ6 389 aa10.03□□□□□ -0.8
SFXN1-211ENST00000515736 LINC00528Q8N1L1 170 aa10.03□□□□□ -0.8
SFXN1-211ENST00000515736 GPRASP2Q96D09 838 aa10.03□□□□□ -0.8
SFXN1-211ENST00000515736 TMA7Q9Y2S6 64 aaKnown RBP10.03□□□□□ -0.8
SFXN1-211ENST00000515736 AK9Q5TCS8 1911 aa10.03□□□□□ -0.8
SFXN1-211ENST00000515736 HEG1Q9ULI3 1381 aa10.02□□□□□ -0.8
SFXN1-211ENST00000515736 UBR3Q6ZT12 1888 aa10.02□□□□□ -0.8
SFXN1-211ENST00000515736 TLDC2A0PJX2 215 aa10.02□□□□□ -0.81
SFXN1-211ENST00000515736 XYLBO75191 536 aa10.02□□□□□ -0.81
SFXN1-211ENST00000515736 STK10O94804 968 aaKnown RBP10.02□□□□□ -0.81
SFXN1-211ENST00000515736 EGFRP00533 1210 aa10.02□□□□□ -0.81
SFXN1-211ENST00000515736 HSP90AB1P08238 724 aaKnown RBP10.02□□□□□ -0.81
SFXN1-211ENST00000515736 YBX3P16989 372 aaKnown RBP eCLIP10.02□□□□□ -0.81
SFXN1-211ENST00000515736 EIF4A1P60842 406 aaKnown RBP10.02□□□□□ -0.81
SFXN1-211ENST00000515736 GRM2Q14416 872 aa10.02□□□□□ -0.81
SFXN1-211ENST00000515736 FLAD1Q8NFF5 587 aa10.02□□□□□ -0.81
SFXN1-211ENST00000515736 RNF217Q8TC41 542 aa10.02□□□□□ -0.81
SFXN1-211ENST00000515736 BUD13Q9BRD0 619 aaKnown RBP eCLIP10.02□□□□□ -0.817e-7■□□□□ 10
SFXN1-211ENST00000515736 NOC4LQ9BVI4 516 aaKnown RBP10.02□□□□□ -0.81
SFXN1-211ENST00000515736 PIF1Q9H611 641 aa10.02□□□□□ -0.81
SFXN1-211ENST00000515736 ABI2Q9NYB9 513 aaPredicted RBP10.02□□□□□ -0.81
SFXN1-211ENST00000515736 A0A1B0GTH6 734 aa10.01□□□□□ -0.81
SFXN1-211ENST00000515736 RNMTO43148 476 aaKnown RBP10.01□□□□□ -0.81
SFXN1-211ENST00000515736 NCLP19338 710 aaKnown RBP10.01□□□□□ -0.81
SFXN1-211ENST00000515736 MSX1P28360 303 aa10.01□□□□□ -0.81
SFXN1-211ENST00000515736 GSTT1P30711 240 aa10.01□□□□□ -0.81
SFXN1-211ENST00000515736 VEGFBP49765 207 aa10.01□□□□□ -0.81
SFXN1-211ENST00000515736 KRT24Q2M2I5 525 aa10.01□□□□□ -0.81
SFXN1-211ENST00000515736 RASGRP4Q8TDF6 673 aa10.01□□□□□ -0.81
SFXN1-211ENST00000515736 SMARCC1Q92922 1105 aaPredicted RBP10.01□□□□□ -0.81
SFXN1-211ENST00000515736 PMEPA1Q969W9 287 aa10.01□□□□□ -0.81
SFXN1-211ENST00000515736 C22orf23Q9BZE7 217 aa10.01□□□□□ -0.81
SFXN1-211ENST00000515736 C11orf16Q9NQ32 467 aa10.01□□□□□ -0.81
SFXN1-211ENST00000515736 KBTBD4Q9NVX7 518 aa10.01□□□□□ -0.81
SFXN1-211ENST00000515736 A0A1W2PNR3 127 aa10□□□□□ -0.81
SFXN1-211ENST00000515736 CYP27B1O15528 508 aa10□□□□□ -0.81
SFXN1-211ENST00000515736 CDC45O75419 566 aa10□□□□□ -0.81
SFXN1-211ENST00000515736 KIAA0319Q5VV43 1072 aa10□□□□□ -0.81
SFXN1-211ENST00000515736 CASC1Q6TDU7 716 aa10□□□□□ -0.81
SFXN1-211ENST00000515736 LYSMD3Q7Z3D4 306 aa10□□□□□ -0.81
SFXN1-211ENST00000515736 GLIS3Q8NEA6 775 aa10□□□□□ -0.81
SFXN1-211ENST00000515736 HPS1Q92902 700 aa10□□□□□ -0.81
SFXN1-211ENST00000515736 CEP63Q96MT8 703 aa10□□□□□ -0.81
SFXN1-211ENST00000515736 RSRP1Q9BUV0 290 aa10□□□□□ -0.81
SFXN1-211ENST00000515736 ZSWIM4Q9H7M6 989 aa10□□□□□ -0.81
SFXN1-211ENST00000515736 DBF4Q9UBU7 674 aaPredicted RBP10□□□□□ -0.81
SFXN1-211ENST00000515736 UBR2Q8IWV8 1755 aa10□□□□□ -0.81
SFXN1-211ENST00000515736 AOX1Q06278 1338 aa10□□□□□ -0.81
SFXN1-211ENST00000515736 ANKRD62A6NC57 917 aa9.99□□□□□ -0.81
SFXN1-211ENST00000515736 BTBD11A6QL63 1104 aa9.99□□□□□ -0.81
SFXN1-211ENST00000515736 UPP2O95045 317 aa9.99□□□□□ -0.81
SFXN1-211ENST00000515736 TTC22Q5TAA0 569 aa9.99□□□□□ -0.81
SFXN1-211ENST00000515736 MEIS3Q99687 375 aa9.99□□□□□ -0.81
SFXN1-211ENST00000515736 OSBPL2Q9H1P3 480 aa9.99□□□□□ -0.81
SFXN1-211ENST00000515736 TIMMDC1Q9NPL8 285 aa9.99□□□□□ -0.81
SFXN1-211ENST00000515736 MIS18AQ9NYP9 233 aa9.99□□□□□ -0.81
SFXN1-211ENST00000515736 TTF2Q9UNY4 1162 aaKnown RBP9.99□□□□□ -0.81
SFXN1-211ENST00000515736 CD2APQ9Y5K6 639 aa9.99□□□□□ -0.81
SFXN1-211ENST00000515736 TNFRSF10AO00220 468 aa9.98□□□□□ -0.81
SFXN1-211ENST00000515736 EPB41L2O43491 1005 aaKnown RBP9.98□□□□□ -0.81
SFXN1-211ENST00000515736 RAB11FIP3O75154 756 aa9.98□□□□□ -0.81
SFXN1-211ENST00000515736 ALDH1L1O75891 902 aa9.98□□□□□ -0.81
SFXN1-211ENST00000515736 CES1P23141 567 aa9.98□□□□□ -0.81
SFXN1-211ENST00000515736 ATP8B2P98198 1209 aa9.98□□□□□ -0.81
SFXN1-211ENST00000515736 HSP90AB4PQ58FF6 505 aa9.98□□□□□ -0.81
SFXN1-211ENST00000515736 G2E3Q7L622 706 aa9.98□□□□□ -0.81
SFXN1-211ENST00000515736 C3orf58Q8NDZ4 430 aa9.98□□□□□ -0.81
SFXN1-211ENST00000515736 SNX21Q969T3 373 aa9.98□□□□□ -0.81
SFXN1-211ENST00000515736 HYPKQ9NX55 129 aa9.98□□□□□ -0.81
SFXN1-211ENST00000515736 TMOD3Q9NYL9 352 aa9.98□□□□□ -0.81
SFXN1-211ENST00000515736 DDX58O95786 925 aaKnown RBP9.97□□□□□ -0.81
SFXN1-211ENST00000515736 UBTFL1P0CB47 393 aaPredicted RBP9.97□□□□□ -0.81
SFXN1-211ENST00000515736 TTC39BQ5VTQ0 682 aaPredicted RBP9.97□□□□□ -0.81
SFXN1-211ENST00000515736 SLC4A10Q6U841 1118 aa9.97□□□□□ -0.81
SFXN1-211ENST00000515736 SMIM5Q71RC9 77 aa9.97□□□□□ -0.81
SFXN1-211ENST00000515736 IFNL2Q8IZJ0 200 aa9.97□□□□□ -0.81
SFXN1-211ENST00000515736 ZNF526Q8TF50 670 aaPredicted RBP9.97□□□□□ -0.81
SFXN1-211ENST00000515736 PIGBQ92521 554 aa9.97□□□□□ -0.81
SFXN1-211ENST00000515736 AFDNP55196 1824 aaKnown RBP9.96□□□□□ -0.81
SFXN1-211ENST00000515736 LOC102724428A0A0B4J2F2 783 aa9.96□□□□□ -0.82
SFXN1-211ENST00000515736 A0A1W2PP55 124 aa9.96□□□□□ -0.82
SFXN1-211ENST00000515736 CAPN5O15484 640 aaPredicted RBP9.96□□□□□ -0.82
SFXN1-211ENST00000515736 SIK1P57059 783 aa9.96□□□□□ -0.82
SFXN1-211ENST00000515736 ZNF662Q6ZS27 426 aa9.96□□□□□ -0.82
SFXN1-211ENST00000515736 DNAAF4Q8WXU2 420 aa9.96□□□□□ -0.82
SFXN1-211ENST00000515736 SEC16BQ96JE7 1060 aa9.96□□□□□ -0.82
SFXN1-211ENST00000515736 DCAF5Q96JK2 942 aa9.96□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms